Paper · 2013 · PLoS Genetics

Genetic Requirements for Signaling from an Autoactive Plant NB-LRR Intracellular Innate Immune Receptor

Melinda Roberts; Saijun Tang; Anna Stallmann; et al.

15
claims
30
verbatim quotes
115
citations
4
research areas
✓
Open access · cc-by

Abstract

Plants react to pathogen attack via recognition of, and response to, pathogen-specific molecules at the cell surface and inside the cell. Pathogen effectors (virulence factors) are monitored by intracellular nucleotide-binding leucine-rich repeat (NB-LRR) sensor proteins in plants and mammals. Here, we study the genetic requirements for defense responses of an autoactive mutant of ADR1-L2, an Arabidopsis coiled-coil (CC)-NB-LRR protein. ADR1-L2 functions upstream of salicylic acid (SA) accumulation in several defense contexts, and it can act in this context as a "helper" to transduce specific microbial activation signals from "sensor" NB-LRRs. This helper activity does not require an intact P-loop. ADR1-L2 and another of two closely related members of this small NB-LRR family are also required for propagation of unregulated runaway cell death (rcd) in an lsd1 mutant. We demonstrate here that, in this particular context, ADR1-L2 function is P-loop dependent. We generated an autoactive missense mutation, ADR1-L2D484V, in a small homology motif termed MHD. Expression of ADR1-L2D848V leads to dwarfed plants that exhibit increased disease resistance and constitutively high SA levels. The morphological phenotype also requires an intact P-loop, suggesting that these ADR1-L2D484V phenotypes reflect canonical activation of this NB-LRR protein. We used ADR1-L2D484V to define genetic requirements for signaling. Signaling from ADR1-L2D484V does not require NADPH oxidase and is negatively regulated by EDS1 and AtMC1. Transcriptional regulation of ADR1-L2D484V is correlated with its phenotypic outputs; these outputs are both SA-dependent and -independent. The genetic requirements for ADR1-L2D484V activity resemble those that regulate an SA-gradient-dependent signal amplification of defense and cell death signaling initially observed in the absence of LSD1. Importantly, ADR1-L2D484V autoactivation signaling is controlled by both EDS1 and SA in separable, but linked pathways. These data allows us to propose a genetic model that provides insight into an SA-dependent feedback regulation loop, which, surprisingly, includes ADR1-L2.

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Claims 15

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ADR1-L2 acts upstream of salicylic acid accumulation in defense contexts.

Taxon
ArabidopsisArabidopsise1
Gene
ADR1-L2e0
Outcome
salicylic acid (SA) accumulatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ADR1-L2 functions upstream of salicylic acid (SA) accumulation in several defense contexts”

✓ located verbatim in the source · abstract, characters 441–531 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ADR1-L2 can act as a helper for microbial activation signals from sensor NB-LRRs.

Taxon
ArabidopsisArabidopsise1
Gene
NB-LRRse0
Outcome
transduce specific microbial activation signalse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“it can act in this context as a "helper" to transduce specific microbial activation signals from "sensor" NB-LRRs”

✓ located verbatim in the source · abstract, characters 537–650 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Helper activity does not require an intact P-loop.

Taxon
ArabidopsisArabidopsise1
Gene
P-loope0
Outcome
helper activitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This helper activity does not require an intact P-loop”

✓ located verbatim in the source · abstract, characters 652–706 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ADR1-L2 and a related family member are required for runaway cell death in lsd1.

Taxon
ArabidopsisArabidopsise1
Gene
ADR1-L2e0
Outcome
propagation of unregulated runaway cell death (rcd)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ADR1-L2 and another of two closely related members of this small NB-LRR family are also required for propagation of unregulated runaway cell death (rcd) in an lsd1 mutant”

✓ located verbatim in the source · abstract, characters 708–878 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ADR1-L2 function in runaway cell death requires its P-loop.

Taxon
ArabidopsisArabidopsise1
Gene
ADR1-L2e0
Outcome
ADR1-L2 functione0
Qualifier
P-loop dependente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“in this particular context, ADR1-L2 function is P-loop dependent”

✓ located verbatim in the source · abstract, characters 906–970 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression of the stated autoactive variant produced dwarfed plants.

