Paper · 2006 · Crop Science

Quantitative Trait Loci for Root Architecture Traits Correlated with Phosphorus Acquisition in Common Bean

Stephen E. Beebe; Marcela Rojas‐Pierce; Xiaolong Yan; et al.

7
claims
15
verbatim quotes
233
citations
4
research areas
—
Not open access

Abstract

Low soil P availability is a primary constraint to common bean ( Phaseolus vulgaris L.) production in Latin America and Africa. Substantial genotypic variation in bean adaptation to low phosphorus (LP) availability has been linked with root traits that enhance the efficiency of soil foraging. The objectives of this study were to identify quantitative trait loci (QTLs) for P accumulation and associated root architectural traits, to facilitate genetic improvement and to reveal physiological relationships. Eighty‐six F 5.7 recombinant inbred lines (RILs) were developed from a cross between G19833, an Andean landrace with high total P accumulation, and DOR 364, a Mesoamerican cultivar with low total P accumulation in LP conditions. A genetic map constructed with restriction fragment length polymorphisms (RFLPs), microsatellites, and PCR‐based markers covering 1703 centimorgans (cM) total genetic distance and all eleven linkage groups (LGs) was used for QTL analysis. Seventy‐one RILs were evaluated in the field at high phosphorus (HP) and LP for P accumulation, total root length (RL), specific RL, and plant dry weight (DW), while all 86 RILs were evaluated in a hydroponic system in the greenhouse for tap, basal, total, and specific RL and plant DW. Phosphorus accumulation in the field correlated with root parameters measured in the greenhouse. A total of 26 individual QTLs were identified for P accumulation and associated root characters using composite interval mapping (CIM) analysis. Phosphorus accumulation QTLs often coincided with those for basal root development, thus, basal roots appear to be important in P acquisition. Independent QTLs were identified for basal and taproot development, and for specific RL. Distinct QTLs for greater specific RL had positive, null and negative effects on P accumulation. Our results confirm the importance of root structure for LP adaptation and highlight the need for a more detailed understanding of root architectural traits for phenotypic as well as marker‐aided selection of more P‐efficient crops.

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Claims 7

Associationobservedoriginal resultmeasured

Claim · model-written summary

Field phosphorus accumulation correlated with greenhouse root parameters.

Taxon
Common BeanPhaseolus vulgarist0
Organ / stage
roote0
Outcome
Phosphorus accumulatione0
Setting
fielde0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Phosphorus accumulation in the field correlated with root parameters measured in the greenhouse.”

✓ located verbatim in the source · abstract, characters 1264–1360 · show in text ↑
t0

“Common Bean”

✓ located verbatim in the source · title, characters 95–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Twenty-six QTLs for phosphorus accumulation and root characters were identified.

Taxon
Common BeanPhaseolus vulgarist0
Gene
QTLse0
Outcome
QTLs were identified for P accumulation and associated root characterse0
Value
26 individual QTLse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 26 individual QTLs were identified for P accumulation and associated root characters”

✓ located verbatim in the source · abstract, characters 1361–1456 · show in text ↑
t0

“Common Bean”

✓ located verbatim in the source · title, characters 95–106 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Phosphorus accumulation QTLs often coincided with basal root development QTLs.

Taxon
Common BeanPhaseolus vulgarist0
Organ / stage
basal roote0
Gene
Phosphorus accumulation QTLse0
Outcome
coincided with those for basal root developmente0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Phosphorus accumulation QTLs often coincided with those for basal root development”

✓ located verbatim in the source · abstract, characters 1506–1588 · show in text ↑
t0

“Common Bean”

✓ located verbatim in the source · title, characters 95–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Independent QTLs were identified for basal and taproot development.

Taxon
Common BeanPhaseolus vulgarist0
Organ / stage
basal and taproote0
Gene
QTLse0
Outcome
Independent QTLs were identifiede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Independent QTLs were identified for basal and taproot development”

✓ located verbatim in the source · abstract, characters 1649–1715 · show in text ↑
t0

“Common Bean”

✓ located verbatim in the source · title, characters 95–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Independent QTLs were identified for specific root length.

Taxon
Common BeanPhaseolus vulgarist0
Gene
QTLse1
Outcome
specific RLe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“and for specific RL”

✓ located verbatim in the source · abstract, characters 1717–1736 · show in text ↑
e1

“Independent QTLs were identified for basal and taproot development, and for specific RL.”

✓ located verbatim in the source · abstract, characters 1649–1737 · show in text ↑
t0

“Common Bean”

✓ located verbatim in the source · title, characters 95–106 · show in text ↑
Associationobservedoriginal resultmixedmeasured

Claim · model-written summary

Distinct QTLs for greater specific root length had positive, null and negative effects on phosphorus accumulation.

Taxon
Common BeanPhaseolus vulgarist0
Organ / stage
specific RLe0
Gene
QTLse0
Outcome
P accumulatione0
Direction
positive, null and negativee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Distinct QTLs for greater specific RL had positive, null and negative effects on P accumulation.”

✓ located verbatim in the source · abstract, characters 1738–1834 · show in text ↑
t0

“Common Bean”

✓ located verbatim in the source · title, characters 95–106 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Basal roots appear important in phosphorus acquisition.

Taxon
Common BeanPhaseolus vulgarist0
Organ / stage
basal rootse0
Outcome
P acquisitione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“basal roots appear to be important in P acquisition”

✓ located verbatim in the source · abstract, characters 1596–1647 · show in text ↑
t0

“Common Bean”

✓ located verbatim in the source · title, characters 95–106 · show in text ↑