Paper · 1992 · e-publications - Marquette (Marquette University)

Rhizobium purine metabolism and its role in infection of legumes

Jeffrey D. Newman

15
claims
27
verbatim quotes
2
citations
4
research areas
—
Not open access

Abstract

Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean. Mutations that cause this symbiotic defect mapped to seven partially-sequenced purine biosynthetic genes, all responsible for steps before the production of the intermediate 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR). Supplementing the root medium with AICA riboside, the unphosphorylated form of AICAR, substantially enhanced nodule development. Of the purines tested, only inosine enhanced nodulation, but very high concentrations were required for this effect. Studies with a double mutant indicated that the histidine pathway was required for inosine's effect, presumably because AICAR is produced as a byproduct of histidine synthesis. AICA riboside also promoted infection of soybean by two R. fredii purine auxotrophs, even though these mutants grew poorly with AICA riboside as a purine source. Nodules elicited by purine auxotrophs in the presence of AICA riboside had infection threads and anatomical features characteristic of normal nodules. The nodule-specific proteins, leghemoglobin and uricase, were detected in these nodules, although at lower levels than in nodules elicited by the wild type. Analysis of the temporal requirement for AICA riboside indicated that it was required during the entire infection process, rather than just for infection thread initiation. These studies also suggested that a critical stage of infection is reached six days post-inoculation, at which development becomes committed to forming a true root nodule structure. To better understand how AICA riboside enhances nodule development, AICA riboside utilization and uptake were examined and compared in three Rhizobium genetic backgrounds. A mutant resistant to the toxic AICA riboside analog, pyrazofurin, could not convert AICA riboside to AICAR. Nodulation assays with a purine auxotrophic derivative of this mutant demonstrated that this conversion was required for AICA riboside to promote infection. These results support the hypothesis that rhizobia divert AICAR from purine biosynthesis for the production of a factor that induces infection thread development in the plant. Successful infection by rhizobia triggers the nodule-specific developmental pathway, which leads to the formation of a true nodule structure that is distinct from the root-like structure that develops in the absence of infection.

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Claims 15

Observationobservedoriginal resultmeasured

Claim · model-written summary

Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean.

Taxon
beane1
Material
Purine auxotrophse1
Interactor
Rhizobium leguminosarum CFN42Rhizobium leguminosarume1symbiont
Outcome
uninfected pseudonodulese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Rhizobium leguminosarum
Rhizobium leguminosarum · Interactor · picture from its Wikimedia Commons categoryQaswarah 21 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Symbiotic-defect mutations mapped to seven partially-sequenced purine biosynthetic genes, all acting before AICAR production.

Taxon
beane1
Gene
purine biosynthetic genese2
Outcome
mapped to seven partially-sequenced purine biosynthetic genese2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“Mutations that cause this symbiotic defect mapped to seven partially-sequenced purine biosynthetic genes”

✓ located verbatim in the source · abstract, characters 92–196 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Supplementing the root medium with AICA riboside substantially enhanced nodule development on bean.

Taxon
beane1
Treatment
Supplementing the root medium with AICA ribosidee2
Outcome
nodule developmente2
Direction
enhancede2
Qualifier
substantiallye2

Not reportedComparator

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“Supplementing the root medium with AICA riboside, the unphosphorylated form of AICAR, substantially enhanced nodule development”

✓ located verbatim in the source · abstract, characters 321–448 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Of the purines tested, only inosine enhanced nodulation, and very high concentrations were required.

Taxon
beane1
Treatment
inosinee2
Outcome
nodulatione2
Direction
enhancede2
Qualifier
very high concentrations were requirede2
Comparator
the purines testede2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“Of the purines tested, only inosine enhanced nodulation, but very high concentrations were required for this effect”

✓ located verbatim in the source · abstract, characters 450–565 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The histidine pathway was required for the effect of inosine, presumably because AICAR is a byproduct of histidine synthesis.

Taxon
beane1
Material
double mutante2
Compound
AICARe2
Outcome
inosine's effecte2
Qualifier
the histidine pathway was requirede2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“Studies with a double mutant indicated that the histidine pathway was required for inosine's effect, presumably because AICAR is produced as a byproduct of histidine synthesis”

✓ located verbatim in the source · abstract, characters 567–742 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

AICA riboside promoted infection of soybean by two R. fredii purine auxotrophs.

Taxon
soybeanGlycine maxe1
Treatment
AICA ribosidee1
Interactor
R. fredii purine auxotrophsSinorhizobium frediie1symbiont
Outcome
infectione1
Direction
promotede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Sinorhizobium fredii
Sinorhizobium fredii · Interactor · picture from its Wikimedia Commons categoryNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“AICA riboside also promoted infection of soybean by two R. fredii purine auxotrophs, even though these mutants grew poorly with AICA riboside as a purine source”

✓ located verbatim in the source · abstract, characters 744–904 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The R. fredii purine auxotrophs grew poorly on AICA riboside as a purine source on soybean.

