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“phenotypically similar”

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Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

The weak agap mutant was phenotypically similar to knr6.

Taxon: maizeZea mayse0
Treatment: weak agap mutante3
Outcome: phenotypicallye3
Direction: similare3
Comparator: knr6e3

Verbatim

e0
“ear inflorescences of maize (Zea mays L.)”
✓ located verbatim in the source · abstract, characters 224–265

e3
“The weak agap mutant was phenotypically similar to knr6, showing short ears with fewer kernels”
✓ located verbatim in the source · abstract, characters 870–964

Title

The Coordinated KNR6–AGAP–ARF1 Complex Modulates Vegetative and Reproductive Traits by Participating in Vesicle Trafficking in Maize

Manfei Li; Ran Zhao; Yanfang Du; et al. Cells 2021. doi:10.3390/cells10102601

Other claims from this paper (10)

Intervention effect The loss-of-function AGAP mutant had a defective Golgi apparatus with thin and compact cisternae.
Intervention effect The loss-of-function AGAP mutant had delayed internalization.
Intervention effect The loss-of-function AGAP mutant repressed vesicle agglomeration.
Intervention effect The loss-of-function AGAP mutant had defective inflorescences and roots.
Intervention effect The loss-of-function AGAP mutant produced dwarfed plants with small leaves.
Observation AGAP was preferentially localized to the Golgi apparatus.
Intervention effect The weak agap mutant had short ears.
Intervention effect The weak agap mutant had fewer kernels.
Observation AGAP interacted with KNR6.
Intervention effect The agap knr6 double mutant had shorter inflorescence meristems and mature ears than the single mutants.

Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

IlSVP-overexpressing plants resembled wild type phenotypically.

Taxon: ArabidopsisArabidopsise1
Treatment: overexpressing IlSVPe0
Gene: IlSVPe0
Outcome: phenotypically similare0
Direction: similare0
Comparator: wild typee0

Verbatim

e0
“plants overexpressing IlSVP were phenotypically similar to that of wild type”
✓ located verbatim in the source · abstract, characters 1324–1400

e1
“Ectopic expression of IlSEP3 in Arabidopsis”
✓ located verbatim in the source · abstract, characters 1083–1126

t0
“Iris laevigata”
✓ located verbatim in the source · title, characters 52–66

Title

Identification of MADS-Box Transcription Factors in Iris laevigata and Functional Assessment of IlSEP3 and IlSVP during Flowering

Guiling Liu; Fengyi Li; Gongfa Shi; et al. International Journal of Molecular Sciences 2022. doi:10.3390/ijms23179950

Other claims from this paper (8)

Method / resource Transcriptome data revealed 41 putative MADS-box genes.
Observation Eight type I MADS-box members were identified.
Observation Thirty-three type II MADS-box members were identified.
Observation IlSEP3 and IlSVP localized to the nucleus.
Association IlSEP3 and IlSVP physically interacted in vitro.
Intervention effect Ectopic IlSEP3 expression advanced flowering in Arabidopsis to 32 days versus 36 days in controls.
Mechanism The authors proposed that IlSEP3 effects on flowering could involve expression of seven flowering genes.
Mechanism The authors inferred that IlSEP3 regulates flowering in Iris laevigata.

Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

ravl1/d61-1 resembled ravl1 phenotypically.

Taxon: riceOryza sativat0
Material: ravl1/d61-1e0
Outcome: phenotypically similare0
Comparator: ravl1 mutante0

Verbatim

e0
“The double mutant ravl1/d61-1 was phenotypically similar to the ravl1 mutant.”
✓ located verbatim in the source · abstract, characters 510–587

t0
“Rice”
✓ located verbatim in the source · title, characters 105–109

Title

RAVL1 Activates Brassinosteroids and Ethylene Signaling to Modulate Response to Sheath Blight Disease in Rice

De Peng Yuan; Chong Zhang; Zi Yuan Wang; et al. Phytopathology 2018. doi:10.1094/phyto-03-18-0085-r

Other claims from this paper (8)

Observation d61-1 and d2 mutants were less susceptible than wild type.
Observation bri1-D was more susceptible than wild type.
Observation ravl1 and d61-1/EIL1 Ri5 were similarly susceptible to wild type.
Mechanism RAVL1 may directly activate EIL1.
Observation ers1 and d61-1/RAVL1 OX mutants resisted sheath blight.
Observation EIL1 RNAi mutants and RAVL1 OX were more susceptible than wild type.
Mechanism RAVL1 activates BRI1/D2 independently of BR signaling.
Mechanism RAVL1 activates EIL1 independently of ethylene signaling.

Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Type 2 plants resembled wild type phenotypically.

Taxon: riceOryza sativat0
Material: Type 2e0
Outcome: similar phenotypes to WTe0
Direction: similare0

Verbatim

e0
“Type 2 had similar phenotypes to WT”
✓ located verbatim in the source · abstract, characters 3917–3952

t0
“rice”
✓ located verbatim in the source · title, characters 44–48

Title

Production of novel beneficial alleles of a rice yield‐related QTL by CRISPR/Cas9

Yongtao Cui; Xingming Hu; Guohua Liang; et al. Plant Biotechnology Journal 2020. doi:10.1111/pbi.13370

Other claims from this paper (19)

Association Three QTLs were associated with stem cross-section area.
Association Nipponbare alleles at qSCSA1-1 and qSCSA6-1 increased SCSA.
Association The 93-11 allele at qSCSA3-1 increased culm strength.
Observation qSCSA3-1 mapped to a 51-kb region containing OsTB1.
Observation OsTB1 expression in 93-11 inflorescences exceeded that in NPB and NIL-93-11.
Intervention effect Introgression of the NPB allele decreased bending stress.
Intervention effect Introgression of the NPB allele decreased stem area and spikelets per panicle.
Intervention effect Introgression of the NPB allele increased tiller number.
Intervention effect Introgression of the NPB allele did not affect plant height.
Intervention effect The OsTB1 null mutant had lower bending stress than rescued plants.
Intervention effect The OsTB1 null mutant had smaller panicles than rescued plants.
Intervention effect The OsTB1 null mutant had increased tiller number relative to rescued plants.
Observation Four large-SCSA varieties carried a TGTG insertion.
Method / resource Editing generated 23 rice plants with nine mutations.
Intervention effect Type 1 plants had more tillers and smaller culms and panicles than wild type.
Intervention effect Type 3 plants had fewer tillers and larger culms and panicles than wild type.
Intervention effect Type 3 edits increased OsTB1 expression.
Intervention effect Type 1 edits reduced OsTB1 expression.
Intervention effect Type 2 edits left OsTB1 expression unchanged.

Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

The leaf abnormality is not allelic to the previously reported abnormal palisade mutant.

Taxon: Gossypium hirsutumGossypium hirsutumt0
Outcome: allelisme3
Comparator: abnormal palisade mutante3

Verbatim

t0
“Gossypium hirsutum L.”
✓ located verbatim in the source · title, characters 71–92

e3
“We tested for allelism between the leaf abnormality and the previously reported abnormal palisade mutant (because they were phenotypically similar) but they were not allelic”
✓ located verbatim in the source · abstract, characters 416–589

Title

A Leaf Abnormality for the Identification of a Genetic Male Sterile in Gossypium hirsutum L.¹

J. E. Quisenberry; R. J. Kohel Crop Science 1968. doi:10.2135/cropsci1968.0011183x000800030031x

Other claims from this paper (4)

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“phenotypically similar”

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