Paper · 2015 · The Plant Cell

Cytoplastic Glyceraldehyde-3-Phosphate Dehydrogenases Interact with ATG3 to Negatively Regulate Autophagy and Immunity in Nicotiana benthamiana

Shaojie Han; Yan Wang; Xiyin Zheng; et al.

8
claims
16
verbatim quotes
216
citations
3
research areas
✓
Open access

Abstract

Autophagy as a conserved catabolic pathway can respond to reactive oxygen species (ROS) and plays an important role in degrading oxidized proteins in plants under various stress conditions. However, how ROS regulates autophagy in response to oxidative stresses is largely unknown. Here, we show that autophagy-related protein 3 (ATG3) interacts with the cytosolic glyceraldehyde-3-phosphate dehydrogenases (GAPCs) to regulate autophagy in Nicotiana benthamiana plants. We found that oxidative stress inhibits the interaction of ATG3 with GAPCs. Silencing of GAPCs significantly activates ATG3-dependent autophagy, while overexpression of GAPCs suppresses autophagy in N. benthamiana plants. Moreover, silencing of GAPCs enhances N gene-mediated cell death and plant resistance against both incompatible pathogens Tobacco mosaic virus and Pseudomonas syringae pv tomato DC3000, as well as compatible pathogen P. syringae pv tabaci. These results indicate that GAPCs have multiple functions in the regulation of autophagy, hypersensitive response, and plant innate immunity.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

ATG3 interacted with GAPCs in plants.

Taxon
Nicotiana benthamianaNicotiana benthamianae0
Gene
ATG3e0
Outcome
interacts with the cytosolic glyceraldehyde-3-phosphate dehydrogenases (GAPCs)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 122–143 · show in text ↑
e0

“autophagy-related protein 3 (ATG3) interacts with the cytosolic glyceraldehyde-3-phosphate dehydrogenases (GAPCs) to regulate autophagy in Nicotiana benthamiana plants”

✓ located verbatim in the source · abstract, characters 300–467 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Oxidative stress inhibited ATG3 interaction with GAPCs.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
oxidative stresse0
Gene
ATG3e0
Outcome
interaction of ATG3 with GAPCse0
Direction
inhibitse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 122–143 · show in text ↑
e0

“oxidative stress inhibits the interaction of ATG3 with GAPCs”

✓ located verbatim in the source · abstract, characters 483–543 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

GAPC silencing significantly activated ATG3-dependent autophagy.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
Silencing of GAPCse0
Gene
GAPCse0
Outcome
ATG3-dependent autophagye0
Direction
activatese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 122–143 · show in text ↑
e0

“Silencing of GAPCs significantly activates ATG3-dependent autophagy”

✓ located verbatim in the source · abstract, characters 545–612 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

GAPC overexpression suppressed autophagy.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
overexpression of GAPCse0
Gene
GAPCse0
Outcome
autophagye0
Direction
suppressese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 122–143 · show in text ↑
e0

“overexpression of GAPCs suppresses autophagy in N. benthamiana plants”

✓ located verbatim in the source · abstract, characters 620–689 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

GAPC silencing enhanced N gene-mediated cell death.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
silencing of GAPCse0
Gene
N genee0
Outcome
N gene-mediated cell deathe0
Direction
enhancese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 122–143 · show in text ↑
e0

“silencing of GAPCs enhances N gene-mediated cell death”

✓ located verbatim in the source · abstract, characters 701–755 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

GAPC silencing enhanced resistance to Tobacco mosaic virus.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
silencing of GAPCse0
Interactor
Tobacco mosaic virusTobacco mosaic viruse0pathogen
Outcome
plant resistancee0
Direction
enhancese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Tobacco mosaic virus
Tobacco mosaic virus · InteractorFrank Vincentz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 122–143 · show in text ↑
e0

“silencing of GAPCs enhances N gene-mediated cell death and plant resistance against both incompatible pathogens Tobacco mosaic virus and Pseudomonas syringae pv tomato DC3000, as well as compatible pathogen P. syringae pv tabaci”

✓ located verbatim in the source · abstract, characters 701–929 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

GAPC silencing enhanced resistance to Pseudomonas syringae pv tomato DC3000.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
silencing of GAPCse0
Interactor
Pseudomonas syringae pv tomato DC3000Pseudomonas syringaee0pathogen
Outcome
plant resistancee0
Direction
enhancese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 122–143 · show in text ↑
e0

“silencing of GAPCs enhances N gene-mediated cell death and plant resistance against both incompatible pathogens Tobacco mosaic virus and Pseudomonas syringae pv tomato DC3000, as well as compatible pathogen P. syringae pv tabaci”

✓ located verbatim in the source · abstract, characters 701–929 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

GAPC silencing enhanced resistance to P. syringae pv tabaci.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
silencing of GAPCse0
Interactor
P. syringae pv tabaciPseudomonas syringaee0pathogen
Outcome
plant resistancee0
Direction
enhancese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 122–143 · show in text ↑
e0

“silencing of GAPCs enhances N gene-mediated cell death and plant resistance against both incompatible pathogens Tobacco mosaic virus and Pseudomonas syringae pv tomato DC3000, as well as compatible pathogen P. syringae pv tabaci”

✓ located verbatim in the source · abstract, characters 701–929 · show in text ↑

loss of function · Pseudomonas syringae · Nicotiana benthamianaPositive and negative results

5 papers: 1 positive, 4 negative or no effect

4 in the opposite direction

  1. negative
  2. negative
  3. negative

1 paper more in this group

See all 5 papers →

loss of function · Tobacco mosaic virus · Nicotiana benthamianaPositive and negative results

21 papers: 8 positive, 13 negative or no effect

7 papers in the same direction as this paper · 13 in the opposite direction

  1. positive
  2. negative
  3. negative

17 papers more in this group

See all 21 papers →

loss of function · molecular: expression · Nicotiana benthamianaPositive and negative results

43 papers: 19 positive, 24 negative or no effect

18 papers in the same direction as this paper · 24 in the opposite direction

  1. negative
  2. negative
  3. negative

39 papers more in this group

See all 43 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.