Search claims · PlantClaims

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

A multi-SNP model gained power over SNP-by-SNP approaches for berry weight.

Taxon: grapevineVitist0
Outcome: powere0
Direction: gaine0
Value: gain in powere0
Comparator: SNP-by-SNP approachese0

Verbatim

e0
“compared with SNP-by-SNP approaches, a multi-SNP statistical model led to a gain in power”
✓ located verbatim in the source · abstract, characters 1187–1276

t0
“grapevine”
✓ located verbatim in the source · title, characters 43–52

Title

Genome-wide association study of a diverse grapevine panel: example of berry weight

T. Flutre; R. Bacilieri; I. Bécavin; et al. Acta Horticulturae 2019. doi:10.17660/actahortic.2019.1248.33

Other claims from this paper (2)

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The linkage map included 575 SNP-SNP markers assigned to subgenome affinities.

Taxon: Fragaria ×ananassaFragaria ×ananassat0
Outcome: subgenome affinities assigned SNP-SNP markerse0
Value: 575 subgenome affinities assigned SNP-SNP markerse0

Verbatim

e0
“which included 575 subgenome affinities assigned SNP-SNP markers”
✓ located verbatim in the source · abstract, characters 2094–2158

t0
“cultivated octoploid strawberry Fragaria ×ananassa”
✓ located verbatim in the source · abstract, characters 4–54

Title

INVESTIGATION OF SUBGENOME COMPOSITION IN OCTOPLOID STRAWBERRIES

Yilong Yang University of New Hampshire Scholars Repository (University of New Hampshire at Manchester) 2016

Other claims from this paper (14)

Observation F. vesca and F. iinumae were confirmed as diploid progenitors of the octoploids.
Observation Phylogenetic trees suggested more than two subgenome types.
Observation Phylogenetic evidence suggested possible F. viridis contribution to octoploid alleles.
Observation Phylogenetic evidence suggested possible F. bucharica contribution to octoploid alleles.
Method / resource A cultivated strawberry linkage map contained 8,407 SNP markers.
Observation Subgenomes from F. vesca, F. iinumae or unknown sources were identified.
Method / resource The pentaploid linkage map included 4,153 SNP markers.
Method / resource The pentaploid linkage map spanned 2,218.52 cM.
Method / resource The pentaploid linkage map had 26 linkage groups.
Method / resource A total of 2,748 markers were classified into subgenome identity categories.
Observation Linkage groups dominated by F. vesca-like and F. iinumae-like markers were identified.
Observation Unknown category markers were identified, with unclear distribution among linkage groups.
Observation The approaches indicated at least three diploid ancestors contributed subgenomes.
Observation The phylogenetic approach suggested distinctions between F. virginiana and F. chiloensis.

Associationobservedoriginal resultmeasured

Claim · model-written summary

Biochemical changes under BA plus SNP or NAA plus SNP depended on SNP concentration and genotype.

Taxon: cherry rootstockst0
Treatment: BA + SNP or NAA + SNPe0
Outcome: changes in biochemical constituentse0
Qualifier: SNP concentrations and genotypese0

Not reportedDirection

Verbatim

t0
“cherry rootstocks”
✓ located verbatim in the source · title, characters 100–117

e0
“In BA + SNP or NAA + SNP treatments, changes in biochemical constituents were dependent on SNP concentrations and genotypes.”
✓ located verbatim in the source · abstract, characters 1156–1280

Title

Effect of sodium nitroprusside on micropropagation and biochemicalparameters of CAB-6P and Gisela 6 cherry rootstocks

Virginia SARROPOULOU; Kortessa DIMASSI-THERIOU; Ioan THERIOS TURKISH JOURNAL OF BIOLOGY 2015. doi:10.3906/biy-1409-68

Other claims from this paper (15)

