Paper · 1977 · PLANT PHYSIOLOGY

DNA Binding and Uptake by Nuclei Isolated from Plant Protoplasts

Kanji Ohyama; Lawrence E. Pelcher; Dave Horn

15
claims
31
verbatim quotes
16
citations
1
research areas
✓
Open access

Abstract

DNA binding and uptake by nuclei isolated from soybean (Glycine max L. Merr.) protoplasts were investigated using radioactive homogeneous DNA prepared from soybean cells. DNA binding to nuclei was found to decrease drastically with increased incubation time. Total uptake and acid-precipitable uptake reached a maximum after 20 minutes of incubation. Optimum DNA binding and uptake occurred at pH 6 and the process was enhanced by increasing the incubation temperature to 40 C. Salmonella typhimurium DNA and poly ([dA-dT]-[dA-dT]) competitively inhibited DNA binding whereas calf thymus DNA was less competitive; however, Micrococcus lysodeikticus DNA stimulated DNA binding and tobacco mosaic virus RNA had no effect. DNA binding and uptake was enhanced by addition of Mg ions, Ca ions, poly-l-lysine, and ATP. Increasing amounts of EDTA appeared to decrease DNA binding. Pronase strongly inhibited DNA binding and uptake.

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Claims 15

Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

DNA binding decreased drastically with increased incubation time.

Taxon
soybeanGlycine maxe1
Treatment
increased incubation timee0
Outcome
DNA bindinge0
Direction
decrease drasticallye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“DNA binding to nuclei was found to decrease drastically with increased incubation time”

✓ located verbatim in the source · abstract, characters 171–257 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Total and acid-precipitable DNA uptake peaked after 20 minutes.

Taxon
soybeanGlycine maxe1
Outcome
Total uptake and acid-precipitable uptakee0
Direction
maximume0
Value
20 minutese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Total uptake and acid-precipitable uptake reached a maximum after 20 minutes of incubation”

✓ located verbatim in the source · abstract, characters 259–349 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

DNA binding and uptake were optimum at pH 6.

Taxon
soybeanGlycine maxe1
Outcome
DNA binding and uptakee0
Direction
Optimume0
Value
pH 6e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Optimum DNA binding and uptake occurred at pH 6”

✓ located verbatim in the source · abstract, characters 351–398 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Increasing incubation temperature to 40 C enhanced DNA binding and uptake.

Taxon
soybeanGlycine maxe1
Treatment
increasing the incubation temperature to 40 Ce0
Outcome
the processe0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“the process was enhanced by increasing the incubation temperature to 40 C”

✓ located verbatim in the source · abstract, characters 403–476 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salmonella typhimurium DNA competitively inhibited DNA binding.

Taxon
soybeanGlycine maxe1
Treatment
Salmonella typhimurium DNAe0
Outcome
DNA bindinge0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Salmonella typhimurium DNA and poly ([dA-dT]-[dA-dT]) competitively inhibited DNA binding”

✓ located verbatim in the source · abstract, characters 478–567 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Poly ([dA-dT]-[dA-dT]) competitively inhibited DNA binding.

Taxon
soybeanGlycine maxe1
Treatment
poly ([dA-dT]-[dA-dT])e0
Outcome
DNA bindinge0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Salmonella typhimurium DNA and poly ([dA-dT]-[dA-dT]) competitively inhibited DNA binding”

✓ located verbatim in the source · abstract, characters 478–567 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Calf thymus DNA was less competitive in DNA binding.

Taxon
soybeanGlycine maxe1
Treatment
calf thymus DNAe0
Outcome
competitivee0
Direction
lesse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“calf thymus DNA was less competitive”

✓ located verbatim in the source · abstract, characters 576–612 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Micrococcus lysodeikticus DNA stimulated DNA binding.

Taxon
soybeanGlycine maxe1
Treatment
Micrococcus lysodeikticus DNAe0
Outcome
DNA bindinge0
Direction
stimulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Micrococcus lysodeikticus DNA stimulated DNA binding”

✓ located verbatim in the source · abstract, characters 623–675 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Tobacco mosaic virus RNA had no effect on DNA binding.

Taxon
soybeanGlycine maxe1
Treatment
tobacco mosaic virus RNAe0
Outcome
DNA bindinge2
Direction
no effecte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“tobacco mosaic virus RNA had no effect”

✓ located verbatim in the source · abstract, characters 680–718 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
e2

“Micrococcus lysodeikticus DNA stimulated DNA binding”

✓ located verbatim in the source · abstract, characters 623–675 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Mg ions enhanced DNA binding and uptake.

Taxon
soybeanGlycine maxe1
Treatment
Mg ionse0
Outcome
DNA binding and uptakee0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“DNA binding and uptake was enhanced by addition of Mg ions, Ca ions, poly-l-lysine, and ATP”

✓ located verbatim in the source · abstract, characters 720–811 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ca ions enhanced DNA binding and uptake.

Taxon
soybeanGlycine maxe1
Treatment
Ca ionse0
Outcome
DNA binding and uptakee0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“DNA binding and uptake was enhanced by addition of Mg ions, Ca ions, poly-l-lysine, and ATP”

✓ located verbatim in the source · abstract, characters 720–811 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Poly-l-lysine enhanced DNA binding and uptake.

Taxon
soybeanGlycine maxe1
Treatment
poly-l-lysinee0
Outcome
DNA binding and uptakee0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“DNA binding and uptake was enhanced by addition of Mg ions, Ca ions, poly-l-lysine, and ATP”

✓ located verbatim in the source · abstract, characters 720–811 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ATP enhanced DNA binding and uptake.

Taxon
soybeanGlycine maxe1
Treatment
ATPe0
Outcome
DNA binding and uptakee0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“DNA binding and uptake was enhanced by addition of Mg ions, Ca ions, poly-l-lysine, and ATP”

✓ located verbatim in the source · abstract, characters 720–811 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Increasing EDTA appeared to decrease DNA binding.

Taxon
soybeanGlycine maxe1
Treatment
Increasing amounts of EDTAe0
Outcome
DNA bindinge0
Direction
decreasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Increasing amounts of EDTA appeared to decrease DNA binding”

✓ located verbatim in the source · abstract, characters 813–872 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Pronase strongly inhibited DNA binding and uptake.

Taxon
soybeanGlycine maxe1
Treatment
Pronasee0
Outcome
DNA binding and uptakee0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Pronase strongly inhibited DNA binding and uptake”

✓ located verbatim in the source · abstract, characters 874–923 · show in text ↑
e1

“soybean (Glycine max L. Merr.) protoplasts”

✓ located verbatim in the source · abstract, characters 47–89 · show in text ↑

magnesium atom · nutrient: content · Glycine max (soybean)Positive and negative results

15 papers: 11 positive, 4 negative or no effect

10 papers in the same direction as this paper · 4 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

11 papers more in this group

See all 15 papers →

calcium atom · nutrient: content · Glycine max (soybean)Positive and negative results

16 papers: 12 positive, 4 negative or no effect

11 papers in the same direction as this paper · 3 in the opposite direction · 1 reporting no difference from an alternative

  1. negative
  2. negative
  3. negative

12 papers more in this group

See all 16 papers →

ATP · nutrient: content · Glycine max (soybean)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.