Abstract

Although hybrid proline-rich proteins (HyPRPs) are ubiquitous in plants, little is known about their roles other than as cell-wall structural proteins. We identified the gene HyPRP1 in Capsicum annuum and Nicotiana benthamiana, which encodes a protein containing proline-rich domain and eight-cysteine motif (8CM) that is constitutively expressed in various organs, mostly in the root, but is down-regulated upon inoculation with either incompatible or compatible pathogens. Ectopic expression of HyPRP1 in plants accelerated cell death, showing developmental abnormality with down-regulation of ROS-scavenging genes, and enhanced pathogen susceptibility suppressing expression of defense-related genes. Conversely, silencing of HyPRP1 suppressed pathogen-induced cell death, but enhanced disease resistance, with up-regulation of defense-related genes and inhibition of in planta growth of bacterial pathogens independently of signal molecule-mediated pathways. Furthermore, the secreted 8CM was sufficient for these HyPRP1 functions. Together, our results suggest that a common plant cell-wall structural protein, HyPRP1, performs distinct dual roles in positive regulation of cell death and negative regulation of basal defense against pathogen.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 13

Observationobservedoriginal resultmeasured

Claim · model-written summary

HyPRP1 encodes a protein with a proline-rich domain and eight-cysteine motif.

Taxon
Capsicum annuumCapsicum annuume0
Gene
HyPRP1e0
Outcome
protein containing proline-rich domain and eight-cysteine motif (8CM)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Capsicum annuum
Capsicum annuum · TaxonBilljones94 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We identified the gene HyPRP1 in Capsicum annuum and Nicotiana benthamiana, which encodes a protein containing proline-rich domain and eight-cysteine motif (8CM)”

✓ located verbatim in the source · abstract, characters 152–313 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

HyPRP1 is constitutively expressed across organs, predominantly in roots.

Taxon
Capsicum annuumCapsicum annuume1
Organ / stage
roote0
Gene
HyPRP1t0
Outcome
constitutively expressede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Capsicum annuum
Capsicum annuum · TaxonBilljones94 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“that is constitutively expressed in various organs, mostly in the root”

✓ located verbatim in the source · abstract, characters 314–384 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1”

✓ located verbatim in the source · title, characters 0–39 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

HyPRP1 expression declines after inoculation with compatible or incompatible pathogens.

Taxon
Capsicum annuumCapsicum annuume1
Treatment
inoculation with either incompatible or compatible pathogense0
Interactor
pathogense0pathogen
Gene
HyPRP1t0
Outcome
HyPRP1t0
Direction
down-regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Capsicum annuum
Capsicum annuum · TaxonBilljones94 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“is down-regulated upon inoculation with either incompatible or compatible pathogens.”

✓ located verbatim in the source · abstract, characters 390–474 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1”

✓ located verbatim in the source · title, characters 0–39 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic HyPRP1 expression accelerated cell death.

Taxon
plantsViridiplantaee0
Treatment
Ectopic expression of HyPRP1e0
Gene
HyPRP1e0
Outcome
cell deathe0
Direction
acceleratede0

Not reportedComparator

Verbatim

e0

“Ectopic expression of HyPRP1 in plants accelerated cell death”

✓ located verbatim in the source · abstract, characters 475–536 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic HyPRP1 expression caused developmental abnormality.

Taxon
plantsViridiplantaee0
Treatment
Ectopic expression of HyPRP1e0
Gene
HyPRP1e0
Outcome
developmental abnormalitye0

Not reportedComparatorDirection

Verbatim

e0

“Ectopic expression of HyPRP1 in plants accelerated cell death, showing developmental abnormality”

✓ located verbatim in the source · abstract, characters 475–571 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ectopic HyPRP1 expression lowered ROS-scavenging gene expression.

Taxon
plantsViridiplantaee2
Treatment
Ectopic expression of HyPRP1e2
Gene
ROS-scavenging genese0
Outcome
ROS-scavenging genese0
Direction
down-regulatione0

Not reportedComparator

Verbatim

e0

“showing developmental abnormality with down-regulation of ROS-scavenging genes”

✓ located verbatim in the source · abstract, characters 538–616 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens”

✓ located verbatim in the source · title, characters 0–152 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic HyPRP1 expression increased pathogen susceptibility.

Taxon
plantsViridiplantaee2
Treatment
Ectopic expression of HyPRP1e2
Interactor
pathogene0pathogen
Outcome
pathogen susceptibilitye0
Direction
enhancede0

Not reportedComparator

Verbatim

e0

“enhanced pathogen susceptibility suppressing expression of defense-related genes.”

✓ located verbatim in the source · abstract, characters 622–703 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens”

✓ located verbatim in the source · title, characters 0–152 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic HyPRP1 expression suppressed defense-related gene expression.

