Intervention effectmodel-written summary

Silencing StWRKY1 significantly increased pathogen biomass in potato.

A claim from Transcription factorStWRKY1regulates phenylpropanoid metabolites conferring late blight resistance in potato · 2015

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Silencing StWRKY1 significantly increased pathogen biomass in potato.

Treatment
Silencing of the StWRKY1 genee0
Interactor
Phytophthora infestansPhytophthora infestanst0pathogen
Gene
StWRKY1e0
Outcome
pathogen biomasse0
Direction
increasinge0

Not reportedMaterialCompoundOrgan / stageSecond interactorSecond interactor roleComparatorSettingValueQualifier

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Silencing of the StWRKY1 gene was associated with signs of reduced late blight resistance by significantly increasing the pathogen biomass and decreasing the abundance of HCAAs”

✓ located verbatim in the source · abstract, characters 1443–1619
t0

“potato-Phytophthora infestans”

✓ located verbatim in the source · abstract, characters 389–418

Title

Transcription factorStWRKY1regulates phenylpropanoid metabolites conferring late blight resistance in potato

Kalenahalli N. Yogendra; Arun Kumar; Kobir Sarkar; et al. Journal of Experimental Botany 2015. doi:10.1093/jxb/erv434

Other claims from this paper (5)

Record rev-4eeeef99871483bfbe33423d77184646c5ec511273fc338e4395210e2d6717ee · schema claims-v0.9 · position 4 in the model’s answer

loss of function · Phytophthora infestans · Solanum tuberosum (potato)Positive and negative results

31 papers: 16 positive, 15 negative or no effect

14 papers in the same direction as this claim · 16 in the opposite direction

  1. negative
    Silencing StWRKY26 compromised intrinsic resistance in the resistant cultivar.

    Transcriptomic analysis reveals distinct strategies of two potato cultivars against Phytophthora infestans and identifies StWRKY26 as a positive regulator of late blight resistance · 2025

    Same directionCites this paper

  2. positive
    Silencing Avr3a compromises the pathogenicity of P. infestans.

    Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1 · 2010

    Opposite direction

  3. positive
    Silencing Pi03192 in P. infestans reduces its pathogenicity.

    An RxLR Effector from Phytophthora infestans Prevents Re-localisation of Two Plant NAC Transcription Factors from the Endoplasmic Reticulum to the Nucleus · 2013

    Opposite direction

  4. positive
    Silencing the monooxygenase gene inhibited P. infestans infection.

    Secreted pectin monooxygenases drive plant infection by pathogenic oomycetes · 2021

    Opposite direction

  5. positive
    RNA interference silencing of the CesA gene family caused a similar disruption of the cell wall surrounding appressoria.

    Cellulose Synthesis inPhytophthora infestansIs Required for Normal Appressorium Formation and Successful Infection of Potato · 2008

    Opposite direction

  6. positive
    Silencing of five S-genes in potato cultivar Desiree resulted in complete resistance to the P. infestans isolate Pic99189.

    Silencing of six susceptibility genes results in potato late blight resistance · 2016

    Opposite direction

  7. positive
    Transient Pihmp1 silencing caused loss of pathogenicity.

    A novelPhytophthora infestanshaustorium-specific membrane protein is required for infection of potato · 2008

    Opposite direction

  8. positive
    Silencing StERF3 enhanced foliage resistance to P. infestans.

    The Potato ERF Transcription Factor StERF3 Negatively Regulates Resistance to Phytophthora infestans and Salt Tolerance in Potato · 2015

    Opposite direction

22 papers more in this group

See all 31 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.

Functional evidence on LOC102583094

Claims that state a gain or loss of function of this gene and what it did to a trait, compared with wild type or a control.

LOC102583094 · NCBI Gene 102583094 ↗ · Open in the knowledge graph

Solanum tuberosum (potato)1 paper · 1 traitTested in one paper only

Only one paper in the store tests this gene's function in Solanum tuberosum (potato).

Disease resistance1 paper

  1. Promotes
    Silencing StWRKY1 significantly increased pathogen biomass in potato.

    Transcription factorStWRKY1regulates phenylpropanoid metabolites conferring late blight resistance in potato · 2015

    loss of function → less of the traitThis claim

The program reads each claim's manipulation and the direction of the trait, and from them the gene's role (gain and more, or loss and less, means it promotes the trait). Roles are read by program from each claim's wording. Pairs of papers on the same host, gene and trait were checked claim by claim by two model readers; a pair is marked checked only when both accept it. Gene layer v0.8, 21 trait classes.