Intervention effect BA and SNP reduced shoot multiplication in CAB-6P.
Intervention effect BA plus 30 micromolar SNP gave Gisela 6 the highest average shoot number of 4.15.
Intervention effect BA plus 30 micromolar SNP gave Gisela 6 a maximum multiplication percentage of 100%.
Intervention effect NAA plus 30 micromolar SNP maximized CAB-6P root number at 13.79.
Intervention effect NAA plus 30 micromolar SNP maximized CAB-6P fresh weight at 0.336 g.
Intervention effect NAA plus 40 micromolar SNP gave CAB-6P the greatest average root length, 82 mm.
Intervention effect NAA plus 10 micromolar SNP gave CAB-6P the greatest rooting percentage, 95.45%.
Intervention effect NAA plus 40 micromolar SNP gave Gisela 6 the highest root number, 9.75.
Intervention effect NAA plus 40 micromolar SNP gave Gisela 6 the highest fresh weight, 0.238 g.
Intervention effect NAA plus 30 micromolar SNP maximized Gisela 6 root length at 30.77 mm.
Intervention effect NAA alone gave Gisela 6 the greatest rooting percentage, 84.62%.
Intervention effect SNP alone reduced CAB-6P leaf chlorophyll, carbohydrate and pr?line levels.
Intervention effect 30?50 micromolar SNP increased Gisela 6 leaf chlorophyll.
Intervention effect SNP augmented leaf carbohydrate and proline content.
Intervention effect SNP diminished root carbohydrate content.

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Two novel SNP markers, SNP_badh2-E2 and SNP_badh2-E7, were developed for the badh2 alleles in rice.

Taxon: riceOryza sativat0
Gene: SNP_badh2-E2 and SNP_badh2-E7e2
Outcome: SNP molecular markerse2
Value: twoe2

Verbatim

t0
“functional molecular markers of BADH2 in rice”
✓ located verbatim in the source · title, characters 41–86

e2
“We developed two novel SNP molecular markers, SNP_badh2-E2 and SNP_badh2-E7, related to the alleles”
✓ located verbatim in the source · abstract, characters 853–952

Title

Development and application of two novel functional molecular markers of BADH2 in rice

Wenbo Li; Xiuhong Zeng; Shuanglan Li; et al. Electronic Journal of Biotechnology 2020. doi:10.1016/j.ejbt.2020.04.004

Other claims from this paper (5)

Observationobservedoriginal resultmeasured

Claim · model-written summary

SNP frequency in resistance linked STSs was preliminarily estimated from 1(SNP)/116bp to 1(SNP)/266bp.

Taxon: barleyHordeum vulgaree1
Outcome: variation of SNPfrequencye0
Value: 1(SNP)/116bp to 1(SNP)/266bpe0
Qualifier: preliminarye0

Verbatim

e0
“variation of SNPfrequency in the respective STSs was preliminary estimated at 1(SNP)/116bp to 1(SNP)/266bp”
✓ located verbatim in the source · abstract, characters 1158–1264

e1
“barley genome”
✓ located verbatim in the source · abstract, characters 132–145

Title

Erste Ergebnisse zur SNP-Detektion in Fragmenten mit Kopplung zu Resistenzgenen gegen die Gelbmosaikvirose

Neuhaus, Gisela; Werner, Kay; Weyen, J.; et al. OpenAgrar 2003

Other claims from this paper (1)

Method / resource The SNPs formed different haplotypes that facilitate diagnostic marker development.

Observationobservedoriginal resultmeasured

Claim · model-written summary

36,442,756 SNP-SNP interaction pairs were detected for soybean oil content.

Taxon: SoybeanGlycine maxe0
Outcome: SNP-SNP interaction pairse1
Value: 36,442,756e1

Verbatim

e0
“Soybean oil content is one of main quality traits”
✓ located verbatim in the source · abstract, characters 0–49

e1
“In total, 36,442,756 SNP-SNP interaction pairs were detected”
✓ located verbatim in the source · abstract, characters 323–383

Title

SNP-SNP Interaction Analysis on Soybean Oil Content under Multi-Environments

Qingshan Chen; Xinrui Mao; Zhanguo Zhang; et al. PLoS ONE 2016. doi:10.1371/journal.pone.0163692

Other claims from this paper (6)

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Exogenous SNP decreased SOD, CAT and POX activities in both SNP and Pb plus SNP treatments.

