Paper · 2016 · Molecular Plant Pathology

A transcription activator‐like effector from Xanthomonas oryzae pv. oryzicola elicits dose‐dependent resistance in rice

Aaron W. Hummel; Katherine E. Wilkins; Li Wang; et al.

8
claims
8
verbatim quotes
30
citations
2
research areas
✓
Open access

Abstract

Xanthomonas spp. reduce crop yields and quality worldwide. During infection of their plant hosts, many strains secrete transcription activator-like (TAL) effectors, which enter the host cell nucleus and activate specific corresponding host genes at effector binding elements (EBEs) in the promoter. TAL effectors may contribute to disease by activating the expression of susceptibility genes or trigger resistance associated with the hypersensitive reaction (HR) by activating an executor resistance (R) gene. The rice bacterial leaf streak pathogen X. oryzae pv. oryzicola (Xoc) is known to suppress host resistance, and no host R gene has been identified against it, despite considerable effort. To further investigate Xoc suppression of host resistance, we conducted a screen of effectors from BLS256 and identified Tal2a as an HR elicitor in rice when delivered heterologously by a strain of the closely related rice bacterial blight pathogen X. oryzae pv. oryzae (Xoo) or by the soybean pathogen X. axonopodis pv. glycines. The HR required the Tal2a activation domain, suggesting an executor R gene. Tal2a activity was differentially distributed among geographically diverse Xoc isolates, being largely conserved among Asian isolates. We identified four genes induced by Tal2a in next-generation RNA sequencing experiments and confirmed them using quantitative real-time reverse transcription-polymerase chain reaction (qPCR). However, neither individual nor collective activation of these genes by designer TAL effectors resulted in HR. A tal2a knockout mutant of BLS256 showed virulence comparable with the wild-type, but plasmid-based overexpression of tal2a at different levels in the wild-type reduced virulence in a directly corresponding way. Overall, the results reveal that host resistance suppression by Xoc plays a critical role in pathogenesis. Further, the dose-dependent avirulence activity of Tal2a and the apparent lack of a single canonical target that accounts for HR point to a novel, activation domain-dependent mode of action, which might involve, for example, a non-coding gene or a specific pattern of activation across multiple targets.

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Claims 8

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Tal2a elicited rice hypersensitive response when delivered by two heterologous bacterial strains.

Interactor
X. oryzae pv. oryzaeXanthomonas oryzae pv. oryzaee0pathogen
Gene
Tal2ae0
Outcome
HRe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae · InteractorDonald Groth, Louisiana State University AgCenter, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“identified Tal2a as an HR elicitor in rice when delivered heterologously by a strain of the closely related rice bacterial blight pathogen X. oryzae pv. oryzae (Xoo) or by the soybean pathogen X. axonopodis pv. glycines.”

✓ located verbatim in the source · abstract, characters 808–1028 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Tal2a triggered rice hypersensitive response when delivered by X. axonopodis pv. glycines.

Interactor
X. axonopodis pv. glycinesXanthomonas citri pv. glycinese0pathogen
Gene
Tal2ae0
Outcome
HRe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“identified Tal2a as an HR elicitor in rice when delivered heterologously by a strain of the closely related rice bacterial blight pathogen X. oryzae pv. oryzae (Xoo) or by the soybean pathogen X. axonopodis pv. glycines.”

✓ located verbatim in the source · abstract, characters 808–1028 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

The Tal2a activation domain was required for hypersensitive response.

Gene
Tal2ae0
Outcome
HRe0
Qualifier
activation domaine0

Not reportedTaxon

Verbatim

e0

“The HR required the Tal2a activation domain”

✓ located verbatim in the source · abstract, characters 1029–1072 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Tal2a activity differed among Xoc isolates and was largely conserved in Asian isolates.

Gene
Tal2ae0
Outcome
Tal2a activitye0
Setting
Asiane0

Not reportedTaxon

Verbatim

e0

“Tal2a activity was differentially distributed among geographically diverse Xoc isolates, being largely conserved among Asian isolates.”

✓ located verbatim in the source · abstract, characters 1105–1239 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Four genes were induced by Tal2a and confirmed by qPCR.

Gene
Tal2ae0
Outcome
genes inducede0
Value
foure0

Not reportedTaxon

Verbatim

e0

“We identified four genes induced by Tal2a in next-generation RNA sequencing experiments and confirmed them using quantitative real-time reverse transcription-polymerase chain reaction (qPCR).”

✓ located verbatim in the source · abstract, characters 1240–1431 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Designer TAL effector activation of the four genes did not cause HR.

Treatment
designer TAL effectorse0
Outcome
HRe0
Direction
neithere0

Not reportedTaxonComparator

Verbatim

e0

“neither individual nor collective activation of these genes by designer TAL effectors resulted in HR.”

✓ located verbatim in the source · abstract, characters 1441–1542 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

The tal2a knockout had comparable virulence to wild type.

Material
tal2a knockout mutant of BLS256e0
Outcome
virulencee0
Direction
comparablee0
Comparator
wild-typee0

Not reportedTaxon

Verbatim

e0

“A tal2a knockout mutant of BLS256 showed virulence comparable with the wild-type”

✓ located verbatim in the source · abstract, characters 1543–1623 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Increasing tal2a overexpression reduced virulence correspondingly.

Treatment
plasmid-based overexpression of tal2ae0
Gene
tal2ae0
Outcome
virulencee0
Direction
reducede0

Not reportedTaxon

Verbatim

e0

“plasmid-based overexpression of tal2a at different levels in the wild-type reduced virulence in a directly corresponding way.”

✓ located verbatim in the source · abstract, characters 1629–1754 · show in text ↑

pathogen product · disease · Oryza sativa (rice)Positive and negative results

23 papers: 15 positive, 8 negative or no effect

7 papers in the same direction as this paper · 15 in the opposite direction

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.