Paper · 2006 · Molecular Plant-Microbe Interactions

Sinorhizobium fredii HH103 Mutants Affected in Capsular Polysaccharide (KPS) are Impaired for Nodulation with Soybean and Cajanus cajan

Maribel Parada; José M. Vinardell; Francisco J. Ollero; et al.

8
claims
13
verbatim quotes
71
citations
2
research areas
✓
Open access

Abstract

The Sinorhizobium fredii HH103 rkp-1 region, which is involved in capsular polysaccharides (KPS) production, was isolated and sequenced. The organization of the S. fredii genes identified, rkpUAGHIJ and kpsF3, was identical to that described for S. meliloti 1021 but different from that of S. meliloti AK631. The long rkpA gene (7.5 kb) of S. fredii HH103 and S. meliloti 1021 appears as a fusion of six clustered AK631 genes, rkpABCDEF. S. fredii HH103-Rif(r) mutants affected in rkpH or rkpG were constructed. An exoA mutant unable to produce exopolysaccharide (EPS) and a double mutant exoA rkpH also were obtained. Glycine max (soybean) and Cajanus cajan (pigeon pea) plants inoculated with the rkpH, rkpG, and rkpH exoA derivatives of S. fredii HH103 showed reduced nodulation and severe symptoms of nitrogen starvation. The symbiotic capacity of the exoA mutant was not significantly altered. All these results indicate that KPS, but not EPS, is of crucial importance for the symbiotic capacity of S. fredii HH103-Rif(r). S. meliloti strains that produce only EPS or KPS are still effective with alfalfa. In S. fredii HH103, however, EPS and KPS are not equivalent, because mutants in rkp genes are symbiotically impaired regardless of whether or not EPS is produced.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

The S. fredii rkp-1 region was isolated and sequenced.

Taxon
SoybeanGlycine maxt0
Interactor
Sinorhizobium fredii HH103Sinorhizobium fredii HH103e0symbiont
Outcome
rkp-1 region, which is involved in capsular polysaccharides (KPS) production, was isolated and sequencede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Soybean and Cajanus cajan”

✓ located verbatim in the source · title, characters 110–135 · show in text ↑
e0

“The Sinorhizobium fredii HH103 rkp-1 region, which is involved in capsular polysaccharides (KPS) production, was isolated and sequenced.”

✓ located verbatim in the source · abstract, characters 0–136 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The identified S. fredii genes had the same organization as S. meliloti 1021 and a different organization from AK631.

Taxon
SoybeanGlycine maxt0
Gene
rkpUAGHIJ and kpsF3e0
Outcome
identical to that described for S. meliloti 1021 but different from that of S. meliloti AK631e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Soybean and Cajanus cajan”

✓ located verbatim in the source · title, characters 110–135 · show in text ↑
e0

“The organization of the S. fredii genes identified, rkpUAGHIJ and kpsF3, was identical to that described for S. meliloti 1021 but different from that of S. meliloti AK631.”

✓ located verbatim in the source · abstract, characters 137–308 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The S. fredii rkpA gene appears to fuse six AK631 genes.

Taxon
SoybeanGlycine maxt0
Gene
rkpAe0
Outcome
appears as a fusion of six clustered AK631 genes, rkpABCDEFe0
Value
7.5 kbe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Soybean and Cajanus cajan”

✓ located verbatim in the source · title, characters 110–135 · show in text ↑
e0

“The long rkpA gene (7.5 kb) of S. fredii HH103 and S. meliloti 1021 appears as a fusion of six clustered AK631 genes, rkpABCDEF.”

✓ located verbatim in the source · abstract, characters 309–437 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Soybean inoculated with the rkpH, rkpG and rkpH exoA derivatives had reduced nodulation and severe nitrogen starvation.

