Paper · 2012 · Zhongguo nongye Kexue

Cloning,Expression and Promoter Analysis of AP1 Homologous Gene from Strawberry (Fragaria×ananassa)

Hongyan Dai

9
claims
9
verbatim quotes
2
citations
2
research areas
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Not open access

Abstract

【Objective】The aim of this study was to isolate the AP1 homologous gene from strawberry(Fragaria×ananassa),analyze its expression level in different tissues,organs and at different growth stages of flowers and elucidate the role of it in the floral development progress of strawberry【.Method】The fragment of an AP1 homologous gene was amplified from young leaves and flower buds of strawberry with the degenerate primers designed according to the conserved sequences of AP1 homologous genes in the other species.The full-length cDNA sequence of this gene was obtained with RACE technique.Real time RT-PCR was used to analyze the expression patterns of this gene in different tissues,organs and at different growth stages of flowering of strawberry.A promoter sequence was isolated with chromosome walking methods.【Result】 An AP1 homologous gene in strawberry was cloned from cultivar ‘Huaji’ and it was designated as FaAP1.The CDS length of FaAP1 is 735 bp and encodes a predicted protein of 245 amino acid residues.Its amino acid sequence shows a highest homology with the AP1-1 of Rosa,up to 92%,and also has a homology of 64.00% when compared with the AtAP1 of Arabidopsis thaliana.FaAP1 is a MIKC type MADS-box gene for its amino acid sequence contained the typical domains of MADS-box,I-region,K-box and C-terminal.The results of real time RT-PCR showed that the expression patterns of FaAP1 changed in different tissues,organs and flowers of different growth stages.In addition to the TATA/CAAT-box,its promoter also contained some specific regulatory elements【.Conclusion】FaAP1,an AP1 homologous gene in strawberry,was isolated and it may play an important role in the progress of flowering in strawberry.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

An AP1 homologous gene, FaAP1, was cloned from strawberry cultivar Huaji.

Taxon
strawberryFragaria ×ananassae0
Material
‘Huaji’e0
Gene
FaAP1e0
Outcome
was clonede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“An AP1 homologous gene in strawberry was cloned from cultivar ‘Huaji’ and it was designated as FaAP1”

✓ located verbatim in the source · abstract, characters 822–922 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The FaAP1 coding sequence is 735 bp.

Gene
FaAP1e0
Outcome
CDS lengthe0
Value
735 bpe0

Not reportedTaxon

Verbatim

e0

“The CDS length of FaAP1 is 735 bp”

✓ located verbatim in the source · abstract, characters 923–956 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

FaAP1 encodes a predicted 245-amino-acid protein.

Outcome
predicted proteine0
Value
245 amino acid residuese0

Not reportedTaxon

Verbatim

e0

“encodes a predicted protein of 245 amino acid residues”

✓ located verbatim in the source · abstract, characters 961–1015 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

FaAP1 had 92% amino-acid homology with Rosa AP1-1.

Gene
AP1-1 of Rosae0
Outcome
homologye0
Value
92%e0

Not reportedTaxon

Verbatim

e0

“Its amino acid sequence shows a highest homology with the AP1-1 of Rosa,up to 92%”

✓ located verbatim in the source · abstract, characters 1016–1097 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

FaAP1 had 64.00% homology with Arabidopsis AtAP1.

Gene
AtAP1 of Arabidopsis thalianae0
Outcome
homologye0
Value
64.00%e0

Not reportedTaxon

Verbatim

e0

“homology of 64.00% when compared with the AtAP1 of Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 1113–1184 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

FaAP1 was classified as a MIKC type MADS-box gene with characteristic domains.

Gene
FaAP1e0
Outcome
MIKC type MADS-box genee0

Not reportedTaxon

Verbatim

e0

“FaAP1 is a MIKC type MADS-box gene for its amino acid sequence contained the typical domains of MADS-box,I-region,K-box and C-terminal”

✓ located verbatim in the source · abstract, characters 1185–1319 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

FaAP1 expression varied among tissues, organs and flower growth stages.

Organ / stage
flowers of different growth stagese0
Gene
FaAP1e0
Outcome
expression patternse0

Not reportedTaxon

Verbatim

e0

“expression patterns of FaAP1 changed in different tissues,organs and flowers of different growth stages”

✓ located verbatim in the source · abstract, characters 1368–1471 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The FaAP1 promoter contained TATA/CAAT-box and other specific regulatory elements.

Outcome
promoter also contained some specific regulatory elementse0

Not reportedTaxon

Verbatim

e0

“In addition to the TATA/CAAT-box,its promoter also contained some specific regulatory elements”

✓ located verbatim in the source · abstract, characters 1472–1566 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

FaAP1 may play an important role in strawberry flowering.

Taxon
strawberryFragaria ×ananassae0
Gene
FaAP1e0
Outcome
progress of floweringe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“FaAP1,an AP1 homologous gene in strawberry,was isolated and it may play an important role in the progress of flowering in strawberry”

✓ located verbatim in the source · abstract, characters 1579–1711 · show in text ↑