Paper · 2018 · Scientific Reports

Characterization of a ripening-related transcription factor FcNAC1 from Fragaria chiloensis fruit

C. Carrasco-Orellana; Y. Stappung; A. Mendez-Yañez; et al.

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claims
12
verbatim quotes
66
citations
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research areas
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Open access · cc-by

Abstract

Fragaria chiloensis is a strawberry endemic from Chile with attractive white-pink fruit, pleasant aroma and taste. However, this fruit has a limited post-harvest period due to fast softening. Several transcription factors (TFs) are involved in the regulation of fruit ripening, and members of the NAC family have been implicated in cell wall remodeling. FcNAC1 was isolated from F. chiloensis fruit, coding a protein of 332 amino acid residues and displaying a characteristic NAC domain at the N terminus. FcNAC1 protein showed nuclear localization. An increase in transcript level was observed during ripening. A sequence of 1488 bp of FcNAC1 promoter was obtained. In silico analysis identified cis elements able to respond to some hormones and Secondary wall NAC binding elements (SNBE), and responding to auxin and ABA. A structural model of FcNAC1 provided evidence for interaction with DNA sequences containing SNBE, while a dual luciferase assay confirmed the transcriptional activation by FcNAC1 of the promoter of FcPL, a gene involved in cell wall remodeling in F. chiloensis fruit. The results suggest the participation of FcNAC1 during ripening development of strawberry fruit, by regulating pectin metabolism during softening.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

FcNAC1 protein localizes to the nucleus.

Taxon
Fragaria chiloensisFragaria chiloensist0
Gene
FcNAC1t0
Outcome
nuclear localizatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria chiloensis
Fragaria chiloensis · TaxonWill Elder / National Park Service · Public domain · Wikimedia Commons ↗

Verbatim

t0

“FcNAC1 from Fragaria chiloensis fruit”

✓ located verbatim in the source · title, characters 60–97 · show in text ↑
e1

“FcNAC1 protein showed nuclear localization”

✓ located verbatim in the source · abstract, characters 506–548 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

FcNAC1 transcript level increased during fruit ripening.

Taxon
Fragaria chiloensisFragaria chiloensist0
Organ / stage
fruitt0
Gene
FcNAC1t0
Outcome
transcript levele2
Direction
increasee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria chiloensis
Fragaria chiloensis · TaxonWill Elder / National Park Service · Public domain · Wikimedia Commons ↗

Verbatim

t0

“FcNAC1 from Fragaria chiloensis fruit”

✓ located verbatim in the source · title, characters 60–97 · show in text ↑
e2

“An increase in transcript level was observed during ripening”

✓ located verbatim in the source · abstract, characters 550–610 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

In silico analysis identified promoter cis elements responding to hormones, including auxin and ABA.

Taxon
Fragaria chiloensisFragaria chiloensist0
Gene
FcNAC1t0
Outcome
cis elementse3
Qualifier
responding to auxin and ABAe3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria chiloensis
Fragaria chiloensis · TaxonWill Elder / National Park Service · Public domain · Wikimedia Commons ↗

Verbatim

t0

“FcNAC1 from Fragaria chiloensis fruit”

✓ located verbatim in the source · title, characters 60–97 · show in text ↑
e3

“In silico analysis identified cis elements able to respond to some hormones and Secondary wall NAC binding elements (SNBE), and responding to auxin and ABA”

✓ located verbatim in the source · abstract, characters 667–822 · show in text ↑
Observationauthor interpretationoriginal resultsimulated

Claim · model-written summary

A structural model of FcNAC1 suggests interaction with DNA sequences containing SNBE.

Taxon
Fragaria chiloensisFragaria chiloensist0
Gene
FcNAC1t0
Outcome
interaction with DNA sequences containing SNBEe4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria chiloensis
Fragaria chiloensis · TaxonWill Elder / National Park Service · Public domain · Wikimedia Commons ↗

Verbatim

t0

“FcNAC1 from Fragaria chiloensis fruit”

✓ located verbatim in the source · title, characters 60–97 · show in text ↑
e4

“A structural model of FcNAC1 provided evidence for interaction with DNA sequences containing SNBE”

✓ located verbatim in the source · abstract, characters 824–921 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

FcNAC1 transcriptionally activates the FcPL promoter in a dual luciferase assay.

Taxon
Fragaria chiloensisFragaria chiloensist0
Gene
FcPLe5
Outcome
transcriptional activatione5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria chiloensis
Fragaria chiloensis · TaxonWill Elder / National Park Service · Public domain · Wikimedia Commons ↗

Verbatim

t0

“FcNAC1 from Fragaria chiloensis fruit”

✓ located verbatim in the source · title, characters 60–97 · show in text ↑
e5

“dual luciferase assay confirmed the transcriptional activation by FcNAC1 of the promoter of FcPL”

✓ located verbatim in the source · abstract, characters 931–1027 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

FcNAC1 likely participates in strawberry fruit ripening by regulating pectin metabolism during softening.

Taxon
Fragaria chiloensisFragaria chiloensist0
Gene
FcNAC1t0
Outcome
ripening developmente6
Qualifier
regulating pectin metabolisme6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria chiloensis
Fragaria chiloensis · TaxonWill Elder / National Park Service · Public domain · Wikimedia Commons ↗

Verbatim

t0

“FcNAC1 from Fragaria chiloensis fruit”

✓ located verbatim in the source · title, characters 60–97 · show in text ↑
e6

“The results suggest the participation of FcNAC1 during ripening development of strawberry fruit, by regulating pectin metabolism during softening”

✓ located verbatim in the source · abstract, characters 1093–1238 · show in text ↑