Paper · 2005 · Korean Journal of Microbiology and Biotechnology

Characterization of Bacteria Isolated from Rotted Onions (Allium cepa)

Chan-Jung Lee; Si-Kyu Lim; Byung-Chun Kim; et al.

14
claims
20
verbatim quotes
1
citations
2
research areas
—
Not open access

Abstract

One hundred thirty nine bacteria were isolated from rotten onions collected from main producing districts, Chang-Nyung, Eui-Ryung, and Ham-Yang in Korea. The (25 strains) of bacterial isolates have carboxymethylcellulase (CMCase) activity and the (74 strains) have polygalacturonase (PGase) activity. Thirty one among randomly selected 45 strains of PGase producing bacteria have pathogenicity to onions. The isolates were classified into Pseudomonas sp. (18 strains), Bacillus sp. (11 strains), Yers-inia sp. (7 strains), and others (9 strains) on the basis of FAMEs patterns. Eighteen strains of Pseudomonas sp. were mainly divided into three cluster in the dendrogram and only the two clusters of them showed pathogenicity to onions. CMCase and PGase activities of Pseudomonas sp. weaker than those of Bacillus sp.. However, the pathogenicity of pseudomonas sp. to soften onions was stronger than that of Bacillus sp. Inoculation of cfu of Pseudomonas sp. gives rise to softening of onions. Pseudomonas sp. was identified as Pseudomonas gladioli by biochemical and physiological characteristics. P. gladioli is the first reported bacterium as a pathogen of onion in Korea. In low temperature, P. gladioli showed better growth and higher PGase activity than those of Bacillus sp. identified as Bacillus subtilis. And pH 9.0 is optimal pH for PGase activity of B. subtilis while that of P. gladioli is pH which is the acidity of onions. Taken together, P. gladioli may be a main pathogene of onion rot during the cold storage condition.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 14

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

31 of 45 randomly selected PGase-producing strains were pathogenic to onions

Taxon
onionsAllium cepae1
Interactor
PGase producing bacteriae1pathogen
Outcome
pathogenicity to onionse1
Value
Thirty onee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Thirty one among randomly selected 45 strains of PGase producing bacteria have pathogenicity to onions”

✓ located verbatim in the source · abstract, characters 301–403 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Only two of three Pseudomonas sp. clusters showed pathogenicity to onions

Taxon
onionsAllium cepae2
Interactor
Pseudomonas sp.Pseudomonase2pathogen
Outcome
pathogenicity to onionse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas
Pseudomonas · Interactor · picture of the genus (one of its species)CDC · Public domain · Wikimedia Commons ↗

Verbatim

e2

“Eighteen strains of Pseudomonas sp. were mainly divided into three cluster in the dendrogram and only the two clusters of them showed pathogenicity to onions”

✓ located verbatim in the source · abstract, characters 578–735 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

CMCase and PGase activities of Pseudomonas sp. were weaker than those of Bacillus sp.

Taxon
onionsAllium cepae0
Interactor
Pseudomonas sp.Pseudomonase3pathogen
Outcome
CMCase and PGase activitiese3
Direction
weakere3
Comparator
Bacillus spe3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas
Pseudomonas · Interactor · picture of the genus (one of its species)CDC · Public domain · Wikimedia Commons ↗

Verbatim

e0

“One hundred thirty nine bacteria were isolated from rotten onions collected from main producing districts”

✓ located verbatim in the source · abstract, characters 0–105 · show in text ↑
e3

“CMCase and PGase activities of Pseudomonas sp. weaker than those of Bacillus sp”

✓ located verbatim in the source · abstract, characters 737–816 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The 25 isolates had carboxymethylcellulase (CMCase) activity

Taxon
onionsAllium cepae0
Outcome
carboxymethylcellulase (CMCase) activitye4
Value
25 strainse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“One hundred thirty nine bacteria were isolated from rotten onions collected from main producing districts”

✓ located verbatim in the source · abstract, characters 0–105 · show in text ↑
e4

“The (25 strains) of bacterial isolates have carboxymethylcellulase (CMCase) activity”

✓ located verbatim in the source · abstract, characters 154–238 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

74 isolates had polygalacturonase (PGase) activity

Taxon
onionsAllium cepae0
Outcome
polygalacturonase (PGase) activitye5
Value
74 strainse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“One hundred thirty nine bacteria were isolated from rotten onions collected from main producing districts”

✓ located verbatim in the source · abstract, characters 0–105 · show in text ↑
e5

“the (74 strains) have polygalacturonase (PGase) activity”

✓ located verbatim in the source · abstract, characters 243–299 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Inoculation with Pseudomonas sp. caused softening of onions

Taxon
onionsAllium cepae6
Treatment
Inoculation of cfu of Pseudomonas sp.e6
Interactor
Pseudomonas sp.Pseudomonase6pathogen
Outcome
softening of onionse6

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas
Pseudomonas · Interactor · picture of the genus (one of its species)CDC · Public domain · Wikimedia Commons ↗

Verbatim

e6

“Inoculation of cfu of Pseudomonas sp. gives rise to softening of onions”

✓ located verbatim in the source · abstract, characters 921–992 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Pathogenicity of Pseudomonas sp. to soften onions was stronger than that of Bacillus sp.

