Paper · 1999 · PLANT PHYSIOLOGY

Cloning, Expression, and Molecular Characterization of a Small Pea Gene Family Regulated by Low Levels of Ultraviolet B Radiation and Other Stresses

Mikael Brosché; Åke Strid

9
claims
18
verbatim quotes
42
citations
2
research areas
✓
Open access

Abstract

A pea (Pisum sativum) DNA fragment (termed MB3) was isolated by differential display of cDNAs obtained from total leaf RNA of ultraviolet B (UV-B) radiation-treated plants. Longer cDNAs were cloned by rapid amplification of cDNA ends in the 3' to 5' direction. Three different, but very similar, cDNAs were cloned, sadA, sadB, and sadC, the major difference between them being a 36-bp deletion in the coding region of sadB. Southern blotting confirmed the occurrence of at least three genes in the pea genome. Database comparisons of the SAD protein sequences revealed high identity (46%) and similarity (77%) with a putative tomato (Lycopersicon esculentum) short-chain alcohol dehydrogenase. Very low levels of UV-B radiation (the biologically effective radiation normalized to 300 nm = 0.08 W m(-2)) was shown to up-regulate expression, a dose considerably lower than that needed to induce expression of the well-known UV-B defensive chalcone synthase and phenylalanine ammonia lyase genes. RNase protection assay revealed that primarily sadA and sadC mRNA accumulation was enhanced by UV-B. In addition to UV-B irradiation, ozone fumigation, wounding, aluminum stress, and salt stress induced increased transcript levels of the sad genes in pea.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Three similar pea cDNAs, sadA, sadB and sadC, were cloned.

Gene
sadA, sadB, and sadCe0e1
Outcome
cDNAse0e1
Value
Threee0e1
Qualifier
36-bp deletion in the coding region of sadBe0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Three different, but very similar, cDNAs were cloned, sadA, sadB, and sadC, the major difference between them being a 36-bp deletion in the coding region of sadB.”

✓ located verbatim in the source · abstract, characters 261–423 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

At least three genes occurred in the pea genome.

Outcome
genese0e1
Value
at least threee0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Southern blotting confirmed the occurrence of at least three genes in the pea genome.”

✓ located verbatim in the source · abstract, characters 424–509 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pea SAD protein sequences had 46% identity and 77% similarity to a putative tomato short-chain alcohol dehydrogenase.

Gene
SADe0e1
Outcome
identitye0e1
Value
46%e0e1
Qualifier
similarity (77%)e0e1
Comparator
tomato (Lycopersicon esculentum) short-chain alcohol dehydrogenasee0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“SAD protein sequences revealed high identity (46%) and similarity (77%) with a putative tomato (Lycopersicon esculentum) short-chain alcohol dehydrogenase.”

✓ located verbatim in the source · abstract, characters 538–693 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Very low UV-B radiation up-regulated expression in pea.

Treatment
UV-B radiatione0e1
Outcome
expressione0e1
Direction
up-regulatee0e1
Value
0.08 W m(-2)e0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Very low levels of UV-B radiation (the biologically effective radiation normalized to 300 nm = 0.08 W m(-2)) was shown to up-regulate expression”

✓ located verbatim in the source · abstract, characters 694–838 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

UV-B enhanced sadA and sadC mRNA accumulation in pea.

Treatment
UV-Be0e1
Gene
sadA and sadCe0e1
Outcome
mRNA accumulatione0e1
Direction
enhancede0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“primarily sadA and sadC mRNA accumulation was enhanced by UV-B.”

✓ located verbatim in the source · abstract, characters 1031–1094 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ozone fumigation increased sad transcript levels in pea.

Treatment
ozone fumigatione0e1
Gene
sad genese0e1
Outcome
transcript levelse0e1
Direction
increasede0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“ozone fumigation, wounding, aluminum stress, and salt stress induced increased transcript levels of the sad genes in pea.”

✓ located verbatim in the source · abstract, characters 1128–1249 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Wounding increased sad transcript levels in pea.

Treatment
woundinge0e1
Gene
sad genese0e1
Outcome
transcript levelse0e1
Direction
increasede0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“ozone fumigation, wounding, aluminum stress, and salt stress induced increased transcript levels of the sad genes in pea.”

✓ located verbatim in the source · abstract, characters 1128–1249 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Aluminum stress increased sad transcript levels in pea.

Treatment
aluminum stresse0e1
Gene
sad genese0e1
Outcome
transcript levelse0e1
Direction
increasede0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“ozone fumigation, wounding, aluminum stress, and salt stress induced increased transcript levels of the sad genes in pea.”

✓ located verbatim in the source · abstract, characters 1128–1249 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt stress increased sad transcript levels in pea.

Treatment
salt stresse0e1
Gene
sad genese0e1
Outcome
transcript levelse0e1
Direction
increasede0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“ozone fumigation, wounding, aluminum stress, and salt stress induced increased transcript levels of the sad genes in pea.”

✓ located verbatim in the source · abstract, characters 1128–1249 · show in text ↑
e1

“A pea (Pisum sativum) DNA fragment (termed MB3) was isolated”

✓ located verbatim in the source · abstract, characters 0–60 · show in text ↑

radiation · molecular: expression · Lathyrus oleraceus (pea)Positive and negative results

3 papers: 1 positive, 2 negative or no effect

2 in the opposite direction

  1. negative
  2. negative
See all 3 papers →

uv · molecular: expression · Lathyrus oleraceus (pea)Positive and negative results

9 papers: 4 positive, 5 negative or no effect

3 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. negative

5 papers more in this group

See all 9 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.