By interacting organism › Bacteria › Acholeplasmataceae › Candidatus Phytoplasma ulmi

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

All symptomatic elm trees tested were infected with Ca. Phytoplasma ulmi.

Taxon: Ulmus spp.Ulmust0
Interactor: ‘Ca. Phytoplasma ulmi’Candidatus Phytoplasma ulmie0pathogen
Outcome: symptomatic elm trees tested were infectede0

Verbatim

e0
“All the symptomatic elm trees tested were infected with ‘Ca. Phytoplasma ulmi’.”
✓ located verbatim in the source · abstract, characters 493–572

t0
“Detection and Multigene Characterization of ‘Candidatus Phytoplasma ulmi’ Strains Infecting Ulmus spp. in Southern Italy”
✓ located verbatim in the source · title, characters 0–120

Title

Detection and Multigene Characterization of ‘Candidatus Phytoplasma ulmi’ Strains Infecting Ulmus spp. in Southern Italy

Carmine Marcone; Carmine Palmieri; Aniello Cuomo Forests 2024. doi:10.3390/f15122067

Other claims from this paper (4)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Sequence analysis confirmed Polish phytoplasma isolates as Candidatus Phytoplasma ulmi.

Taxon: elmt0
Interactor: Candidatus Phytoplasma ulmiCandidatus Phytoplasma ulmie0pathogen
Gene: rpl22 ‐ rps3 and secYe0
Outcome: affiliation of the phytoplasma isolatese0
Setting: Polande0

Not reportedDirection

Verbatim

e0
“Sequence analyses of less conservative genes rpl22 ‐ rps3 and secY confirmed the affiliation of the phytoplasma isolates found in Poland to ‘ Candidatus Phytoplasma ulmi’”
✓ located verbatim in the source · abstract, characters 1145–1315

t0
“elm”
✓ located verbatim in the source · title, characters 94–97

Title

Multigene characterization of ' Candidatus Phytoplasma ulmi'‐related isolates associated with elm yellows disease of Ulmus minor Mill. in Poland

Mirosława Cieślińska; Klaudia Krajciczek; Anna Pałka Forest Pathology 2022. doi:10.1111/efp.12734

Other claims from this paper (5)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Groel sequences of Candidatus Phytoplasma ulmi in elm show a high intraspecific homology of more than 99%.

Taxon: elme1
Interactor: Candidatus Phytoplasma ulmiCandidatus Phytoplasma ulmie1pathogen
Outcome: intraspecific homologye2
Value: more than 99%e2

Verbatim

e1
“A recent survey in Germany revealed the wide presence of 'Candidatus Phytoplasma ulmi' in native elm stands”
✓ located verbatim in the source · abstract, characters 0–107

e2
“While the groEL sequences revealed a high intraspecific homology of more than 99%”
✓ located verbatim in the source · abstract, characters 249–330

Title

Genetic variation, phylogenetic relationship and spatial distribution of ‘Candidatus Phytoplasma ulmi’ strains in Germany

B. Schneider; B. Hüttel; C. Zübert; et al. Scientific Reports 2020. doi:10.1038/s41598-020-78745-w

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

The imp gene homology of Candidatus Phytoplasma ulmi in elm dropped to 71% between distantly related sequences.

Taxon: elme1
Interactor: Candidatus Phytoplasma ulmiCandidatus Phytoplasma ulmie1pathogen
Outcome: homology of the imp genee3
Direction: droppede3
Value: 71%e3

Verbatim

e1
“A recent survey in Germany revealed the wide presence of 'Candidatus Phytoplasma ulmi' in native elm stands”
✓ located verbatim in the source · abstract, characters 0–107

e3
“the homology of the imp gene dropped to 71% between distantly related sequences”
✓ located verbatim in the source · abstract, characters 332–411

Title

Genetic variation, phylogenetic relationship and spatial distribution of ‘Candidatus Phytoplasma ulmi’ strains in Germany

B. Schneider; B. Hüttel; C. Zübert; et al. Scientific Reports 2020. doi:10.1038/s41598-020-78745-w

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Twenty-nine groEL genotypes of Candidatus Phytoplasma ulmi were distinguished in elm.

Taxon: elme1
Interactor: Candidatus Phytoplasma ulmiCandidatus Phytoplasma ulmie1pathogen
Gene: groELe4
Outcome: genotypese4
Value: Twenty-ninee4

Verbatim

e1
“A recent survey in Germany revealed the wide presence of 'Candidatus Phytoplasma ulmi' in native elm stands”
✓ located verbatim in the source · abstract, characters 0–107

e4
“Twenty-nine groEL and 74 imp genotypes were distinguished based on polymorphic sites”
✓ located verbatim in the source · abstract, characters 413–497

Title

Genetic variation, phylogenetic relationship and spatial distribution of ‘Candidatus Phytoplasma ulmi’ strains in Germany

B. Schneider; B. Hüttel; C. Zübert; et al. Scientific Reports 2020. doi:10.1038/s41598-020-78745-w

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Seventy-four imp genotypes of Candidatus Phytoplasma ulmi were distinguished in elm.