Taxon
onionsAllium cepae7
Interactor
pseudomonas sp.e7pathogen
Outcome
pathogenicitye7
Direction
strongere7
Comparator
Bacillus spe7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e7

“the pathogenicity of pseudomonas sp. to soften onions was stronger than that of Bacillus sp”

✓ located verbatim in the source · abstract, characters 828–919 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pseudomonas sp. was identified as Pseudomonas gladioli

Taxon
onionsAllium cepae0
Interactor
Pseudomonas gladioliBurkholderia gladiolie5pathogen
Outcome
Pseudomonas sp. was identified as Pseudomonas gladiolie5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Burkholderia gladioli
Burkholderia gladioli · Interactor英语維基百科 的 Melww · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“One hundred thirty nine bacteria were isolated from rotten onions collected from main producing districts”

✓ located verbatim in the source · abstract, characters 0–105 · show in text ↑
e5

“Pseudomonas sp. was identified as Pseudomonas gladioli by biochemical and physiological characteristics”

✓ located verbatim in the source · abstract, characters 994–1097 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Pseudomonas gladioli is the first reported bacterial pathogen of onion in Korea

Taxon
onionAllium cepae6
Interactor
P. gladioliBurkholderia gladiolie6pathogen
Outcome
first reported bacterium as a pathogen of onione6
Setting
in Koreae6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Burkholderia gladioli
Burkholderia gladioli · Interactor英语維基百科 的 Melww · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e6

“P. gladioli is the first reported bacterium as a pathogen of onion in Korea”

✓ located verbatim in the source · abstract, characters 1099–1174 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

At low temperature P. gladioli grew better than Bacillus sp.

Taxon
onionsAllium cepae0
Treatment
low temperaturee7
Interactor
P. gladioliBurkholderia gladiolie7pathogen
Outcome
growthe7
Direction
bettere7
Comparator
Bacillus spe7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Burkholderia gladioli
Burkholderia gladioli · Interactor英语維基百科 的 Melww · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“One hundred thirty nine bacteria were isolated from rotten onions collected from main producing districts”

✓ located verbatim in the source · abstract, characters 0–105 · show in text ↑
e7

“In low temperature, P. gladioli showed better growth and higher PGase activity than those of Bacillus sp”

✓ located verbatim in the source · abstract, characters 1176–1280 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

At low temperature P. gladioli had higher PGase activity than Bacillus sp.

Taxon
onionsAllium cepae0
Treatment
low temperaturee7
Interactor
P. gladioliBurkholderia gladiolie7pathogen
Outcome
PGase activitye7
Direction
highere7
Comparator
Bacillus spe7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Burkholderia gladioli
Burkholderia gladioli · Interactor英语維基百科 的 Melww · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“One hundred thirty nine bacteria were isolated from rotten onions collected from main producing districts”

✓ located verbatim in the source · abstract, characters 0–105 · show in text ↑
e7

“In low temperature, P. gladioli showed better growth and higher PGase activity than those of Bacillus sp”

✓ located verbatim in the source · abstract, characters 1176–1280 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The optimal pH for PGase activity of Bacillus subtilis is pH 9.0

Taxon
onionsAllium cepae6
Interactor
B. subtilisBacillus subtilise6other
Outcome
optimal pH for PGase activitye6
Value
pH 9.0e6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Bacillus subtilis
Bacillus subtilis · InteractorY tambe (original uploader) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e6

“And pH 9.0 is optimal pH for PGase activity of B. subtilis while that of P. gladioli is pH which is the acidity of onions”

✓ located verbatim in the source · abstract, characters 1315–1436 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The optimal pH for PGase activity of P. gladioli matches the acidity of onions

Taxon
onionsAllium cepae6
Interactor
P. gladioliBurkholderia gladiolie6pathogen
Outcome
optimal pH for PGase activitye6
Value
pH which is the acidity of onionse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Burkholderia gladioli
Burkholderia gladioli · Interactor英语維基百科 的 Melww · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e6

“And pH 9.0 is optimal pH for PGase activity of B. subtilis while that of P. gladioli is pH which is the acidity of onions”

✓ located verbatim in the source · abstract, characters 1315–1436 · show in text ↑
Associationhypothesisoriginal resultnegativemeasured

Claim · model-written summary

P. gladioli may be a main pathogen of onion rot during cold storage

Taxon
onionAllium cepae7
Interactor
P. gladioliBurkholderia gladiolie7pathogen
Outcome
onion rote7
Setting
cold storage conditione7

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Burkholderia gladioli
Burkholderia gladioli · Interactor英语維基百科 的 Melww · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e7

“Taken together, P. gladioli may be a main pathogene of onion rot during the cold storage condition”

✓ located verbatim in the source · abstract, characters 1438–1536 · show in text ↑

inoculation · quality: postharvest · Allium cepa (onion)Positive and negative results

12 papers: 7 positive, 5 negative or no effect

4 papers in the same direction as this paper · 7 in the opposite direction

  1. positive
  2. positive
  3. positive

8 papers more in this group

See all 12 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.