Paper · 2008 · Annals of Botany

β-1,3 : 1,4-Glucan Synthase Activity in Rice Seedlings under Water

Tomoya Kimpara; Tsutomu Aohara; Kouichi Soga; et al.

9
claims
18
verbatim quotes
14
citations
3
research areas
✓
Open access

Abstract

BACKGROUND AND AIMS: The metabolism of beta-1,3 : 1,4-glucan regulates the mechanical properties of cell walls, and thereby changes the elongation growth of Poaceae plants. A previous study has shown that elongation growth of rice coleoptiles under water is enhanced by increased activity of beta-1,3 : 1,4-glucan hydrolases; however, the involvement of beta-1,3 : 1,4-glucan synthase activity in elongation growth under water has not yet been clarified. METHODS: The beta-1,3 : 1,4-glucan synthase activity in a microsomal fraction prepared from rice seedlings grown under water was compared with that from control seedlings grown in air. The change under water in the relative expression level of CslF6, a major isoform of the beta-1,3 : 1,4-glucan synthase genes, was examined by quantitative reverse-transcriptase PCR. KEY RESULTS: The level of beta-1,3 : 1,4-glucan synthase activity in submerged seedlings decreased to less than 40 % of that of the control seedlings and was accompanied by a significant reduction in the amount of beta-1,3 : 1,4-glucan in the cell walls. Under water, the expression of CslF6 was reduced to less than 20 % of the unsubmerged control. Bubble aeration partially restored both beta-1,3 : 1,4-glucan synthase activity and the expression of CslF6 under water, correlating with suppression of the submergence-induced elongation growth of coleoptiles. CONCLUSIONS: Submergence down-regulates the expression of the CslF6 gene, leading to a decreased level of beta-1,3 : 1,4-glucan synthase activity. Together with the increased activity of beta-1,3 : 1,4-glucan hydrolases, the decreased activity of beta-1,3 : 1,4-glucan synthase contributes to the decrease in the amount of beta-1,3 : 1,4-glucan in the cell walls under water. The suppression of beta-1,3 : 1,4-glucan synthesis under water may be mainly due to oxygen depletion.

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Claims 9

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Submergence reduced beta-1,3 : 1,4-glucan synthase activity to less than 40% of air-grown controls.

Treatment
submergede0
Outcome
beta-1,3 : 1,4-glucan synthase activitye0
Direction
decreasede0
Value
less than 40 %e0
Comparator
control seedlingse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The level of beta-1,3 : 1,4-glucan synthase activity in submerged seedlings decreased to less than 40 % of that of the control seedlings”

✓ located verbatim in the source · abstract, characters 836–972 · show in text ↑
t0

“Rice Seedlings”

✓ located verbatim in the source · title, characters 40–54 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Submergence significantly reduced cell-wall beta-1,3 : 1,4-glucan amount.

Treatment
under watert0
Outcome
amount of beta-1,3 : 1,4-glucan in the cell wallse0
Direction
reductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“a significant reduction in the amount of beta-1,3 : 1,4-glucan in the cell walls”

✓ located verbatim in the source · abstract, characters 996–1076 · show in text ↑
t0

“Rice Seedlings under Water”

✓ located verbatim in the source · title, characters 40–66 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Under water, CslF6 expression fell below 20% of the unsubmerged control.

Treatment
Under watere0
Gene
CslF6e0
Outcome
expression of CslF6e0
Direction
reducede0
Value
less than 20 %e0
Comparator
unsubmerged controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Under water, the expression of CslF6 was reduced to less than 20 % of the unsubmerged control”

✓ located verbatim in the source · abstract, characters 1078–1171 · show in text ↑
t0

“Rice Seedlings”

✓ located verbatim in the source · title, characters 40–54 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Bubble aeration partially restored glucan synthase activity under water.

Treatment
Bubble aeratione0
Outcome
beta-1,3 : 1,4-glucan synthase activitye0
Direction
partially restorede0
Qualifier
under watere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Bubble aeration partially restored both beta-1,3 : 1,4-glucan synthase activity and the expression of CslF6 under water”

✓ located verbatim in the source · abstract, characters 1173–1292 · show in text ↑
t0

“Rice Seedlings”

✓ located verbatim in the source · title, characters 40–54 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Bubble aeration partially restored CslF6 expression under water.

Treatment
Bubble aeratione0
Gene
CslF6e0
Outcome
expression of CslF6e0
Direction
partially restorede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Bubble aeration partially restored both beta-1,3 : 1,4-glucan synthase activity and the expression of CslF6 under water”

✓ located verbatim in the source · abstract, characters 1173–1292 · show in text ↑
t0

“Rice Seedlings”

✓ located verbatim in the source · title, characters 40–54 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Aeration-related recovery of synthesis and CslF6 expression correlated with suppression of submergence-induced coleoptile elongation.

Organ / stage
coleoptilese0
Outcome
submergence-induced elongation growth of coleoptilese0
Direction
suppressione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“correlating with suppression of the submergence-induced elongation growth of coleoptiles”

✓ located verbatim in the source · abstract, characters 1294–1382 · show in text ↑
t0

“Rice Seedlings”

✓ located verbatim in the source · title, characters 40–54 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors attribute the submergence decline in glucan synthase activity to downregulation of CslF6.

Treatment
Submergencee0
Gene
CslF6e0
Outcome
decreased level of beta-1,3 : 1,4-glucan synthase activitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Submergence down-regulates the expression of the CslF6 gene, leading to a decreased level of beta-1,3 : 1,4-glucan synthase activity”

✓ located verbatim in the source · abstract, characters 1397–1529 · show in text ↑
t0

“Rice Seedlings”

✓ located verbatim in the source · title, characters 40–54 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors attribute reduced cell-wall glucan to lower synthase activity together with increased hydrolase activity.

Gene
beta-1,3 : 1,4-glucan hydrolasese0
Outcome
decrease in the amount of beta-1,3 : 1,4-glucan in the cell wallse0
Qualifier
decreased activity of beta-1,3 : 1,4-glucan synthasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Together with the increased activity of beta-1,3 : 1,4-glucan hydrolases, the decreased activity of beta-1,3 : 1,4-glucan synthase contributes to the decrease in the amount of beta-1,3 : 1,4-glucan in the cell walls under water”

✓ located verbatim in the source · abstract, characters 1531–1758 · show in text ↑
t0

“Rice Seedlings”

✓ located verbatim in the source · title, characters 40–54 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The authors suggest oxygen depletion mainly explains suppressed glucan synthesis under water.

Outcome
suppression of beta-1,3 : 1,4-glucan synthesise0
Qualifier
oxygen depletione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The suppression of beta-1,3 : 1,4-glucan synthesis under water may be mainly due to oxygen depletion”

✓ located verbatim in the source · abstract, characters 1760–1860 · show in text ↑
t0

“Rice Seedlings”

✓ located verbatim in the source · title, characters 40–54 · show in text ↑

flooding · physiology: enzyme activity · Oryza sativa (rice)Positive and negative results

9 papers: 5 positive, 4 negative or no effect

3 papers in the same direction as this paper · 5 in the opposite direction

  1. positive
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  3. positive

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.