Taxon
ArabidopsisArabidopsise1
Treatment
Expression of ADR1-L2D848Ve0
Outcome
dwarfed plantse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of ADR1-L2D848V leads to dwarfed plants”

✓ located verbatim in the source · abstract, characters 1070–1120 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Expression of the stated autoactive variant increased disease resistance.

Taxon
ArabidopsisArabidopsise1
Treatment
Expression of ADR1-L2D848Ve0
Outcome
disease resistancee0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of ADR1-L2D848V leads to dwarfed plants that exhibit increased disease resistance”

✓ located verbatim in the source · abstract, characters 1070–1162 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression of the stated autoactive variant caused constitutively high salicylic acid levels.

Taxon
ArabidopsisArabidopsise1
Treatment
Expression of ADR1-L2D848Ve0
Outcome
SA levelse0
Direction
highe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of ADR1-L2D848V leads to dwarfed plants that exhibit increased disease resistance and constitutively high SA levels”

✓ located verbatim in the source · abstract, characters 1070–1196 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

The morphological phenotype requires an intact P-loop.

Taxon
ArabidopsisArabidopsise1
Gene
P-loope0
Outcome
morphological phenotypee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The morphological phenotype also requires an intact P-loop”

✓ located verbatim in the source · abstract, characters 1198–1256 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ADR1-L2D484V signaling does not require NADPH oxidase.

Taxon
ArabidopsisArabidopsise1
Gene
NADPH oxidasee0
Outcome
Signaling from ADR1-L2D484Ve0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Signaling from ADR1-L2D484V does not require NADPH oxidase”

✓ located verbatim in the source · abstract, characters 1424–1482 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

EDS1 negatively regulates ADR1-L2D484V signaling.

Taxon
ArabidopsisArabidopsise1
Gene
EDS1e0
Outcome
Signaling from ADR1-L2D484Ve0
Direction
negatively regulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Signaling from ADR1-L2D484V does not require NADPH oxidase and is negatively regulated by EDS1 and AtMC1”

✓ located verbatim in the source · abstract, characters 1424–1528 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

AtMC1 negatively regulates ADR1-L2D484V signaling.

Taxon
ArabidopsisArabidopsise1
Gene
AtMC1e0
Outcome
Signaling from ADR1-L2D484Ve0
Direction
negatively regulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Signaling from ADR1-L2D484V does not require NADPH oxidase and is negatively regulated by EDS1 and AtMC1”

✓ located verbatim in the source · abstract, characters 1424–1528 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

ADR1-L2D484V transcriptional regulation correlated with phenotypic outputs.

Taxon
ArabidopsisArabidopsise1
Gene
ADR1-L2D484Ve0
Outcome
phenotypic outputse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Transcriptional regulation of ADR1-L2D484V is correlated with its phenotypic outputs”

✓ located verbatim in the source · abstract, characters 1530–1614 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

The phenotypic outputs include salicylic acid dependent and independent components.

Taxon
ArabidopsisArabidopsise1
Outcome
outputse0
Qualifier
both SA-dependent and -independente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“these outputs are both SA-dependent and -independent”

✓ located verbatim in the source · abstract, characters 1616–1668 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

EDS1 and salicylic acid control autoactive signaling through separable linked pathways.

Taxon
ArabidopsisArabidopsise1
Gene
EDS1e0
Outcome
ADR1-L2D484V autoactivation signalinge0
Qualifier
separable, but linked pathwayse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ADR1-L2D484V autoactivation signaling is controlled by both EDS1 and SA in separable, but linked pathways”

✓ located verbatim in the source · abstract, characters 1888–1993 · show in text ↑
e1

“an Arabidopsis coiled-coil (CC)-NB-LRR protein”

✓ located verbatim in the source · abstract, characters 393–439 · show in text ↑

transgenic · disease · ArabidopsisPositive and negative results

55 papers: 36 positive, 19 negative or no effect

35 papers in the same direction as this paper · 19 in the opposite direction

  1. no effect
  2. negative
  3. negative

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.