Paper · 2013 · PLoS ONE

Characterizing the Crucial Components of Iron Homeostasis in the Maize Mutants ys1 and ys3

Tomoko Nozoye; Hiromi Nakanishi; Naoko K. Nishizawa

10
claims
18
verbatim quotes
61
citations
2
research areas
✓
Open access · cc-by

Abstract

To acquire iron (Fe), graminaceous plants secrete mugineic acid family phytosiderophores through the phytosiderophore efflux transporter TOM1 and take up Fe in the form of Fe(III)-phytosiderophore complexes. Yellow stripe 1 (ys1) and ys3 are recessive mutants of maize (Zea mays L.) that show typical symptoms of Fe deficiency, i.e., interveinal chlorosis of the leaves. The ys1 mutant is defective in the Fe(III)-phytosiderophore transporter YS1 and is therefore unable to take up Fe(III)-phytosiderophore complexes. While the ys3 mutant has been shown to be defective in phytosiderophores release, the causative gene has not been identified. The present study was performed to characterize the expression profiles of the genes in ys1 and ys3 mutants to extend our understanding of Fe homeostasis in maize. Using quantitative real-time polymerase chain reaction, we assessed changes in the levels of gene expression in response to Fe deficiency of genes involved in Fe homeostasis, such as those related to phytosiderophore biosynthesis and Fe transport. As with other crops, these Fe deficiency-inducible genes were also upregulated in maize. In addition, these Fe deficiency-inducible genes were upregulated in both the ys1 and ys3 mutants, even under Fe-sufficient conditions. Indeed, the Fe concentrations in the roots of ys1 and ys3 plants were lower than that of wild-type controls. These results suggest that ys1 and ys3 are Fe-deficient during growth in the presence of Fe. In agreement with previous reports, the level of YS1 expression decreased in the ys1 mutant. Moreover, the expression level of a homolog of TOM1 in maize decreased significantly in the ys3 mutant. Unspliced introns of ZmTOM1 were detected only in ys3, and not in YS1YS3 or ys1, suggesting that ZmTOM1 may be involved in the ys3 phenotype.

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Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

Iron deficiency inducible genes were upregulated in maize under iron deficiency.

Taxon
maizeZea mayse0
Outcome
Fe deficiency-inducible genese0
Direction
upregulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“these Fe deficiency-inducible genes were also upregulated in maize”

✓ located verbatim in the source · abstract, characters 1077–1143 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Iron deficiency inducible genes were upregulated in ys1 even under iron sufficient conditions.

Taxon
maizeZea mayse1
Material
ys1e0
Outcome
Fe deficiency-inducible genese0
Direction
upregulatede0
Qualifier
Fe-sufficient conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“these Fe deficiency-inducible genes were upregulated in both the ys1 and ys3 mutants, even under Fe-sufficient conditions”

✓ located verbatim in the source · abstract, characters 1158–1279 · show in text ↑
e1

“mutants of maize (Zea mays L.)”

✓ located verbatim in the source · abstract, characters 252–282 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Iron deficiency inducible genes were upregulated in ys3 even under iron sufficient conditions.

Taxon
maizeZea mayse1
Material
ys3e0
Outcome
Fe deficiency-inducible genese0
Direction
upregulatede0
Qualifier
Fe-sufficient conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“these Fe deficiency-inducible genes were upregulated in both the ys1 and ys3 mutants, even under Fe-sufficient conditions”

✓ located verbatim in the source · abstract, characters 1158–1279 · show in text ↑
e1

“mutants of maize (Zea mays L.)”

✓ located verbatim in the source · abstract, characters 252–282 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Root iron concentration was lower in ys1 than wild type maize.

Taxon
maizeZea mayse1
Material
ys1e0
Organ / stage
rootse0
Outcome
Fe concentrationse0
Direction
lowere0
Comparator
wild-type controlse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the Fe concentrations in the roots of ys1 and ys3 plants were lower than that of wild-type controls”

✓ located verbatim in the source · abstract, characters 1289–1388 · show in text ↑
e1

“mutants of maize (Zea mays L.)”

✓ located verbatim in the source · abstract, characters 252–282 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Root iron concentration was lower in ys3 than wild type maize.

Taxon
maizeZea mayse1
Material
ys3e0
Organ / stage
rootse0
Outcome
Fe concentrationse0
Direction
lowere0
Comparator
wild-type controlse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the Fe concentrations in the roots of ys1 and ys3 plants were lower than that of wild-type controls”

✓ located verbatim in the source · abstract, characters 1289–1388 · show in text ↑
e1

“mutants of maize (Zea mays L.)”

✓ located verbatim in the source · abstract, characters 252–282 · show in text ↑
Observationauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

The authors infer that ys1 and ys3 are iron deficient even with iron present.

Taxon
maizeZea mayse1
Material
ys1 and ys3e0
Outcome
Fe-deficiente0
Qualifier
during growth in the presence of Fee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ys1 and ys3 are Fe-deficient during growth in the presence of Fe”

✓ located verbatim in the source · abstract, characters 1417–1481 · show in text ↑
e1

“Fe homeostasis in maize”

✓ located verbatim in the source · abstract, characters 783–806 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

YS1 expression decreased in the ys1 maize mutant.

Taxon
maizeZea mayse1
Material
ys1 mutante0
Gene
YS1e0
Outcome
YS1 expressione0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the level of YS1 expression decreased in the ys1 mutant”

✓ located verbatim in the source · abstract, characters 1519–1574 · show in text ↑
e1

“Fe homeostasis in maize”

✓ located verbatim in the source · abstract, characters 783–806 · show in text ↑
Observationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

The maize TOM1 homolog had significantly decreased expression in ys3.

Taxon
maizeZea mayse0
Material
ys3 mutante0
Gene
TOM1e0
Outcome
expression level of a homolog of TOM1e0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the expression level of a homolog of TOM1 in maize decreased significantly in the ys3 mutant”

✓ located verbatim in the source · abstract, characters 1586–1678 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Unspliced ZmTOM1 introns were detected only in ys3.

Taxon
maizeZea mayse1
Material
ys3e0
Gene
ZmTOM1e0
Outcome
Unspliced introns of ZmTOM1e0
Comparator
YS1YS3 or ys1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Unspliced introns of ZmTOM1 were detected only in ys3, and not in YS1YS3 or ys1”

✓ located verbatim in the source · abstract, characters 1680–1759 · show in text ↑
e1

“Fe homeostasis in maize”

✓ located verbatim in the source · abstract, characters 783–806 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors suggest ZmTOM1 involvement in the ys3 phenotype.

Taxon
maizeZea mayse1
Material
ys3e0
Gene
ZmTOM1e0
Outcome
ys3 phenotypee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmTOM1 may be involved in the ys3 phenotype”

✓ located verbatim in the source · abstract, characters 1777–1820 · show in text ↑
e1

“Fe homeostasis in maize”

✓ located verbatim in the source · abstract, characters 783–806 · show in text ↑