Paper · 2012 · Annals of Botany

Identification and expression analysis of the Glycine max CYP707A gene family in response to drought and salt stresses

Yan Zheng; Yingyi Huang; Weihao Xian; et al.

10
claims
12
verbatim quotes
58
citations
2
research areas
✓
Open access

Abstract

BACKGROUND AND AIMS: Abscisic acid (ABA) plays crucial roles in plants' responses to abiotic stresses. ABA 8'-hydroxylation controlled by CYP707A genes has been well studied in Arabidopsis and rice, but not in legumes. The aims of the present study were to identify and functionally analyse the soybean CYP707A gene family, and to explore their expression patterns under dehydration and salt stresses. METHODS: A complementation experiment was employed to verify the function of soybean CYP707A1a in ABA catabolism. Genomic and cDNA sequences of other soybean CYP707A genes were isolated from the Phytozome database based on soybean CYP707A1a. The structure and phylogenetic relationship of this gene family was further analysed. The expression patterns of soybean CYP707A genes under dehydration and salt stress were analysed via quantitative real-time PCR. KEY RESULTS: Over-expression of GmCYP707A1a in the atcyp707a2 T-DNA insertion mutant decreased its sensitivity to ABA, indicating that GmCYP707A1a indeed functions as an ABA 8'-hydroxylase in higher plants. The soybean genome contains ten CYP707A genes. Gene structure and phylogenetic analysis showed high conservation of ten GmCYP707A genes to the other CYP707A genes from monocots and dicots. Seed imbibition induced expression of A1a, A1b, A2a, A2b, A2c, A3a and A5 in embryo, and expression of A1a, A1b, A2a and A2b in cotyledon. Dehydration induced expression of A1a, A1b, A2b, A2c, A3a, A3b, A4a, A4b and A5 both in roots and in leaves, whereas rehydration stimulated transcription of A2a, A2b, A3b, A4a and A5 in roots, and only A3b and A5 in leaves. Expression of all soybean CYP707A genes was induced either by short- or by long-term salt stress. CONCLUSIONS: The first biological evidence is provided that GmCYP7071a encodes an ABA 8'-hydroxylase through transgenic studies. Ten soybean GmCYP707A genes were identified, most of them expressed in multiple soybean tissues, and were induced by imbibition, dehydration and salinity.

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Claims 10

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Overexpression of GmCYP707A1a decreased ABA sensitivity in an atcyp707a2 mutant.

Material
atcyp707a2 T-DNA insertion mutante0
Treatment
Over-expression of GmCYP707A1ae0
Gene
GmCYP707A1ae0
Outcome
sensitivity to ABAe0
Direction
decreasede0

Not reportedTaxonComparator

Verbatim

e0

“Over-expression of GmCYP707A1a in the atcyp707a2 T-DNA insertion mutant decreased its sensitivity to ABA”

✓ located verbatim in the source · abstract, characters 872–976 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

GmCYP707A1a was inferred to function as an ABA 8-hydroxylase.

Gene
GmCYP707A1ae0
Outcome
functions as an ABA 8'-hydroxylasee0

Not reportedTaxon

Verbatim

e0

“indicating that GmCYP707A1a indeed functions as an ABA 8'-hydroxylase in higher plants.”

✓ located verbatim in the source · abstract, characters 978–1065 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The soybean genome contains ten CYP707A genes.

Taxon
soybeanGlycine maxe0
Outcome
CYP707A genese0
Value
tene0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“The soybean genome contains ten CYP707A genes.”

✓ located verbatim in the source · abstract, characters 1066–1112 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Ten GmCYP707A genes showed high structural and phylogenetic conservation with monocot and dicot CYP707A genes.

Gene
GmCYP707A genese0
Outcome
high conservatione0
Comparator
other CYP707A genes from monocots and dicotse0

Not reportedTaxon

Verbatim

e0

“Gene structure and phylogenetic analysis showed high conservation of ten GmCYP707A genes to the other CYP707A genes from monocots and dicots.”

✓ located verbatim in the source · abstract, characters 1113–1254 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seed imbibition induced seven named CYP707A genes in embryos.

Organ / stage
embryoe0
Treatment
Seed imbibitione0
Outcome
expression of A1a, A1b, A2a, A2b, A2c, A3a and A5e0
Direction
inducede0

Not reportedTaxonComparator

Verbatim

e0

“Seed imbibition induced expression of A1a, A1b, A2a, A2b, A2c, A3a and A5 in embryo”

✓ located verbatim in the source · abstract, characters 1255–1338 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seed imbibition induced four named CYP707A genes in cotyledons.

Organ / stage
cotyledone0
Treatment
Seed imbibitione1
Outcome
expression of A1a, A1b, A2a and A2be0
Direction
inducede1

Not reportedTaxonComparator

Verbatim

e0

“expression of A1a, A1b, A2a and A2b in cotyledon”

✓ located verbatim in the source · abstract, characters 1344–1392 · show in text ↑
e1

“Seed imbibition induced expression of A1a, A1b, A2a, A2b, A2c, A3a and A5 in embryo”

✓ located verbatim in the source · abstract, characters 1255–1338 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Dehydration induced nine named CYP707A genes in roots and leaves.

Organ / stage
roots and in leavese0
Treatment
Dehydratione0
Outcome
expression of A1a, A1b, A2b, A2c, A3a, A3b, A4a, A4b and A5e0
Direction
inducede0

Not reportedTaxonComparator

Verbatim

e0

“Dehydration induced expression of A1a, A1b, A2b, A2c, A3a, A3b, A4a, A4b and A5 both in roots and in leaves”

✓ located verbatim in the source · abstract, characters 1394–1501 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Rehydration stimulated five named CYP707A genes in roots.

Organ / stage
rootse0
Treatment
rehydratione0
Outcome
transcription of A2a, A2b, A3b, A4a and A5e0
Direction
stimulatede0

Not reportedTaxonComparator

Verbatim

e0

“rehydration stimulated transcription of A2a, A2b, A3b, A4a and A5 in roots”

✓ located verbatim in the source · abstract, characters 1511–1585 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Rehydration stimulated A3b and A5 in leaves.

Organ / stage
leavese0
Treatment
rehydratione1
Outcome
A3b and A5e0
Direction
stimulatede1

Not reportedTaxonComparator

Verbatim

e0

“only A3b and A5 in leaves”

✓ located verbatim in the source · abstract, characters 1591–1616 · show in text ↑
e1

“rehydration stimulated transcription of A2a, A2b, A3b, A4a and A5 in roots”

✓ located verbatim in the source · abstract, characters 1511–1585 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Short or long salt stress induced expression of all soybean CYP707A genes.

Taxon
soybeanGlycine maxe0
Treatment
short- or by long-term salt stresse0
Outcome
Expression of all soybean CYP707A genese0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Expression of all soybean CYP707A genes was induced either by short- or by long-term salt stress.”

✓ located verbatim in the source · abstract, characters 1618–1715 · show in text ↑

salinity · molecular: expression · Glycine max (soybean)Positive and negative results

33 papers: 21 positive, 12 negative or no effect

20 papers in the same direction as this paper · 12 in the opposite direction

  1. negative
  2. no effect
  3. negative

29 papers more in this group

See all 33 papers →

drought · molecular: expression · Glycine max (soybean)Positive and negative results

57 papers: 35 positive, 22 negative or no effect

34 papers in the same direction as this paper · 22 in the opposite direction

  1. positive
  2. no effect
  3. negative

53 papers more in this group

See all 57 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.