By interacting organism › Bacteria › Lysobacteraceae › Stenotrophomonas

Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

Flavobacterium and Stenotrophomonas may play important roles in the nitrogen cycle in the rhizosphere.

Taxon: cigar tobaccoe0
Interactor: FlavobacteriumFlavobacteriume1other
Second interactor: StenotrophomonasStenotrophomonase1other
Outcome: important roles in the nitrogen cycle in the rhizospheree1

Verbatim

e0
“cigar tobacco”
✓ located verbatim in the source · abstract, characters 480–493

e1
“Flavobacterium and Stenotrophomonas may play important roles in the nitrogen cycle in the rhizosphere”
✓ located verbatim in the source · abstract, characters 1314–1415

Title

Shading affects the nitrogen cycling process and plant nitrogen uptake by altering the rhizosphere microbial community

Guoyi Yuan; Xuanquan Zhu; Liuchen Zhang; et al. Frontiers in Plant Science 2026. doi:10.3389/fpls.2026.1780344

Other claims from this paper (10)

Intervention effect Shading significantly increased rhizosphere soil organic carbon and hydrolyzable nitrogen in cigar tobacco.
Intervention effect Shading significantly increased rhizosphere soil ammonium nitrogen and nitrate nitrogen in cigar tobacco.
Intervention effect Shading significantly increased nitrogen contents in tobacco plants.
Intervention effect Shading significantly affected the arginine biosynthesis pathway in the rhizosphere soil.
Intervention effect Under shading, the levels of L-oxornithine, citrulline and L-arginine in rhizosphere soil significantly increased.
Intervention effect Shading significantly altered the rhizosphere microbial community structure and the nitrogen cycling process.
Intervention effect Under shading, the abundance of organic nitrogen-decomposition genes (gdhA, ansB) significantly increased.
Intervention effect Under shading, the abundance of nitrification genes (amoA_B, amoB_B, amoC_B, hao) significantly increased.
Association Flavobacterium and Stenotrophomonas were significantly positively correlated with L-glutamic acid, L-ornithine and L-arginine (p < 0.05).
Mechanism Shading affects nitrogen absorption in crops via changes in the rhizosphere microbial community and the nitrogen cycling process.

Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Flavobacterium and Stenotrophomonas were significantly positively correlated with L-glutamic acid, L-ornithine and L-arginine (p < 0.05).

Taxon: cigar tobaccoe0
Interactor: FlavobacteriumFlavobacteriume1other
Second interactor: StenotrophomonasStenotrophomonase1other
Compound: L-glutamic acid, L-ornithine and L-argininee1
Outcome: correlatede1
Direction: positivelye1

Verbatim

e0
“cigar tobacco”
✓ located verbatim in the source · abstract, characters 480–493

e1
“Flavobacterium and Stenotrophomonas were significantly positively correlated with L-glutamic acid, L-ornithine and L-arginine ( p < 0.05)”
✓ located verbatim in the source · abstract, characters 1453–1590

Title

Shading affects the nitrogen cycling process and plant nitrogen uptake by altering the rhizosphere microbial community

Guoyi Yuan; Xuanquan Zhu; Liuchen Zhang; et al. Frontiers in Plant Science 2026. doi:10.3389/fpls.2026.1780344

Other claims from this paper (10)

Intervention effect Shading significantly increased rhizosphere soil organic carbon and hydrolyzable nitrogen in cigar tobacco.
Intervention effect Shading significantly increased rhizosphere soil ammonium nitrogen and nitrate nitrogen in cigar tobacco.
Intervention effect Shading significantly increased nitrogen contents in tobacco plants.
Intervention effect Shading significantly affected the arginine biosynthesis pathway in the rhizosphere soil.
Intervention effect Under shading, the levels of L-oxornithine, citrulline and L-arginine in rhizosphere soil significantly increased.
Intervention effect Shading significantly altered the rhizosphere microbial community structure and the nitrogen cycling process.
Intervention effect Under shading, the abundance of organic nitrogen-decomposition genes (gdhA, ansB) significantly increased.
Intervention effect Under shading, the abundance of nitrification genes (amoA_B, amoB_B, amoC_B, hao) significantly increased.
Mechanism Flavobacterium and Stenotrophomonas may play important roles in the nitrogen cycle in the rhizosphere.
Mechanism Shading affects nitrogen absorption in crops via changes in the rhizosphere microbial community and the nitrogen cycling process.

Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Stenotrophomonas and Pseudomonas were enriched in symptomatic rhizospheres.

Taxon: tobaccoNicotiana tabacumt0
Treatment: symptomatic rhizospherese4
Interactor: Stenotrophomonas and PseudomonasPseudomonasStenotrophomonase4other
Outcome: enrichmente4
Direction: increaseinferrede4

Verbatim

t0
“tobacco bacterial wilt”
✓ located verbatim in the source · title, characters 79–101

e4
“Taxonomic profiling revealed consistent enrichment of the pathogen R. solanacearum and opportunistic bacteria (including Stenotrophomonas and Pseudomonas ) in symptomatic rhizospheres”
✓ located verbatim in the source · abstract, characters 1172–1355

Title

Metagenomic insights into the rhizosphere microbiome dysbiosis associated with tobacco bacterial wilt

Ligang Xiang; Xiaoyan Wang; Mingxia Wen; et al. Frontiers in Microbiology 2026. doi:10.3389/fmicb.2026.1809980

Other claims from this paper (12)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Seed microbiota resuscitation identified 60 cold specialist amplicon sequence variants.

Taxon: Vicia sativaVicia sativae0
Interactor: StenotrophomonasStenotrophomonase1symbiont
Outcome: cold specialistse1
Value: 60e1

Verbatim

e0
“Using axenic Vicia sativa seeds”
✓ located verbatim in the source · abstract, characters 538–569

e1
“60 cold specialists (e.g. Stenotrophomonas and Geobacter)”
✓ located verbatim in the source · abstract, characters 1185–1242

Title

Differential ‘resuscitation’ from the seed microbiota: a plant‐holobiont ecological strategy for buffering stresses

Ying Xu; Ning Ling; Cendrine Mony; et al. New Phytologist 2026. doi:10.1111/nph.70920

Other claims from this paper (6)

Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

The chr10:7799021 variant near MYB113 is associated with Stenotrophomonas

Taxon: Solanum melongenaSolanum melongenae0
Interactor: StenotrophomonasStenotrophomonase4other
Gene: MYB113e4
Outcome: Stenotrophomonase4
Value: 2.16 × 10–15e4

Not reportedDirection

Verbatim

e0
“from 432 globally sourced eggplant accessions (Solanum melongena L.)”
✓ located verbatim in the source · abstract, characters 251–319

e4
“chr10:7799021 near MYB113 (associated with Stenotrophomonas, P = 2.16 × 10–15)”
✓ located verbatim in the source · abstract, characters 735–813

Title

Genetic Dissection of the Eggplant Rhizosphere Microbiome Enables Microbiome-Assisted Breeding

Yarong Li; Weiliu Li; Guiyun Gan; et al. Horticulture Research 2026. doi:10.1093/hr/uhag163

Other claims from this paper (9)

Observationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Healthy orchard communities were enriched in Stenotrophomonas.

Taxon: mulberryt0
Interactor: StenotrophomonasStenotrophomonase0symbiont
Outcome: enriched in putative beneficial taxae0
Direction: enrichede0

Verbatim

e0
“This community was significantly enriched in putative beneficial taxa, including the bacteria Stenotrophomonas and Pseudomonas, the fungus Mortierella, and the predatory protist Colpoda.”
✓ located verbatim in the source · abstract, characters 897–1083

t0
“mulberry”
✓ located verbatim in the source · title, characters 40–48

Title

Suppressive microbiome protects against mulberry wilt by safeguarding host glycosylphosphatidylinositol-anchor biosynthesis

Yiman Zhang; Qiumei Liu; Lei Jing; et al. Journal of Applied Microbiology 2026. doi:10.1093/jambio/lxag060

Other claims from this paper (13)

Observationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Stenotrophomonas was enriched in the intercropping rhizosphere at Site A.

