Barley yellow dwarf virus 30 claims

species · family Tombusviridae · virus · NCBI Taxonomy ↗

Also written in claims: BYDV

2 spellings

Barley yellow dwarf virus
Barley yellow dwarf virusPublic domain · Wikimedia Commons ↗
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The established multiplex PCR system simultaneously detects BYDV GPV, GAV and PAV populations in Yangling.

Outcome
detect BYDV popula-tion -GPV,GAV and PAV simultaneouslye0
Setting
Yanglinge0

Not reportedComparator

Verbatim

e0

“A multiplex PCR system was established to detect BYDV population in Yangling,which can detect BYDV popula-tion -GPV,GAV and PAV simultaneously.”

✓ located verbatim in the source · abstract, characters 281–424

Title

Investigation of Wheat Varieties on Resistance to BYDV and Detection of BYDV Population by Multiplex PCR

Yu XiangQuan Mailei zuowu xuebao 2010

Other claims from this paper (19)
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Multiplex PCR verified eight infected Yangling samples, showing heavy mixed infection and 25% PAV infection; the system was judged stable and reliable.

Outcome
successfully verified with multiplex PCR systeme0
Value
Eighte0
Qualifier
the phenomenon of mixed infection was heavy,the infection rate of PAV is 25%,and the measured results indicated that the system was stable and reliablee0
Setting
Yanglinge0

Verbatim

e0

“Eight samples from Yangling infected by BYDV were successfully verified with multiplex PCR system,the phenomenon of mixed infection was heavy,the infection rate of PAV is 25%,and the measured results indicated that the system was stable and reliable.”

✓ located verbatim in the source · abstract, characters 1345–1595

Title

Investigation of Wheat Varieties on Resistance to BYDV and Detection of BYDV Population by Multiplex PCR

Yu XiangQuan Mailei zuowu xuebao 2010

Other claims from this paper (19)
Observationobservedoriginal resultmeasured

Claim · model-written summary

The 105-nt cap-independent translation element (TE105) of Barley yellow dwarf virus RNA forms a cruciform secondary structure with four helices connected by single-stranded regions.

Taxon
Barley yellow dwarf virusBarley yellow dwarf viruse0
Outcome
cruciform secondary structuree1

Verbatim

e0

“Barley yellow dwarf virus RNA lacks both a 5' cap and a poly(A) tail”

✓ located verbatim in the source · abstract, characters 0–68
e1

“the 105-nt TE (TE105) forms a cruciform secondary structure containing four helices connected by single-stranded regions”

✓ located verbatim in the source · abstract, characters 533–653

Title

Structure and function of a cap-independent translation element that functions in either the 3′ or the 5′ untranslated region

LIANG GUO; EDWARDS ALLEN; W. ALLEN MILLER RNA 2000. doi:10.1017/s1355838200001539

Other claims from this paper (6)
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Moroccan PAV-type isolates showed significant biological variability and formed two clusters.

Taxon
barley yellow dwarf virusBarley yellow dwarf viruse1
Outcome
biological variabilitye0
Qualifier
Cluster 1 contained isolates MA9501, MA9502, MA9504, MA9512 and MA9513, and cluster 2 the MA9415, MA9505, MA9508, MA9511, MA9514, MA9516 and MA9517.e2

Verbatim

e0

“Significant biological variability was observed among the Moroccan PAV–type isolates, with the isolates falling into two clusters.”

✓ located verbatim in the source · abstract, characters 361–491
e1

“12 barley yellow dwarf virus PAV‐type isolates”

✓ located verbatim in the source · abstract, characters 124–170
e2

“Cluster 1 contained isolates MA9501, MA9502, MA9504, MA9512 and MA9513, and cluster 2 the MA9415, MA9505, MA9508, MA9511, MA9514, MA9516 and MA9517.”

✓ located verbatim in the source · abstract, characters 492–640

Title

Severity of infection of Moroccan barley yellow dwarf virus PAV isolates correlates with variability in their coat protein sequences

B. BENCHARKI; J. MUTTERER; M El YAMANI; et al. Annals of Applied Biology 1999. doi:10.1111/j.1744-7348.1999.tb05239.x

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Sequence homology reproduced the two biological clusters.

Taxon
barley yellow dwarf virusBarley yellow dwarf viruse1
Outcome
same two clusters of the isolatese0

Verbatim

e0

“Sequence homology grouping yielded the same two clusters of the isolates as found by measuring biological variability.”

✓ located verbatim in the source · abstract, characters 1011–1129
e1

“12 barley yellow dwarf virus PAV‐type isolates”

✓ located verbatim in the source · abstract, characters 124–170

Title

Severity of infection of Moroccan barley yellow dwarf virus PAV isolates correlates with variability in their coat protein sequences

B. BENCHARKI; J. MUTTERER; M El YAMANI; et al. Annals of Applied Biology 1999. doi:10.1111/j.1744-7348.1999.tb05239.x

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Between-cluster coat-protein nucleotide identity was 87.4% to 90.5%.

