Paper · 2017 · International Journal of Molecular Sciences

Transcriptomic Analysis of Gibberellin- and Paclobutrazol-Treated Rice Seedlings under Submergence

Jing Xiang; Hui Wu; Yuping Zhang; et al.

6
claims
6
verbatim quotes
35
citations
2
research areas
✓
Open access · cc-by

Abstract

Submergence stress is a limiting factor for rice growing in rainfed lowland areas of the world. It is known that the phytohormone gibberellin (GA) has negative effects on submergence tolerance in rice, while its inhibitor paclobutrazol (PB) does the opposite. However, the physiological and molecular basis underlying the GA- and PB-regulated submergence response remains largely unknown. In this study, we reveal that PB could significantly enhance rice seedling survival by retaining a higher level of chlorophyll content and alcohol dehydrogenase activity, and decelerating the consumption of non-structure carbohydrate when compared with the control and GA-treated samples. Further transcriptomic analysis identified 3936 differentially expressed genes (DEGs) among the GA- and PB-treated samples and control, which are extensively involved in the submergence and other abiotic stress responses, phytohormone biosynthesis and signaling, photosynthesis, and nutrient metabolism. The results suggested that PB enhances rice survival under submergence through maintaining the photosynthesis capacity and reducing nutrient metabolism. Taken together, the current study provided new insight into the mechanism of phytohormone-regulated submergence response in rice.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Paclobutrazol significantly enhanced submerged rice seedling survival compared with control and gibberellin treatment.

Treatment
PBe0
Outcome
rice seedling survivale0
Direction
enhancee0
Comparator
the control and GA-treated samplese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“PB could significantly enhance rice seedling survival by retaining a higher level of chlorophyll content and alcohol dehydrogenase activity, and decelerating the consumption of non-structure carbohydrate when compared with the control and GA-treated samples.”

✓ located verbatim in the source · abstract, characters 419–677 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Paclobutrazol retained higher chlorophyll content.

Treatment
PBe0
Outcome
chlorophyll contente0
Direction
highere0
Comparator
the control and GA-treated samplese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“PB could significantly enhance rice seedling survival by retaining a higher level of chlorophyll content and alcohol dehydrogenase activity, and decelerating the consumption of non-structure carbohydrate when compared with the control and GA-treated samples.”

✓ located verbatim in the source · abstract, characters 419–677 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Paclobutrazol retained higher alcohol dehydrogenase activity.

Treatment
PBe0
Gene
alcohol dehydrogenasee0
Outcome
alcohol dehydrogenase activitye0
Direction
highere0
Comparator
the control and GA-treated samplese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“PB could significantly enhance rice seedling survival by retaining a higher level of chlorophyll content and alcohol dehydrogenase activity, and decelerating the consumption of non-structure carbohydrate when compared with the control and GA-treated samples.”

✓ located verbatim in the source · abstract, characters 419–677 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Paclobutrazol slowed non-structural carbohydrate consumption.

Treatment
PBe0
Outcome
consumption of non-structure carbohydratee0
Direction
deceleratinge0
Comparator
the control and GA-treated samplese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“PB could significantly enhance rice seedling survival by retaining a higher level of chlorophyll content and alcohol dehydrogenase activity, and decelerating the consumption of non-structure carbohydrate when compared with the control and GA-treated samples.”

✓ located verbatim in the source · abstract, characters 419–677 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Transcriptomic analysis identified 3936 differentially expressed genes among GA, PB and control rice seedlings.

Outcome
differentially expressed genes (DEGs)e0
Value
3936e0

Not reportedTaxon

Verbatim

e0

“identified 3936 differentially expressed genes (DEGs) among the GA- and PB-treated samples and control”

✓ located verbatim in the source · abstract, characters 710–812 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Paclobutrazol was proposed to enhance submerged rice survival by maintaining photosynthesis and reducing nutrient metabolism.

Treatment
PBe0
Outcome
rice survival under submergencee0
Qualifier
maintaining the photosynthesis capacity and reducing nutrient metabolisme0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“PB enhances rice survival under submergence through maintaining the photosynthesis capacity and reducing nutrient metabolism.”

✓ located verbatim in the source · abstract, characters 1009–1134 · show in text ↑

paclobutrazol · physiology: pigments · Oryza sativa (rice)Results differ

9 papers: 7 positive, 2 negative or no effect

6 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

5 papers more in this group

See all 9 papers →

paclobutrazol · growth · Oryza sativa (rice)Results differ

29 papers: 24 positive, 5 negative or no effect

23 papers in the same direction as this paper · 5 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

25 papers more in this group

See all 29 papers →

paclobutrazol · pest · Oryza sativa (rice)Results agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.