Taxon: Sugarcanet0
Interactor: StenotrophomonasStenotrophomonase0symbiont
Outcome: Stenotrophomonase0
Direction: enrichede0
Setting: Site Ae0

Verbatim

e0
“Stenotrophomonas, enriched significantly in the intercropping rhizosphere soil at Site A”
✓ located verbatim in the source · abstract, characters 1561–1649

t0
“Sugarcane”
✓ located verbatim in the source · title, characters 0–9

Title

Sugarcane-peanut intercropping promotes crop health by recruiting beneficial bacteria, enhancing soil and crop productivity

Nyumah Fallah; Yongmei Zhou; Jiapan Lian; et al. Farming System 2026. doi:10.1016/j.farsys.2026.100220

Other claims from this paper (11)

Intervention effect Intercropping raised land equivalent ratio to 1.42 at Site A.
Intervention effect Intercropping raised land equivalent ratio to 1.21 at Site B.
Intervention effect Stem diameter increased 8.43% in intercropping plots at Site A versus monoculture.
Intervention effect Stem diameter increased 9.51% in intercropping plots at Site B versus monoculture.
Observation Single-stem weight under intercropping was higher at Site B than Site A.
Intervention effect Effective stems per hectare fell by 14.99% in Site B intercropping plots.
Intervention effect Effective stems per hectare fell by 30.36% in Site B intercropping plots.
Intervention effect Intercropping raised alkali-hydrolyzable nitrogen, available phosphorus, and exchangeable potassium in rhizosphere and bulk soils at maturity.
Observation Burkholderia-Caballeronia-Paraburkholderia, Azospirillum, and Rhizobiaceae were enriched in intercropping bulk soil at elongation.
Observation Burkholderia-Caballeronia-Paraburkholderia, Mesorhizobium, Bradyrhizobium, and Bacillus were enriched at maturity.
Association Beneficial bacterial recruitment was associated with red stripe disease suppression at both sites.

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Severely affected tomato plants recruited Stenotrophomonas to roots and rhizosphere.

Taxon: TomatoSolanum lycopersicume0
Organ / stage: rhizosphere and rootse0
Interactor: StenotrophomonasStenotrophomonase0symbiont
Outcome: recruitede0

Verbatim

e0
“Tomato plants with severe leaf mold disease recruited certain beneficial bacterial taxa, such as Enterobacter, Streptomyces, Sphingomonas , and Stenotrophomonas, to the rhizosphere and roots”
✓ located verbatim in the source · abstract, characters 586–776

Title

Pathogen-induced assemblage of beneficial rhizosphere consortia enhances tomato resistance against Cladosporium fulvum Cooke

Xuenan Mu; Zhigang Wang; Weihui Xu; et al. Scientia Horticulturae 2026. doi:10.1016/j.scienta.2026.114904

Other claims from this paper (13)

Association Root and rhizosphere community composition differed significantly between mild and severe leaf mold disease.
Observation Severely affected tomato plants recruited Enterobacter to roots and rhizosphere.
Observation Severely affected tomato plants recruited Streptomyces to roots and rhizosphere.
Observation Severely affected tomato plants recruited Sphingomonas to roots and rhizosphere.
Intervention effect The 11-strain SC-I controlled tomato leaf mold.
Intervention effect Seven-strain SC-II maintained the disease-control efficacy of SC-I.
Intervention effect SC-II raised lipoxygenase activity to 1.02-fold control.
Intervention effect SC-II raised peroxidase activity to 1.25-fold control.
Intervention effect SC-II raised polyphenol oxidase activity to 1.60-fold control.
Intervention effect SC-II raised phenylalanine ammonia-lyase activity to 1.28-fold control.
Intervention effect SC-II promoted salicylic acid accumulation to a peak of 896.67 pmol/L.
Intervention effect SC-II promoted jasmonic acid accumulation to a peak of 2614.13 pmol/L.
Mechanism SC-II induced resistance against C. fulvum infection.

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Spoilage-associated microorganisms including Pseudomonas, Stenotrophomonas and Pantoea decreased.

