Abstract
A cDNA encoding a class III chitinase (Oschib1) was isolated from a cDNA library constructed from rice leaves infected with the blast fungus Magnaporthe grisea. The cDNA contains an open reading frame of 861 nucleotides encoding 286 amino acid residues with a pI of 5.06. The deduced amino acid sequence of Oschibl has a high level of similarity with class IIIb chitinases of Gladiolus gandavensis (46%) and Tulipa bakeri (49%). A high level of Oschibl mRNA was detected after inoculation with M. grisea or Xanthomonas oryzae pv. oryzae. Expression of Oschib1 was induced more rapidly when an avirulent strain of M. grisea was inoculated (incompatible interaction) than when a virulent strain was used (compatible interaction). Expression of Oschibl was also induced by treatment of signaling molecules such as salicylic acid, ethylene, and methyl jasmonic acid, and by treatment with H2O2 or CuSO4. The induction patterns of Oschibl expression suggest that Oschib1 may be involved in defense response against pathogen infections and may be classified as a member of pathogenesis-related protein 8 in rice.
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Claims 14
Claim · model-written summary
A cDNA encoding class III chitinase Oschib1 was isolated from infected rice leaves.
- Taxon
- Rice
Oryza sativat0 - Organ / stage
- rice leavese0
- Interactor
- Magnaporthe grisea
Pyricularia griseae0pathogen - Gene
- Oschib1e0
- Outcome
- A cDNA encoding a class III chitinase (Oschib1) was isolatede0
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“A cDNA encoding a class III chitinase (Oschib1) was isolated from a cDNA library constructed from rice leaves infected with the blast fungus Magnaporthe grisea.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
The cDNA has an 861 nucleotide open reading frame encoding 286 amino acid residues.
- Taxon
- RiceOryza sativat0
- Outcome
- open reading framee0
- Value
- 861 nucleotidese0
- Qualifier
- 286 amino acid residues with a pI of 5.06e0
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“The cDNA contains an open reading frame of 861 nucleotides encoding 286 amino acid residues with a pI of 5.06.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
Oschibl sequence similarity to Gladiolus gandavensis class IIIb chitinase was 46%.
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“The deduced amino acid sequence of Oschibl has a high level of similarity with class IIIb chitinases of Gladiolus gandavensis (46%) and Tulipa bakeri (49%).”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
Oschibl sequence similarity to Tulipa bakeri class IIIb chitinase was 49%.
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“The deduced amino acid sequence of Oschibl has a high level of similarity with class IIIb chitinases of Gladiolus gandavensis (46%) and Tulipa bakeri (49%).”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
Oschibl mRNA reached a high level after inoculation with M. grisea.
- Taxon
- RiceOryza sativat0
- Treatment
- inoculation with M. griseae0
- Interactor
- M. griseaPyricularia griseae0pathogen
- Gene
- Oschible0
- Outcome
- Oschibl mRNAe0
- Direction
- high levele0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“A high level of Oschibl mRNA was detected after inoculation with M. grisea or Xanthomonas oryzae pv. oryzae.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
Oschibl mRNA reached a high level after inoculation with Xanthomonas oryzae pv. oryzae.
- Taxon
- RiceOryza sativat0
- Treatment
- Xanthomonas oryzae pv. oryzaee0
- Interactor
- Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzaee0pathogen - Gene
- Oschible0
- Outcome
- Oschibl mRNAe0
- Direction
- high levele0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“A high level of Oschibl mRNA was detected after inoculation with M. grisea or Xanthomonas oryzae pv. oryzae.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
An avirulent M. grisea strain induced Oschib1 expression more rapidly than a virulent strain.
- Taxon
- RiceOryza sativat0
- Treatment
- avirulent strain of M. griseae0
- Interactor
- M. griseaPyricularia griseae0pathogen
- Gene
- Oschib1e0
- Outcome
- Expression of Oschib1e0
- Direction
- more rapidlye0
- Comparator
- virulent straine0
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“Expression of Oschib1 was induced more rapidly when an avirulent strain of M. grisea was inoculated (incompatible interaction) than when a virulent strain was used (compatible interaction).”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
salicylic acid induced Oschibl expression.
- Taxon
- RiceOryza sativat0
- Treatment
- salicylic acide0
- Gene
- Oschible0
- Outcome
- Expression of Oschible0
- Direction
- inducede0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“Expression of Oschibl was also induced by treatment of signaling molecules such as salicylic acid, ethylene, and methyl jasmonic acid, and by treatment with H2O2 or CuSO4.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
ethylene induced Oschibl expression.
- Taxon
- RiceOryza sativat0
- Treatment
- ethylenee0
- Gene
- Oschible0
- Outcome
- Expression of Oschible0
- Direction
- inducede0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“Expression of Oschibl was also induced by treatment of signaling molecules such as salicylic acid, ethylene, and methyl jasmonic acid, and by treatment with H2O2 or CuSO4.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
methyl jasmonic acid induced Oschibl expression.
- Taxon
- RiceOryza sativat0
- Treatment
- methyl jasmonic acide0
- Gene
- Oschible0
- Outcome
- Expression of Oschible0
- Direction
- inducede0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“Expression of Oschibl was also induced by treatment of signaling molecules such as salicylic acid, ethylene, and methyl jasmonic acid, and by treatment with H2O2 or CuSO4.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
H2O2 induced Oschibl expression.
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“Expression of Oschibl was also induced by treatment of signaling molecules such as salicylic acid, ethylene, and methyl jasmonic acid, and by treatment with H2O2 or CuSO4.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
CuSO4 induced Oschibl expression.
- Taxon
- RiceOryza sativat0
- Treatment
- CuSO4e0
- Gene
- Oschible0
- Outcome
- Expression of Oschible0
- Direction
- inducede0
Not reportedComparator
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“Expression of Oschibl was also induced by treatment of signaling molecules such as salicylic acid, ethylene, and methyl jasmonic acid, and by treatment with H2O2 or CuSO4.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
The authors suggest Oschib1 may participate in defense against pathogen infections.
- Taxon
- RiceOryza sativat0
- Gene
- Oschib1e0
- Outcome
- defense response against pathogen infectionse0
- Qualifier
- may be involvede0
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“The induction patterns of Oschibl expression suggest that Oschib1 may be involved in defense response against pathogen infections and may be classified as a member of pathogenesis-related protein 8 in rice.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
Claim · model-written summary
The authors suggest Oschib1 may be classified as pathogenesis-related protein 8.
- Taxon
- RiceOryza sativat0
- Gene
- Oschib1e0
- Outcome
- may be classified as a member of pathogenesis-related protein 8e0
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“The induction patterns of Oschibl expression suggest that Oschib1 may be involved in defense response against pathogen infections and may be classified as a member of pathogenesis-related protein 8 in rice.”
t0“Molecular Characterization of a Pathogenesis-related Protein 8 Gene Encoding a Class III Chitinase in Rice”
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See all 10 papers →8 of 9 groups shown: named compounds and organisms first, then groups whose results differ (checked claim by claim), then those with positive and negative results, then the smaller groups.
Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.