Taxon
plantsViridiplantaee2
Treatment
Ectopic expression of HyPRP1e2
Gene
defense-related genese0
Outcome
expression of defense-related genese0
Direction
suppressinge0

Not reportedComparator

Verbatim

e0

“enhanced pathogen susceptibility suppressing expression of defense-related genes.”

✓ located verbatim in the source · abstract, characters 622–703 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens”

✓ located verbatim in the source · title, characters 0–152 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

HyPRP1 silencing suppressed pathogen-induced cell death.

Taxon
plantsViridiplantaee2
Treatment
silencing of HyPRP1e0
Interactor
pathogene0pathogen
Gene
HyPRP1e0
Outcome
pathogen-induced cell deathe0
Direction
suppressede0

Not reportedComparator

Verbatim

e0

“silencing of HyPRP1 suppressed pathogen-induced cell death”

✓ located verbatim in the source · abstract, characters 716–774 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens”

✓ located verbatim in the source · title, characters 0–152 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

HyPRP1 silencing enhanced disease resistance.

Taxon
plantsViridiplantaee2
Treatment
silencing of HyPRP1e0
Interactor
pathogenst0pathogen
Gene
HyPRP1e0
Outcome
disease resistancee0
Direction
enhancede0

Not reportedComparator

Verbatim

e0

“silencing of HyPRP1 suppressed pathogen-induced cell death, but enhanced disease resistance”

✓ located verbatim in the source · abstract, characters 716–807 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens”

✓ located verbatim in the source · title, characters 0–152 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

HyPRP1 silencing upregulated defense-related genes.

Taxon
plantsViridiplantaee2
Treatment
silencing of HyPRP1e3
Gene
defense-related genese0
Outcome
defense-related genese0
Direction
up-regulatione0

Not reportedComparator

Verbatim

e0

“with up-regulation of defense-related genes”

✓ located verbatim in the source · abstract, characters 809–852 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens”

✓ located verbatim in the source · title, characters 0–152 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

HyPRP1 silencing inhibited bacterial pathogen growth in plants.

Taxon
plantsViridiplantaee2
Treatment
silencing of HyPRP1e3
Interactor
bacterial pathogense0pathogen
Outcome
in planta growth of bacterial pathogense0
Direction
inhibitione0
Qualifier
independently of signal molecule-mediated pathwayse0

Not reportedComparator

Verbatim

e0

“inhibition of in planta growth of bacterial pathogens independently of signal molecule-mediated pathways.”

✓ located verbatim in the source · abstract, characters 857–962 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens”

✓ located verbatim in the source · title, characters 0–152 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The secreted 8CM motif sufficed for the reported HyPRP1 functions.

Taxon
plantsViridiplantaee2
Gene
8CMe0
Outcome
HyPRP1 functionse0
Qualifier
secretede0

Verbatim

e0

“the secreted 8CM was sufficient for these HyPRP1 functions.”

✓ located verbatim in the source · abstract, characters 976–1035 · show in text ↑
t0

“A common plant cell‐wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens”

✓ located verbatim in the source · title, characters 0–152 · show in text ↑
e1

“Capsicum annuum”

✓ located verbatim in the source · abstract, characters 185–200 · show in text ↑
e2

“Ectopic expression of HyPRP1 in plants”

✓ located verbatim in the source · abstract, characters 475–513 · show in text ↑
e3

“silencing of HyPRP1”

✓ located verbatim in the source · abstract, characters 716–735 · show in text ↑

overexpression · disease · Viridiplantae (plants)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

overexpression · molecular: expression · Viridiplantae (plants)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

overexpression · cytology · Viridiplantae (plants)Positive and negative results

3 papers: 1 positive, 2 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
See all 3 papers →

loss of function · disease · Viridiplantae (plants)Positive and negative results

15 papers: 5 positive, 10 negative or no effect

4 papers in the same direction as this paper · 10 in the opposite direction

  1. negative
  2. negative
  3. negative

11 papers more in this group

See all 15 papers →

loss of function · growth · Viridiplantae (plants)Positive and negative results

16 papers: 7 positive, 9 negative or no effect

6 papers in the same direction as this paper · 9 in the opposite direction

  1. negative
  2. negative
  3. negative

12 papers more in this group

See all 16 papers →

loss of function · molecular: expression · Viridiplantae (plants)Positive and negative results

16 papers: 3 positive, 13 negative or no effect

2 papers in the same direction as this paper · 13 in the opposite direction

  1. no effect
  2. negative
  3. negative

12 papers more in this group

See all 16 papers →

loss of function · cytology · Viridiplantae (plants)Results agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.