Taxon
Glycine max (soybean)Glycine maxe0
Treatment
inoculated with the rkpH, rkpG, and rkpH exoA derivatives of S. fredii HH103e0
Interactor
S. fredii HH103Sinorhizobium frediie0symbiont
Outcome
nodulation and severe symptoms of nitrogen starvatione0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Sinorhizobium fredii
Sinorhizobium fredii · Interactor · picture from its Wikimedia Commons categoryNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Glycine max (soybean) and Cajanus cajan (pigeon pea) plants inoculated with the rkpH, rkpG, and rkpH exoA derivatives of S. fredii HH103 showed reduced nodulation and severe symptoms of nitrogen starvation.”

✓ located verbatim in the source · abstract, characters 619–825 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Pigeon pea inoculated with the rkpH, rkpG and rkpH exoA derivatives had reduced nodulation and severe nitrogen starvation.

Taxon
Cajanus cajan (pigeon pea)Cajanus cajane0
Treatment
inoculated with the rkpH, rkpG, and rkpH exoA derivatives of S. fredii HH103e0
Interactor
S. fredii HH103Sinorhizobium frediie0symbiont
Outcome
nodulation and severe symptoms of nitrogen starvatione0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cajanus cajan
Cajanus cajan · TaxonFilo gèn' · CC BY-SA 4.0 · Wikimedia Commons ↗
Sinorhizobium fredii
Sinorhizobium fredii · Interactor · picture from its Wikimedia Commons categoryNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Glycine max (soybean) and Cajanus cajan (pigeon pea) plants inoculated with the rkpH, rkpG, and rkpH exoA derivatives of S. fredii HH103 showed reduced nodulation and severe symptoms of nitrogen starvation.”

✓ located verbatim in the source · abstract, characters 619–825 · show in text ↑
Observationobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

The exoA mutant did not significantly alter symbiotic capacity.

Taxon
SoybeanGlycine maxt0
Material
exoA mutante0
Outcome
symbiotic capacitye0
Direction
not significantly alterede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Soybean and Cajanus cajan”

✓ located verbatim in the source · title, characters 110–135 · show in text ↑
e0

“The symbiotic capacity of the exoA mutant was not significantly altered.”

✓ located verbatim in the source · abstract, characters 826–898 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer KPS is crucial for S. fredii symbiotic capacity whereas EPS is not.

Taxon
SoybeanGlycine maxt0
Interactor
S. fredii HH103-Rif(r)Sinorhizobium frediie0symbiont
Outcome
symbiotic capacity of S. fredii HH103-Rif(r)e0
Qualifier
KPS, but not EPS, is of crucial importancee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Sinorhizobium fredii
Sinorhizobium fredii · Interactor · picture from its Wikimedia Commons categoryNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Soybean and Cajanus cajan”

✓ located verbatim in the source · title, characters 110–135 · show in text ↑
e0

“All these results indicate that KPS, but not EPS, is of crucial importance for the symbiotic capacity of S. fredii HH103-Rif(r).”

✓ located verbatim in the source · abstract, characters 899–1027 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

S. meliloti strains producing only EPS or KPS remained effective with alfalfa.

Taxon
alfalfaMedicago sativae0
Interactor
S. melilotiSinorhizobium melilotie0symbiont
Outcome
still effective with alfalfae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗
Sinorhizobium meliloti
Sinorhizobium meliloti · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“S. meliloti strains that produce only EPS or KPS are still effective with alfalfa.”

✓ located verbatim in the source · abstract, characters 1028–1110 · show in text ↑

Sinorhizobium fredii · disease · Glycine max (soybean)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

inoculation · disease · Cajanus cajan (pigeon pea)Positive and negative results

10 papers: 6 positive, 4 negative or no effect

3 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. positive
  3. positive

6 papers more in this group

See all 10 papers →

inoculation · disease · Glycine max (soybean)Positive and negative results

127 papers: 60 positive, 67 negative or no effect

66 papers in the same direction as this paper · 60 in the opposite direction

  1. positive
  2. positive
  3. positive

123 papers more in this group

See all 127 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.