Taxon: Vigna radiataVigna radiatat0
Treatment: exogenous SNPe0
Outcome: activities of superoxide dismutase (SOD), catalase (CAT) and peroxidase (POX)e0
Direction: decreasede0
Qualifier: single (SNP) and SNP combined with Pb (Pb+SNP) treatmente0

Not reportedComparator

Verbatim

e0
“exogenous SNP decreased the activities of superoxide dismutase (SOD), catalase (CAT) and peroxidase (POX) in single (SNP) and SNP combined with Pb (Pb+SNP) treatment”
✓ located verbatim in the source · abstract, characters 878–1043

t0
“Vigna radiata”
✓ located verbatim in the source · title, characters 36–49

Title

Oxidative stress induced by lead in Vigna radiata L. seedling attenuated by exogenous nitric oxide

Himani Singh; N. B. Singh; Ajey Singh; et al. Tropical Plant Research 2017. doi:10.22271/tpr.2017.v4.i2.031

Other claims from this paper (6)

Intervention effect Lead toxicity reduced seedling growth most at the highest concentrations.
Intervention effect Sodium nitroprusside pretreatment mitigated lead-related growth harm.
Intervention effect Lead oxidative stress elevated seedling MDA content.
Intervention effect Nitric oxide decreased MDA content in lead-treated seedlings.
Intervention effect Lead exposure enhanced antioxidant enzyme activities in seedlings.
Intervention effect SNP enhanced plant tolerance to lead toxicity.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Two SNP-SNP interaction pairs were stable across 12 environments.

Taxon: SoybeanGlycine maxe0
Outcome: SNP-SNP interaction pairse3
Value: Twoe3
Qualifier: stable across 12e3

Verbatim

e0
“Soybean oil content is one of main quality traits”
✓ located verbatim in the source · abstract, characters 0–49

e3
“Two and 1863 SNP-SNP interaction pairs detected stable across 12 and 11 environments, respectively”
✓ located verbatim in the source · abstract, characters 544–642

Title

SNP-SNP Interaction Analysis on Soybean Oil Content under Multi-Environments

Qingshan Chen; Xinrui Mao; Zhanguo Zhang; et al. PLoS ONE 2016. doi:10.1371/journal.pone.0163692

Other claims from this paper (6)

Observationobservedoriginal resultmeasured

Claim · model-written summary

1863 SNP-SNP interaction pairs were stable across 11 environments.

Taxon: SoybeanGlycine maxe0
Outcome: SNP-SNP interaction pairse3
Value: 1863e3
Qualifier: stable across 12 and 11 environmentse3

Verbatim

e0
“Soybean oil content is one of main quality traits”
✓ located verbatim in the source · abstract, characters 0–49

e3
“Two and 1863 SNP-SNP interaction pairs detected stable across 12 and 11 environments, respectively”
✓ located verbatim in the source · abstract, characters 544–642

Title

SNP-SNP Interaction Analysis on Soybean Oil Content under Multi-Environments

Qingshan Chen; Xinrui Mao; Zhanguo Zhang; et al. PLoS ONE 2016. doi:10.1371/journal.pone.0163692

Other claims from this paper (6)

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The PolyHighResolution SNP rate was 79.79%, superior to other crop SNP arrays.

Outcome: PolyHighResolution SNP ratee0
Value: 79.79 %e0
Comparator: other crop SNP arrayse0

Verbatim

e0
“a superior PolyHighResolution SNP rate (79.79 %) compared to other crop SNP arrays”
✓ located verbatim in the source · abstract, characters 816–898

Title

A high-resolution 20K SNP array for comprehensive genotyping and genetic mapping in Nicotiana tabacum L.

Shizhou Yu; Zhixiao Yang; Jie Zhang; et al. The Crop Journal 2025. doi:10.1016/j.cj.2024.12.015

Other claims from this paper (6)

Method / resource The tobacco array includes 20,213 unique SNPs covering over 90% of the genome.
Method / resource The array achieved high SNP call rates of 93.6%–99.8%.
Method / resource The array had a technical error rate below 1%.
Observation Population analysis found two major foreign germplasm introductions influencing Chinese tobacco genetic diversity.
Method / resource A GWAS identified 62 genes linked to eight agronomic traits.
Method / resource A genetic map comprised 4553 SNPs across 6606.08 cM.

“SNP”

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