Taxon
barley yellow dwarf virusBarley yellow dwarf viruse1
Gene
CPe0
Outcome
nucleotide identitye0
Value
87.4% to 90.5%e0

Not reportedDirection

Verbatim

e0

“Comparisons of the CP sequences between the two clusters revealed 87.4% to 90.5% nucleotide identity and 82.6% to 87.6% amino acid identity.”

✓ located verbatim in the source · abstract, characters 1130–1270
e1

“12 barley yellow dwarf virus PAV‐type isolates”

✓ located verbatim in the source · abstract, characters 124–170

Title

Severity of infection of Moroccan barley yellow dwarf virus PAV isolates correlates with variability in their coat protein sequences

B. BENCHARKI; J. MUTTERER; M El YAMANI; et al. Annals of Applied Biology 1999. doi:10.1111/j.1744-7348.1999.tb05239.x

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Between-cluster coat-protein amino-acid identity was 82.6% to 87.6%.

Taxon
barley yellow dwarf virusBarley yellow dwarf viruse1
Gene
CPe0
Outcome
amino acid identitye0
Value
82.6% to 87.6%e0

Not reportedDirection

Verbatim

e0

“Comparisons of the CP sequences between the two clusters revealed 87.4% to 90.5% nucleotide identity and 82.6% to 87.6% amino acid identity.”

✓ located verbatim in the source · abstract, characters 1130–1270
e1

“12 barley yellow dwarf virus PAV‐type isolates”

✓ located verbatim in the source · abstract, characters 124–170

Title

Severity of infection of Moroccan barley yellow dwarf virus PAV isolates correlates with variability in their coat protein sequences

B. BENCHARKI; J. MUTTERER; M El YAMANI; et al. Annals of Applied Biology 1999. doi:10.1111/j.1744-7348.1999.tb05239.x

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Cluster 1 coat proteins were closely related to Australian, North American and Japanese PAV-type isolates.

Taxon
barley yellow dwarf virusBarley yellow dwarf viruse1
Gene
CPe0
Outcome
closely relatede0
Qualifier
Australian (Vic‐PAV), the North American (NY–PAV, P–PAV), and Japanese (JPN–PAV) PAV–type isolatese0

Verbatim

e0

“the CP's of cluster 1 were closely related to the Australian (Vic‐PAV), the North American (NY–PAV, P–PAV), and Japanese (JPN–PAV) PAV–type isolates”

✓ located verbatim in the source · abstract, characters 1330–1478
e1

“12 barley yellow dwarf virus PAV‐type isolates”

✓ located verbatim in the source · abstract, characters 124–170

Title

Severity of infection of Moroccan barley yellow dwarf virus PAV isolates correlates with variability in their coat protein sequences

B. BENCHARKI; J. MUTTERER; M El YAMANI; et al. Annals of Applied Biology 1999. doi:10.1111/j.1744-7348.1999.tb05239.x

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Cluster 2 coat proteins were closely related to North American PAV-129.

Taxon
barley yellow dwarf virusBarley yellow dwarf viruse1
Gene
CPe0
Outcome
closely relatede0
Comparator
North American PAV–129 isolatee0

Verbatim

e0

“The CP's of cluster 2, on the other hand, were closely related to the North American PAV–129 isolate.”

✓ located verbatim in the source · abstract, characters 1480–1581
e1

“12 barley yellow dwarf virus PAV‐type isolates”

✓ located verbatim in the source · abstract, characters 124–170

Title

Severity of infection of Moroccan barley yellow dwarf virus PAV isolates correlates with variability in their coat protein sequences

B. BENCHARKI; J. MUTTERER; M El YAMANI; et al. Annals of Applied Biology 1999. doi:10.1111/j.1744-7348.1999.tb05239.x

Other claims from this paper (7)
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

An RFLP test on coat-protein PCR products distinguishes the two PAV-type clusters.

Taxon
barley yellow dwarf virusBarley yellow dwarf viruse1
Gene
CP genee0
Outcome
distinguishes between the two clusterse0

Not reportedComparator

Verbatim

e0

“an RFLP test on CP gene–derived PCR products has been developed which distinguishes between the two clusters of the PAV–type isolates”

✓ located verbatim in the source · abstract, characters 1591–1724
e1

“12 barley yellow dwarf virus PAV‐type isolates”

✓ located verbatim in the source · abstract, characters 124–170

Title

Severity of infection of Moroccan barley yellow dwarf virus PAV isolates correlates with variability in their coat protein sequences

B. BENCHARKI; J. MUTTERER; M El YAMANI; et al. Annals of Applied Biology 1999. doi:10.1111/j.1744-7348.1999.tb05239.x

Other claims from this paper (7)