Paper · 2026 · Plant Physiology and Biochemistry

Integrated volatilomic and transcriptomic analysis revealed the dynamic formation of floral scent in Hemerocallis fulva ‘Shaman’

Wenjie Gao; Zhiwei Fu; Kun He; et al.

9
claims
18
verbatim quotes
0
citations
3
research areas
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Open access · cc-by-nc

Abstract

Floral scent research in Hemerocallis remains limited despite its ornamental and edible value. In this study, the aromatic cultivar Hemerocallis fulva ‘Shaman’ was used to investigate the volatile organic compounds (VOCs) in petals across the initial, full, and final flowering stages. Metabolomic profiling combined with transcriptomic analysis via RNA sequencing was further performed to elucidate the dynamic changes in scent constituents and their underlying genetic regulation. A total of 131 VOCs were identified, with terpenoids, alcohols, and esters representing the dominant chemical classes. Twelve key aroma-active compounds, including phenethyl alcohol, linalool, ( E )-β-ocimene, farnesene, nerolidyl acetate, α-pinene, nerol, irione, (2-nitroethyl)benzene, 3-furanmethanol, nonanal, and methyl palmitate, were further identified, defining a volatile profile characterized by floral, fruity, and fresh fatty notes. Transcriptomic analysis revealed 15,189 differentially expressed genes, which were significantly enriched in metabolic pathways related to terpenoids, phenylpropanoids, and fatty acid derivatives. Within these pathways, key structural gene modules were identified, including DXS / FPPS / TPS for terpenoids, PAL / 4CL / CAD for phenylpropanoids, and LOX / ADH / AAT for fatty acid derivatives, each showing strong temporal correlation with the accumulation of their corresponding volatiles. Additionally, from 2,547 predicted transcription factors (TFs), 58 candidate regulators closely associated with the 12 key volatiles were identified, with bHLH (9), MYB (7), AP2/ERF (6), NAC (5), and WRKY (4) families prominently represented. This study systematically uncovered the dynamic variation of floral scent components and identified key structural gene modules and candidate TFs associated with their biosynthesis, providing a foundation for understanding aroma formation in Hemerocallis and supporting future molecular breeding of fragrant cultivars. • Terpenoids and phenylpropanoids dominated the floral scent at full bloom. • Floral scent transitioned to fatty-acid derivatives during senescence. • DXS-FPPS-TPS and PAL-CAD gene modules correlated with stage-specific volatiles. • bHLH, MYB, NAC, and WRKY transcription factors coordinated scent biosynthesis. • Integrated metabolite-gene-TF framework assisted aromatic Hemerocallis breeding.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

The petals contained 131 identified VOCs, dominated by terpenoids, alcohols and esters.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Outcome
VOCse0
Value
131 VOCse0
Qualifier
terpenoids, alcohols, and esterse0

Not reportedOrgan / stage

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“A total of 131 VOCs were identified, with terpenoids, alcohols, and esters representing the dominant chemical classes.”

✓ located verbatim in the source · abstract, characters 483–601 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Twelve key aroma-active compounds defined a floral, fruity and fresh fatty volatile profile.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Outcome
key aroma-active compoundse0
Value
Twelvee0
Qualifier
floral, fruity, and fresh fatty notese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“Twelve key aroma-active compounds, including phenethyl alcohol, linalool, ( E )-β-ocimene, farnesene, nerolidyl acetate, α-pinene, nerol, irione, (2-nitroethyl)benzene, 3-furanmethanol, nonanal, and methyl palmitate, were further identified, defining a volatile profile characterized by floral, fruity, and fresh fatty notes.”

✓ located verbatim in the source · abstract, characters 602–927 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Transcriptomic analysis found 15,189 differentially expressed genes enriched in pathways related to terpenoids, phenylpropanoids and fatty acid derivatives.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Outcome
differentially expressed genese0
Value
15,189e0
Qualifier
metabolic pathways related to terpenoids, phenylpropanoids, and fatty acid derivativese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“Transcriptomic analysis revealed 15,189 differentially expressed genes, which were significantly enriched in metabolic pathways related to terpenoids, phenylpropanoids, and fatty acid derivatives.”

✓ located verbatim in the source · abstract, characters 928–1124 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

DXS / FPPS / TPS structural gene modules correlated temporally with corresponding terpenoid volatiles.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Gene
DXS / FPPS / TPSe0
Outcome
accumulation of their corresponding volatilese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“DXS / FPPS / TPS for terpenoids, PAL / 4CL / CAD for phenylpropanoids, and LOX / ADH / AAT for fatty acid derivatives, each showing strong temporal correlation with the accumulation of their corresponding volatiles.”

✓ located verbatim in the source · abstract, characters 1203–1418 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

PAL / 4CL / CAD structural gene modules correlated temporally with corresponding phenylpropanoid volatiles.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Gene
PAL / 4CL / CADe0
Outcome
accumulation of their corresponding volatilese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“PAL / 4CL / CAD for phenylpropanoids, and LOX / ADH / AAT for fatty acid derivatives, each showing strong temporal correlation with the accumulation of their corresponding volatiles.”

✓ located verbatim in the source · abstract, characters 1236–1418 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

LOX / ADH / AAT structural gene modules correlated temporally with corresponding fatty acid derivative volatiles.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Gene
LOX / ADH / AATe0
Outcome
accumulation of their corresponding volatilese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“LOX / ADH / AAT for fatty acid derivatives, each showing strong temporal correlation with the accumulation of their corresponding volatiles.”

✓ located verbatim in the source · abstract, characters 1278–1418 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Among 2,547 predicted transcription factors, 58 candidate regulators were closely associated with 12 key volatiles.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Gene
candidate regulatorse0
Outcome
closely associated with the 12 key volatilese0
Value
58e0
Qualifier
2,547 predicted transcription factors (TFs)e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“from 2,547 predicted transcription factors (TFs), 58 candidate regulators closely associated with the 12 key volatiles were identified, with bHLH (9), MYB (7), AP2/ERF (6), NAC (5), and WRKY (4) families prominently represented.”

✓ located verbatim in the source · abstract, characters 1433–1661 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Terpenoids and phenylpropanoids dominated floral scent at full bloom.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Organ / stage
full bloome0
Outcome
Terpenoids and phenylpropanoids dominated the floral scente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“Terpenoids and phenylpropanoids dominated the floral scent at full bloom.”

✓ located verbatim in the source · abstract, characters 1983–2056 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Floral scent shifted to fatty-acid derivatives during senescence.

Taxon
Hemerocallis fulva ‘Shaman’Hemerocallis fulvat0
Organ / stage
senescencee0
Outcome
Floral scent transitioned to fatty-acid derivativese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Hemerocallis fulva ‘Shaman’”

✓ located verbatim in the source · title, characters 101–128 · show in text ↑
e0

“Floral scent transitioned to fatty-acid derivatives during senescence.”

✓ located verbatim in the source · abstract, characters 2059–2129 · show in text ↑