Taxon: elme1
Interactor: Candidatus Phytoplasma ulmiCandidatus Phytoplasma ulmie1pathogen
Gene: impe4
Outcome: genotypese4
Value: 74e4

Verbatim

e1
“A recent survey in Germany revealed the wide presence of 'Candidatus Phytoplasma ulmi' in native elm stands”
✓ located verbatim in the source · abstract, characters 0–107

e4
“Twenty-nine groEL and 74 imp genotypes were distinguished based on polymorphic sites”
✓ located verbatim in the source · abstract, characters 413–497

Title

Genetic variation, phylogenetic relationship and spatial distribution of ‘Candidatus Phytoplasma ulmi’ strains in Germany

B. Schneider; B. Hüttel; C. Zübert; et al. Scientific Reports 2020. doi:10.1038/s41598-020-78745-w

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Phylogenetic analysis of the groEL gene clustered all Candidatus Phytoplasma ulmi strains apart from related 16SrV-group phytoplasmas.

Taxon: elme1
Interactor: Candidatus Phytoplasma ulmiCandidatus Phytoplasma ulmie1pathogen
Gene: groELe5
Outcome: Phylogenetic analysise5
Direction: clusterede5
Comparator: related phytoplasmas of the 16SrV groupe5

Verbatim

e1
“A recent survey in Germany revealed the wide presence of 'Candidatus Phytoplasma ulmi' in native elm stands”
✓ located verbatim in the source · abstract, characters 0–107

e5
“Phylogenetic analysis of the groEL gene clustered all 'Ca. P. ulmi' strains and separated them from related phytoplasmas of the 16SrV group”
✓ located verbatim in the source · abstract, characters 499–638

Title

Genetic variation, phylogenetic relationship and spatial distribution of ‘Candidatus Phytoplasma ulmi’ strains in Germany

B. Schneider; B. Hüttel; C. Zübert; et al. Scientific Reports 2020. doi:10.1038/s41598-020-78745-w

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

The regional distribution pattern of Candidatus Phytoplasma ulmi genotypes in elm was congruent for some groEL and imp genotypes.

Taxon: elme1
Interactor: Candidatus Phytoplasma ulmiCandidatus Phytoplasma ulmie1pathogen
Outcome: regional distribution patterne0
Direction: congruente0
Qualifier: a strict linkage for all genotypes was not apparente0

Verbatim

e0
“The regional distribution pattern was congruent for some of the groEL and imp genotypes, but a strict linkage for all genotypes was not apparent”
✓ located verbatim in the source · abstract, characters 1156–1300

e1
“A recent survey in Germany revealed the wide presence of 'Candidatus Phytoplasma ulmi' in native elm stands”
✓ located verbatim in the source · abstract, characters 0–107

Title

Genetic variation, phylogenetic relationship and spatial distribution of ‘Candidatus Phytoplasma ulmi’ strains in Germany

B. Schneider; B. Hüttel; C. Zübert; et al. Scientific Reports 2020. doi:10.1038/s41598-020-78745-w

Other claims from this paper (7)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Candidatus Phytoplasma ulmi was detected in one elm tree.

Taxon: UlmusUlmust0
Interactor: ‘Candidatus Phytoplasma ulmi’Candidatus Phytoplasma ulmie0pathogen
Outcome: was detectede0
Value: one treee0

Verbatim

e0
“In one tree ‘Candidatus Phytoplasma ulmi’, EU quarantine regulated pathogen, was detected”
✓ located verbatim in the source · abstract, characters 184–273

t0
“Ulmus”
✓ located verbatim in the source · title, characters 22–27

Title

Phytoplasma survey in Ulmus species in Belgium

Stéphan Steyer; Frédéric Fauche; Anne-Marie Deeren; et al. Phytopathogenic Mollicutes 2019. doi:10.5958/2249-4677.2019.00111.7

Other claims from this paper (2)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Jordanian samples had 98–100% sequence identity with Candidatus Phytoplasma ulmi related strains.

Taxon: date palmPhoenix dactyliferat0
Interactor: ‘Candidatus Phytoplasma ulmi’Candidatus Phytoplasma ulmie0pathogen
Outcome: sequence identitye0
Value: 98–100%e0
Setting: Jordane1

Verbatim

e0
“98–100% sequence identity with ‘Candidatus Phytoplasma ulmi’-related strains”
✓ located verbatim in the source · abstract, characters 791–867

t0
“date palm”
✓ located verbatim in the source · title, characters 46–55

e1
“samples from Jordan revealed”
✓ located verbatim in the source · abstract, characters 661–689

Title

Molecular detection of phytoplasmas infecting date palm in Saudi Arabia and Jordan

Khalid Alhudaib; Abeer Abu Shirbi; Ibtihal Abu Obaid; et al. Phytopathogenic Mollicutes 2019. doi:10.5958/2249-4677.2019.00005.7

Other claims from this paper (3)

Candidatus Phytoplasma ulmi 67 claims

67 claims