Paper · 2013 · American Journal of Plant Sciences

Functional Aspects of Silencing and Transient Expression of psbS in Nicotiana benthamiana

Richard B. Peterson; Hillar Eichelmann; Vello Oja; et al.

5
claims
10
verbatim quotes
1
citations
2
research areas
✓
Open access · cc-by

Abstract

MicroRNA-based gene silencing is a functional genomics tool for a wide range of eukaryotes. As a basis for broader application of virus-induced gene silencing (VIGS) to photosynthesis research, we employed a tobacco rattle virus (TRV) vector to silence expression of the nuclear psbS gene in Nicotiana benthamiana. The 22-kiloDalton psbS protein is essential for xanthophyll-and H + -dependent thermal dissipation of excitation in higher plants widely known as nonphotochemical quenching (NPQ). Controls treated with the TRV-VIGS vector containing a bacterial chloramphenicol resistance gene as the silencing target were included to test for non-silencing effects of the viral vector system. PsbS protein was undetectable and both psbS mRNA transcript levels and NPQ capacity were dramatically reduced in new leaf tissue of VIGS-psbS plants only. Photosynthetic performance in TRV-VIGS-treated and uninfiltrated plants was assessed by application of CO 2 exchange, chlorophyll fluorescence, and in vivo absorbance changes at 810 nm. TRV-VIGS caused a mild stress based on pigment content and light absorption characteristics in some cases. To assess transient complementation of NPQ, the endogenous psbS gene was silenced using only the transit sequence in the TRV vector followed by Agrobacterium-mediated transient expression of a modified gene consisting of an altered transit sequence fused to the native mature protein sequence. Nevertheless, NPQ in infused fully expanded leaves that expressed this re-introduced form was not fully restored indicating the possible importance of psbS incorporation prior to formation of grana stacks.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 5

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

VIGS-psbS rendered PsbS protein undetectable in new leaf tissue.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Organ / stage
new leaf tissuee0
Treatment
VIGS-psbSe0
Gene
PsbS proteine0
Outcome
PsbS proteine0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“PsbS protein was undetectable and both psbS mRNA transcript levels and NPQ capacity were dramatically reduced in new leaf tissue of VIGS-psbS plants only.”

✓ located verbatim in the source · abstract, characters 692–846 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 78–99 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

VIGS-psbS dramatically reduced psbS mRNA transcript levels in new leaf tissue.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Organ / stage
new leaf tissuee0
Treatment
VIGS-psbSe0
Gene
psbSe0
Outcome
psbS mRNA transcript levelse0
Direction
dramatically reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“PsbS protein was undetectable and both psbS mRNA transcript levels and NPQ capacity were dramatically reduced in new leaf tissue of VIGS-psbS plants only.”

✓ located verbatim in the source · abstract, characters 692–846 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 78–99 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

VIGS-psbS dramatically reduced NPQ capacity in new leaf tissue.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Organ / stage
new leaf tissuee0
Treatment
VIGS-psbSe0
Gene
psbSe0
Outcome
NPQ capacitye0
Direction
dramatically reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“PsbS protein was undetectable and both psbS mRNA transcript levels and NPQ capacity were dramatically reduced in new leaf tissue of VIGS-psbS plants only.”

✓ located verbatim in the source · abstract, characters 692–846 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 78–99 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TRV-VIGS caused mild stress in some cases based on pigment content and light absorption.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
TRV-VIGSe0
Outcome
mild stresse0
Qualifier
in some casese0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“TRV-VIGS caused a mild stress based on pigment content and light absorption characteristics in some cases.”

✓ located verbatim in the source · abstract, characters 1033–1139 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 78–99 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

NPQ was not fully restored after transient expression of the reintroduced psbS form.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Organ / stage
fully expanded leavese0
Treatment
re-introduced forme0
Gene
psbSe0
Outcome
NPQe0
Direction
not fully restorede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nevertheless, NPQ in infused fully expanded leaves that expressed this re-introduced form was not fully restored indicating the possible importance of psbS incorporation prior to formation of grana stacks.”

✓ located verbatim in the source · abstract, characters 1434–1639 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 78–99 · show in text ↑

loss of function · quality: protein · Nicotiana benthamianaPositive and negative results

14 papers: 4 positive, 10 negative or no effect

9 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

10 papers more in this group

See all 14 papers →

loss of function · molecular: expression · Nicotiana benthamianaPositive and negative results

43 papers: 19 positive, 24 negative or no effect

23 papers in the same direction as this paper · 19 in the opposite direction

  1. positive
  2. positive
  3. positive

39 papers more in this group

See all 43 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.