Taxon
soybeanGlycine maxe1
Interactor
R. fredii purine auxotrophsSinorhizobium frediie1symbiont
Outcome
grew poorlye1
Qualifier
with AICA riboside as a purine sourcee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Sinorhizobium fredii
Sinorhizobium fredii · Interactor · picture from its Wikimedia Commons categoryNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“AICA riboside also promoted infection of soybean by two R. fredii purine auxotrophs, even though these mutants grew poorly with AICA riboside as a purine source”

✓ located verbatim in the source · abstract, characters 744–904 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Nodules elicited by purine auxotrophs with AICA riboside had infection threads and anatomical features characteristic of normal nodules.

Taxon
beane1
Material
purine auxotrophse2
Organ / stage
Nodulese2
Treatment
AICA ribosidee2
Outcome
infection threads and anatomical featurese2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“Nodules elicited by purine auxotrophs in the presence of AICA riboside had infection threads and anatomical features characteristic of normal nodules”

✓ located verbatim in the source · abstract, characters 906–1055 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Leghemoglobin and uricase were detected in nodules at lower levels than in wild-type nodules.

Taxon
beane1
Organ / stage
nodulese2
Outcome
leghemoglobin and uricasee2
Direction
lower levelse2
Comparator
wild typee2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“The nodule-specific proteins, leghemoglobin and uricase, were detected in these nodules, although at lower levels than in nodules elicited by the wild type”

✓ located verbatim in the source · abstract, characters 1057–1212 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AICA riboside was required during the entire infection process, not just for infection thread initiation.

Taxon
beane1
Treatment
AICA ribosidee2
Outcome
required during the entire infection processe2
Qualifier
rather than just for infection thread initiatione2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“Analysis of the temporal requirement for AICA riboside indicated that it was required during the entire infection process, rather than just for infection thread initiation”

✓ located verbatim in the source · abstract, characters 1214–1385 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A critical stage of infection is reached six days post-inoculation, when development becomes committed to a true root nodule structure.

Taxon
beane1
Outcome
critical stage of infectione2
Value
six days post-inoculatione2
Qualifier
development becomes committed to forming a true root nodule structuree2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“a critical stage of infection is reached six days post-inoculation, at which development becomes committed to forming a true root nodule structure”

✓ located verbatim in the source · abstract, characters 1421–1567 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The AICA riboside-resistant mutant could not convert AICA riboside to AICAR.

Taxon
beane1
Material
A mutant resistant to the toxic AICA riboside analog, pyrazofurine2
Outcome
convert AICA riboside to AICARe2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“A mutant resistant to the toxic AICA riboside analog, pyrazofurin, could not convert AICA riboside to AICAR”

✓ located verbatim in the source · abstract, characters 1741–1848 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In nodulation assays, conversion of AICA riboside to AICAR was required for AICA riboside to promote infection.

Taxon
beane1
Material
purine auxotrophic derivative of this mutante2
Treatment
AICA ribosidee2
Outcome
promote infectione2
Qualifier
this conversion was requirede2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“Nodulation assays with a purine auxotrophic derivative of this mutant demonstrated that this conversion was required for AICA riboside to promote infection”

✓ located verbatim in the source · abstract, characters 1850–2005 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

Rhizobia divert AICAR from purine biosynthesis to produce a factor that induces infection thread development in the plant.

Taxon
beane1
Interactor
rhizobiae2symbiont
Compound
AICARe2
Outcome
infection thread developmente2
Qualifier
divert AICAR from purine biosynthesise2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“These results support the hypothesis that rhizobia divert AICAR from purine biosynthesis for the production of a factor that induces infection thread development in the plant”

✓ located verbatim in the source · abstract, characters 2007–2181 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Successful infection by rhizobia triggers the nodule-specific developmental pathway that forms a true nodule structure distinct from the root-like structure.

Taxon
beane1
Interactor
rhizobiae2symbiont
Outcome
formation of a true nodule structuree2
Qualifier
Successful infection by rhizobia triggers the nodule-specific developmental pathwaye2

Verbatim

e1

“Purine auxotrophs of Rhizobium leguminosarum CFN42 elicit uninfected pseudonodules on bean”

✓ located verbatim in the source · abstract, characters 0–90 · show in text ↑
e2

“Successful infection by rhizobia triggers the nodule-specific developmental pathway, which leads to the formation of a true nodule structure that is distinct from the root-like structure”

✓ located verbatim in the source · abstract, characters 2183–2369 · show in text ↑

in vitro · symbiosis · Phaseolus vulgaris (common bean)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

2 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive

1 paper more in this group

See all 5 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.