Paper · 2018 · The Plant Journal

In vivo detection of protein cysteine sulfenylation in plastids

Barbara De Smet; Patrick Willems; Alvaro D. Fernandez‐Fernandez; et al.

4
claims
8
verbatim quotes
57
citations
3
research areas
✓
Open access

Abstract

Summary Protein cysteine thiols are post‐translationally modified under oxidative stress conditions. Illuminated chloroplasts are one of the important sources of hydrogen peroxide (H 2 O 2 ) and are highly sensitive to environmental stimuli, yet a comprehensive view of the oxidation‐sensitive chloroplast proteome is still missing. By targeting the sulfenic acid YAP 1C‐trapping technology to the plastids of light‐grown Arabidopsis cells, we identified 132 putatively sulfenylated plastid proteins upon H 2 O 2 pulse treatment. Almost half of the sulfenylated proteins are enzymes of the amino acid metabolism. Using metabolomics, we observed a reversible decrease in the levels of the amino acids Ala, Asn, Cys, Gln, Glu, His, Ile, Leu, Lys, Phe, Ser, Thr and Val after H 2 O 2 treatment, which is in line with an anticipated decrease in the levels of the glycolysis and tricarboxylic acid metabolites. Through the identification of an organelle‐tailored proteome, we demonstrated that the subcellular targeting of the YAP 1C probe enables us to study in vivo cysteine sulfenylation at the organellar level. All in all, the identification of these oxidation events in plastids revealed that several enzymes of the amino acid metabolism rapidly undergo cysteine oxidation upon oxidative stress.

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Claims 4

Observationobservedoriginal resultmeasured

Claim · model-written summary

H2O2 pulse treatment identified 132 putatively sulfenylated plastid proteins in Arabidopsis cells.

Taxon
ArabidopsisArabidopsise1
Treatment
H 2 O 2 pulse treatmente0
Outcome
putatively sulfenylated plastid proteinse0
Direction
identifiede0
Value
132e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis cells”

✓ located verbatim in the source · abstract, characters 422–439 · show in text ↑
e0

“we identified 132 putatively sulfenylated plastid proteins upon H 2 O 2 pulse treatment”

✓ located verbatim in the source · abstract, characters 441–528 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Almost half of the sulfenylated proteins are enzymes of amino acid metabolism.

Taxon
ArabidopsisArabidopsise1
Outcome
enzymes of the amino acid metabolisme2
Value
Almost halfe2

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis cells”

✓ located verbatim in the source · abstract, characters 422–439 · show in text ↑
e2

“Almost half of the sulfenylated proteins are enzymes of the amino acid metabolism”

✓ located verbatim in the source · abstract, characters 530–611 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

H2O2 treatment reversibly decreased the levels of 13 amino acids in Arabidopsis cells.

Taxon
ArabidopsisArabidopsise1
Treatment
H 2 O 2 treatmente3
Outcome
levels of the amino acids Ala, Asn, Cys, Gln, Glu, His, Ile, Leu, Lys, Phe, Ser, Thr and Vale3
Direction
decreasee3
Qualifier
reversiblee3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis cells”

✓ located verbatim in the source · abstract, characters 422–439 · show in text ↑
e3

“we observed a reversible decrease in the levels of the amino acids Ala, Asn, Cys, Gln, Glu, His, Ile, Leu, Lys, Phe, Ser, Thr and Val after H 2 O 2 treatment”

✓ located verbatim in the source · abstract, characters 633–790 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The YAP1C probe targeted to plastids enables in vivo study of cysteine sulfenylation at the organellar level.

Taxon
ArabidopsisArabidopsise1
Outcome
in vivo cysteine sulfenylation at the organellar levele4

Not reportedComparatorValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis cells”

✓ located verbatim in the source · abstract, characters 422–439 · show in text ↑
e4

“the subcellular targeting of the YAP 1C probe enables us to study in vivo cysteine sulfenylation at the organellar level”

✓ located verbatim in the source · abstract, characters 989–1109 · show in text ↑

hydrogen peroxide · molecular: metabolites · ArabidopsisPositive and negative results

8 papers: 2 positive, 6 negative or no effect

5 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. no effect

4 papers more in this group

See all 8 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.