Taxon: lettuceLactuca sativat0
Interactor: PseudomonasPseudomonase0other
Second interactor: StenotrophomonasStenotrophomonase0other
Outcome: spoilage-associated microorganismse0
Direction: decreasede0
Qualifier: Pantoeae0

Not reportedTreatmentComparator

Verbatim

t0
“lettuce”
✓ located verbatim in the source · title, characters 68–75

e0
“decreased spoilage-associated microorganisms including Pseudomonas , Stenotrophomonas , and Pantoea”
✓ located verbatim in the source · abstract, characters 924–1023

Title

Single-pulse silicic acid immersion for extending the shelf life of lettuce

Zhihao Pang; Li-Xue Qiu; Yuxiao Wang; et al. LWT 2025. doi:10.1016/j.lwt.2025.118407

Other claims from this paper (15)

Intervention effect Lettuce immersed once in 10 mM silicic acid for 1 minute and stored at 25 °C for 5 days lost only 5% weight versus 16% in controls.
Recommendation Of the silicic acid concentrations tested (0 to 20 mM), 10 mM was determined optimal considering efficacy and cost-effectiveness.
Observation SEM-EDS analysis confirmed silicon deposition on leaf surfaces.
Intervention effect Silicon application increased lettuce chlorophyll content by 38%.
Intervention effect Silicon application increased lettuce vitamin C by 13%.
Intervention effect Silicon application reduced nitrite levels in lettuce by 91%, below safety standards.
Intervention effect Antioxidant enzyme activities (SOD, CAT, POD) increased by 74%-383%.
Intervention effect Microbial analysis revealed an 83% reduction in bacterial load.
Observation Microbial analysis revealed altered β-diversity.
Intervention effect Washing removed 31% of the deposited silicon.
Observation Silicon intake from washed lettuce was far below established thresholds.
Observation Cherry tomatoes treated with single-pulse silicic acid showed negligible decay after 5 days.
Observation Kyoho grapes treated with single-pulse silicic acid showed negligible decay after 5 days.
Intervention effect Hardness of cherry tomatoes increased by 38% after treatment.
Intervention effect Hardness of Kyoho grapes increased by 30% after treatment.

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The PHY_PM treatment reduced the abundance of Chryseobacterium, Pedobacter, Phyllobacterium, Sphingobacterium and Stenotrophomonas in seedling-phase roots, and this effect did not persist.

Taxon: MaizeZea mayse0
Organ / stage: roots in the seedling phasee3
Treatment: PHY_PMe3
Interactor: Chryseobacterium, Pedobacter, Phyllobacterium, Sphingobacterium, and StenotrophomonasPhyllobacteriumSphingobacteriumStenotrophomonasChryseobacteriumPedobactere3symbiont
Outcome: abundance of taxa like Chryseobacterium, Pedobacter, Phyllobacterium, Sphingobacterium, and Stenotrophomonase3
Direction: reducede3
Qualifier: this effect did not persiste3
Comparator: controle1
Setting: Field trialse1

Verbatim

e0
“Maize (Zea mays L.) relies heavily on nitrogen and phosphorus inputs, typically supplied through organic and inorganic fertilizers”
✓ located verbatim in the source · abstract, characters 0–130

e1
“Field trials included four treatments: a control, PHY-coated seeds, PM, and combined PHY_PM”
✓ located verbatim in the source · abstract, characters 586–677

e3
“The PHY_PM-treated roots in the seedling phase showed a reduced abundance of taxa like Chryseobacterium, Pedobacter, Phyllobacterium, Sphingobacterium, and Stenotrophomonas, but this effect did not persist. In the PM-treated roots, Flavisolibacter was significantly enriched at harvesting”
✓ located verbatim in the source · abstract, characters 888–1176

Title

The Influence of Bacterial Inoculants and a Biofertilizer on Maize Cultivation and the Associated Shift in Bacteriobiota During the Growing Season

Katarina Kruščić; Aleksandra Jelušić; Matjaž Hladnik; et al. Plants 2025. doi:10.3390/plants14121753

Other claims from this paper (8)

Intervention effect Early in development, poultry manure increased the rhizosphere abundance of beneficial genera Sphingomonas, Microvirga and Streptomyces relative to the control.
Intervention effect The poultry manure effect on beneficial rhizosphere genera declined in later growth stages.
Intervention effect Poultry manure significantly enriched Flavisolibacter in maize roots at harvesting.
Intervention effect Beneficial bacteria improved microbial evenness in the maize rhizosphere.
Intervention effect The PHY_PM treatment promoted bacterial diversity in the maize rhizosphere.
Intervention effect The PHY_PM treatment promoted maize growth.
Association Integration of poultry manure and PGPR correlates with maize plant parameters.
Observation Genome analysis of the PHY strains revealed plant-beneficial traits: nutrient mobilization, stress resilience and biocontrol potential.

Stenotrophomonas 100 claims

100 claims