Paper · 2026 · Communications Biology

Single-cell transcriptome sequencing (ScRNA-seq) uncovers the regulatory role of lodicule cells in rice floret opening (FO)

Zhiqiang Yan; Ruyue Deng; Huihui Tang

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verbatim quotes
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citations
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Open access · cc-by-nc-nd

Abstract

Floret opening (FO) in rice (Oryza sativa L.) is triggered by lodicule swelling. However, the regulatory mechanisms underlying lodicule-mediated FO remain largely unclear. In particular, it is unknown whether distinct floral cell types coordinately regulate lodicule osmotic potential and cell wall remodeling. To address this question, we performed single-cell transcriptome sequencing on spikelets sampled at pre-floret opening and FO stages. This study demonstrates strong communication between phloem and lodicule cells during FO, potentially involving transport of calcium ions, soluble sugars, and water. These osmolytes contribute to lowering lodicule osmotic potential, thereby facilitating swelling. Multiple FO genes involved in lodicule cell wall remodeling showed heterogeneous activation in lodicule cells, suggesting fine regulation of cell wall remodeling and cell deformation. Together, these findings provide single-cell insights into lodicule control of FO. In addition, we identified multiple FO regulators, providing genetic resources for improving FO.

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Claims 5

Observationobservedoriginal resultmeasured

Claim · model-written summary

Single-cell transcriptome data showed strong communication between phloem and lodicule cells during rice floret opening.

Organ / stage
lodicule cellse0
Outcome
strong communication between phloem and lodicule cellse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice floret opening”

✓ located verbatim in the source · title, characters 99–118 · show in text ↑
e0

“strong communication between phloem and lodicule cells during FO”

✓ located verbatim in the source · abstract, characters 469–533 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The communication between phloem and lodicule cells potentially involves transport of calcium ions, soluble sugars and water.

Compound
calcium ions, soluble sugars, and watere0
Outcome
communication between phloem and lodicule cellse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice floret opening”

✓ located verbatim in the source · title, characters 99–118 · show in text ↑
e0

“strong communication between phloem and lodicule cells during FO, potentially involving transport of calcium ions, soluble sugars, and water”

✓ located verbatim in the source · abstract, characters 469–609 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The osmolytes contribute to lowering lodicule osmotic potential, thereby facilitating lodicule swelling.

Compound
osmolytese0
Outcome
lowering lodicule osmotic potentiale0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice floret opening”

✓ located verbatim in the source · title, characters 99–118 · show in text ↑
e0

“These osmolytes contribute to lowering lodicule osmotic potential, thereby facilitating swelling”

✓ located verbatim in the source · abstract, characters 611–707 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Multiple floret-opening genes involved in lodicule cell wall remodeling showed heterogeneous activation in lodicule cells.

Organ / stage
lodicule cellse0
Gene
FO genese0
Outcome
heterogeneous activatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice floret opening”

✓ located verbatim in the source · title, characters 99–118 · show in text ↑
e0

“Multiple FO genes involved in lodicule cell wall remodeling showed heterogeneous activation in lodicule cells”

✓ located verbatim in the source · abstract, characters 709–818 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Multiple floret-opening regulators were identified in rice.

Outcome
multiple FO regulatorse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice floret opening”

✓ located verbatim in the source · title, characters 99–118 · show in text ↑
e0

“we identified multiple FO regulators”

✓ located verbatim in the source · abstract, characters 989–1025 · show in text ↑