Paper · 2012 · The Plant Cell

Cyclic Peptides Arising by Evolutionary Parallelism via Asparaginyl-Endopeptidase–Mediated Biosynthesis

Joshua S. Mylne; Lai Yue Chan; Aurelie H. Chanson; et al.

7
claims
10
verbatim quotes
154
citations
3
research areas
✓
Open access

Abstract

The cyclic miniprotein Momordica cochinchinensis Trypsin Inhibitor II (MCoTI-II) (34 amino acids) is a potent trypsin inhibitor (TI) and a favored scaffold for drug design. We have cloned the corresponding genes and determined that each precursor protein contains a tandem series of cyclic TIs terminating with the more commonly known, and potentially ancestral, acyclic TI. Expression of the precursor protein in Arabidopsis thaliana showed that production of the cyclic TIs, but not the terminal acyclic TI, depends on asparaginyl endopeptidase (AEP) for maturation. The nature of their repetitive sequences and the almost identical structures of emerging TIs suggest these cyclic peptides evolved by internal gene amplification associated with recruitment of AEP for processing between domain repeats. This is the third example of similar AEP-mediated processing of a class of cyclic peptides from unrelated precursor proteins in phylogenetically distant plant families. This suggests that production of cyclic peptides in angiosperms has evolved in parallel using AEP as a constraining evolutionary channel. We believe this is evolutionary evidence that, in addition to its known roles in proteolysis, AEP is especially suited to performing protein cyclization.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Each cloned precursor contained tandem cyclic trypsin inhibitors ending in an acyclic inhibitor.

Taxon
Momordica cochinchinensisMomordica cochinchinensise1
Gene
precursor proteine0
Outcome
tandem series of cyclic TIs terminating with the more commonly known, and potentially ancestral, acyclic TIe0
Qualifier
potentially ancestrale0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Momordica cochinchinensis
Momordica cochinchinensis · TaxonAndrew Grygus · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“We have cloned the corresponding genes and determined that each precursor protein contains a tandem series of cyclic TIs terminating with the more commonly known, and potentially ancestral, acyclic TI.”

✓ located verbatim in the source · abstract, characters 173–374 · show in text ↑
e1

“Momordica cochinchinensis Trypsin Inhibitor II”

✓ located verbatim in the source · abstract, characters 23–69 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Production of cyclic inhibitors in Arabidopsis depended on AEP.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Gene
asparaginyl endopeptidase (AEP)e0
Outcome
production of the cyclic TIse0
Qualifier
depends on asparaginyl endopeptidase (AEP) for maturatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of the precursor protein in Arabidopsis thaliana showed that production of the cyclic TIs, but not the terminal acyclic TI, depends on asparaginyl endopeptidase (AEP) for maturation.”

✓ located verbatim in the source · abstract, characters 375–568 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Production of terminal acyclic inhibitor in Arabidopsis did not depend on AEP.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Gene
asparaginyl endopeptidase (AEP)e0
Outcome
terminal acyclic TIe0
Qualifier
but not the terminal acyclic TIe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of the precursor protein in Arabidopsis thaliana showed that production of the cyclic TIs, but not the terminal acyclic TI, depends on asparaginyl endopeptidase (AEP) for maturation.”

✓ located verbatim in the source · abstract, characters 375–568 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Repetitive sequence and structural similarity suggest internal gene amplification and AEP recruitment in cyclic peptide evolution.

Taxon
Momordica cochinchinensisMomordica cochinchinensise1
Gene
AEPe0
Outcome
cyclic peptides evolved by internal gene amplificatione0
Qualifier
processing between domain repeatse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Momordica cochinchinensis
Momordica cochinchinensis · TaxonAndrew Grygus · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The nature of their repetitive sequences and the almost identical structures of emerging TIs suggest these cyclic peptides evolved by internal gene amplification associated with recruitment of AEP for processing between domain repeats.”

✓ located verbatim in the source · abstract, characters 569–804 · show in text ↑
e1

“Momordica cochinchinensis Trypsin Inhibitor II”

✓ located verbatim in the source · abstract, characters 23–69 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Similar AEP processing of unrelated precursor proteins was found in distant plant families for a third time.

Taxon
plant familiese0
Gene
AEPe0
Outcome
AEP-mediated processing of a class of cyclic peptidese0
Value
third examplee0

Verbatim

e0

“This is the third example of similar AEP-mediated processing of a class of cyclic peptides from unrelated precursor proteins in phylogenetically distant plant families.”

✓ located verbatim in the source · abstract, characters 805–973 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Cyclic peptide production in angiosperms appears to have evolved in parallel through AEP.

Taxon
angiospermsMagnoliopsidae0
Gene
AEPe0
Outcome
production of cyclic peptidese0
Qualifier
evolved in parallele0

Verbatim

e0

“This suggests that production of cyclic peptides in angiosperms has evolved in parallel using AEP as a constraining evolutionary channel.”

✓ located verbatim in the source · abstract, characters 974–1111 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Authors infer that AEP is especially suited to protein cyclization.

Taxon
angiospermsMagnoliopsidae1
Gene
AEPe0
Outcome
protein cyclizatione0
Qualifier
especially suited to performing protein cyclizatione0

Verbatim

e0

“We believe this is evolutionary evidence that, in addition to its known roles in proteolysis, AEP is especially suited to performing protein cyclization.”

✓ located verbatim in the source · abstract, characters 1112–1265 · show in text ↑
e1

“production of cyclic peptides in angiosperms”

✓ located verbatim in the source · abstract, characters 993–1037 · show in text ↑