Paper · 2012 · PLANT PHYSIOLOGY

Effects of Drought on Gene Expression in Maize Reproductive and Leaf Meristem Tissue Revealed by RNA-Seq

Akshay Kakumanu; Madana M.R. Ambavaram; Curtis Klumas; et al.

11
claims
22
verbatim quotes
383
citations
3
research areas
✓
Open access · cc-by

Abstract

Drought stress affects cereals especially during the reproductive stage. The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue. More drought-responsive genes responded in the ovary compared with the leaf meristem. Gene Ontology enrichment analysis revealed a massive decrease in transcript abundance of cell division and cell cycle genes in the drought-stressed ovary only. Among Gene Ontology categories related to carbohydrate metabolism, changes in starch and Suc metabolism-related genes occurred in the ovary, consistent with a decrease in starch levels, and in Suc transporter function, with no comparable changes occurring in the leaf meristem. Abscisic acid (ABA)-related processes responded positively, but only in the ovaries. Related responses suggested the operation of low glucose sensing in drought-stressed ovaries. The data are discussed in the context of the susceptibility of maize kernel to drought stress leading to embryo abortion and the relative robustness of dividing vegetative tissue taken at the same time from the same plant subjected to the same conditions. Our working hypothesis involves signaling events associated with increased ABA levels, decreased glucose levels, disruption of ABA/sugar signaling, activation of programmed cell death/senescence through repression of a phospholipase C-mediated signaling pathway, and arrest of the cell cycle in the stressed ovary at 1 d after pollination. Increased invertase levels in the stressed leaf meristem, on the other hand, resulted in that tissue maintaining hexose levels at an "unstressed" level, and at lower ABA levels, which was correlated with successful resistance to drought stress.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

More drought-responsive genes responded in the ovary than in the leaf meristem.

Taxon
maizeZea mayse1
Organ / stage
ovarye2
Treatment
droughte1
Outcome
drought-responsive genese2
Direction
Moree2
Comparator
leaf meristeme2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e2

“More drought-responsive genes responded in the ovary compared with the leaf meristem”

✓ located verbatim in the source · abstract, characters 244–328 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Transcripts of cell division and cell cycle genes decreased massively in the drought-stressed ovary only.

Taxon
maizeZea mayse1
Organ / stage
ovarye2
Treatment
drought-stressede2
Outcome
transcript abundance of cell division and cell cycle genese2
Direction
decreasee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e2

“Gene Ontology enrichment analysis revealed a massive decrease in transcript abundance of cell division and cell cycle genes in the drought-stressed ovary only”

✓ located verbatim in the source · abstract, characters 330–488 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Changes in starch and Suc metabolism-related genes occurred in the ovary.

Taxon
maizeZea mayse1
Organ / stage
ovarye2
Outcome
changes in starch and Suc metabolism-related genese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e2

“changes in starch and Suc metabolism-related genes occurred in the ovary, consistent with a decrease in starch levels”

✓ located verbatim in the source · abstract, characters 557–674 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Starch levels decreased in the ovary.

Taxon
maizeZea mayse1
Organ / stage
ovarye2
Outcome
starch levelse2
Direction
decreasee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e2

“changes in starch and Suc metabolism-related genes occurred in the ovary, consistent with a decrease in starch levels”

✓ located verbatim in the source · abstract, characters 557–674 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Suc transporter function showed no comparable change in the leaf meristem.

Taxon
maizeZea mayse1
Organ / stage
leaf meristeme3
Outcome
Suc transporter functione3
Qualifier
no comparable changese3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e3

“and in Suc transporter function, with no comparable changes occurring in the leaf meristem”

✓ located verbatim in the source · abstract, characters 676–766 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Abscisic acid-related processes responded positively, but only in the ovaries.

Taxon
maizeZea mayse1
Organ / stage
ovariese4
Compound
Abscisic acid (ABA)e4
Outcome
(ABA)-related processese4
Direction
responded positivelye4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e4

“Abscisic acid (ABA)-related processes responded positively, but only in the ovaries”

✓ located verbatim in the source · abstract, characters 768–851 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Related responses suggest the operation of low glucose sensing in drought-stressed ovaries.

Taxon
maizeZea mayse1
Organ / stage
drought-stressed ovariese5
Compound
glucosee5
Outcome
operation of low glucose sensinge5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e5

“Related responses suggested the operation of low glucose sensing in drought-stressed ovaries”

✓ located verbatim in the source · abstract, characters 853–945 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Increased invertase levels occurred in the stressed leaf meristem.

Taxon
maizeZea mayse1
Organ / stage
leaf meristeme6
Treatment
stressede6
Outcome
invertase levelse6
Direction
Increasede6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e6

“Increased invertase levels in the stressed leaf meristem”

✓ located verbatim in the source · abstract, characters 1543–1599 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The stressed leaf meristem maintained hexose levels at an unstressed level.

Taxon
maizeZea mayse1
Outcome
hexose levelse7
Direction
maintaininge7
Qualifier
unstressede7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e7

“resulted in that tissue maintaining hexose levels at an "unstressed" level”

✓ located verbatim in the source · abstract, characters 1620–1694 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Lower ABA levels occurred in the stressed leaf meristem.

Taxon
maizeZea mayse1
Compound
ABAe2
Outcome
ABA levelse2
Direction
lowere2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e2

“and at lower ABA levels, which was correlated with successful resistance to drought stress”

✓ located verbatim in the source · abstract, characters 1696–1786 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Lower ABA levels were correlated with successful resistance to drought stress.

Taxon
maizeZea mayse1
Treatment
drought stresse2
Outcome
successful resistance to drought stresse2

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The maize (Zea mays) drought transcriptome was studied using RNA-Seq analysis to compare drought-treated and well-watered fertilized ovary and basal leaf meristem tissue”

✓ located verbatim in the source · abstract, characters 73–242 · show in text ↑
e2

“and at lower ABA levels, which was correlated with successful resistance to drought stress”

✓ located verbatim in the source · abstract, characters 1696–1786 · show in text ↑