Paper · 2016 · PeerJ

Canopy position has a profound effect on soybean seed composition

Steven C. Huber; Kunzhi Li; Randall Nelson; et al.

12
claims
26
verbatim quotes
43
citations
2
research areas
✓
Open access · cc-by

Abstract

Although soybean seeds appear homogeneous, their composition (protein, oil and mineral concentrations) can vary significantly with the canopy position where they were produced. In studies with 10 cultivars grown over a 3-yr period, we found that seeds produced at the top of the canopy have higher concentrations of protein but less oil and lower concentrations of minerals such as Mg, Fe, and Cu compared to seeds produced at the bottom of the canopy. Among cultivars, mean protein concentration (average of different positions) correlated positively with mean concentrations of S, Zn and Fe, but not other minerals. Therefore, on a whole plant basis, the uptake and allocation of S, Zn and Fe to seeds correlated with the production and allocation of reduced N to seed protein; however, the reduced N and correlated minerals (S, Zn and Fe) showed different patterns of allocation among node positions. For example, while mean concentrations of protein and Fe correlated positively, the two parameters correlated negatively in terms of variation with canopy position. Altering the microenvironment within the soybean canopy by removing neighboring plants at flowering increased protein concentration in particular at lower node positions and thus altered the node-position gradient in protein (and oil) without altering the distribution of Mg, Fe and Cu, suggesting different underlying control mechanisms. Metabolomic analysis of developing seeds at different positions in the canopy suggests that availability of free asparagine may be a positive determinant of storage protein accumulation in seeds and may explain the increased protein accumulation in seeds produced at the top of the canopy. Our results establish node-position variation in seed constituents and provide a new experimental system to identify genes controlling key aspects of seed composition. In addition, our results provide an unexpected and simple approach to link agronomic practices to improve human nutrition and health in developing countries because food products produced from seeds at the bottom of the canopy contained higher Fe concentrations than products from the top of the canopy. Therefore, using seeds produced in the lower canopy for production of iron-rich soy foods for human consumption could be important when plants are the major source of protein and human diets can be chronically deficient in Fe and other minerals.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

Top canopy seeds have higher protein concentration than bottom canopy seeds.

Taxon
soybeanGlycine maxt0
Organ / stage
seedse0
Outcome
concentrations of proteine0
Direction
highere0
Comparator
seeds produced at the bottom of the canopye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“seeds produced at the top of the canopy have higher concentrations of protein but less oil and lower concentrations of minerals such as Mg, Fe, and Cu compared to seeds produced at the bottom of the canopy”

✓ located verbatim in the source · abstract, characters 246–451 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Top canopy seeds have less oil than bottom canopy seeds.

Taxon
soybeanGlycine maxt0
Organ / stage
seedse0
Outcome
oile0
Direction
lesse0
Comparator
seeds produced at the bottom of the canopye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“seeds produced at the top of the canopy have higher concentrations of protein but less oil and lower concentrations of minerals such as Mg, Fe, and Cu compared to seeds produced at the bottom of the canopy”

✓ located verbatim in the source · abstract, characters 246–451 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Top canopy seeds have lower Mg, Fe and Cu concentrations than bottom canopy seeds.

Taxon
soybeanGlycine maxt0
Organ / stage
seedse0
Outcome
concentrations of minerals such as Mg, Fe, and Cue0
Direction
lowere0
Comparator
seeds produced at the bottom of the canopye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“seeds produced at the top of the canopy have higher concentrations of protein but less oil and lower concentrations of minerals such as Mg, Fe, and Cu compared to seeds produced at the bottom of the canopy”

✓ located verbatim in the source · abstract, characters 246–451 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Mean protein concentration correlated positively with S, Zn and Fe concentrations across cultivars.

Taxon
soybeanGlycine maxt0
Compound
S, Zn and Fee0
Outcome
mean protein concentratione0
Direction
positivelye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Among cultivars, mean protein concentration (average of different positions) correlated positively with mean concentrations of S, Zn and Fe, but not other minerals.”

✓ located verbatim in the source · abstract, characters 453–617 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

Mean protein concentration did not correlate with other minerals.

Taxon
soybeanGlycine maxt0
Compound
other mineralse0
Outcome
mean protein concentratione0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Among cultivars, mean protein concentration (average of different positions) correlated positively with mean concentrations of S, Zn and Fe, but not other minerals.”

✓ located verbatim in the source · abstract, characters 453–617 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Protein and Fe concentrations correlate negatively across canopy positions.

Taxon
soybeanGlycine maxt0
Organ / stage
canopy positione0
Outcome
protein and Fee0
Direction
negativelye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“while mean concentrations of protein and Fe correlated positively, the two parameters correlated negatively in terms of variation with canopy position.”

✓ located verbatim in the source · abstract, characters 917–1068 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Removing neighboring plants at flowering increased seed protein concentration, particularly at lower nodes.

Taxon
soybeanGlycine maxt0
Organ / stage
lower node positionse0
Treatment
removing neighboring plants at floweringe0
Outcome
protein concentratione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“removing neighboring plants at flowering increased protein concentration in particular at lower node positions”

✓ located verbatim in the source · abstract, characters 1128–1238 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Removing neighbors changed the node position gradient in protein and oil.

Taxon
soybeanGlycine maxt0
Treatment
removing neighboring plants at floweringe1
Outcome
node-position gradient in protein (and oil)e0
Direction
alterede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“thus altered the node-position gradient in protein (and oil) without altering the distribution of Mg, Fe and Cu”

✓ located verbatim in the source · abstract, characters 1243–1354 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
e1

“removing neighboring plants at flowering increased protein concentration”

✓ located verbatim in the source · abstract, characters 1128–1200 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Removing neighbors did not alter Mg, Fe and Cu distribution.

Taxon
soybeanGlycine maxt0
Treatment
removing neighboring plants at floweringe1
Outcome
distribution of Mg, Fe and Cue0
Direction
without alteringe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“without altering the distribution of Mg, Fe and Cu”

✓ located verbatim in the source · abstract, characters 1304–1354 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
e1

“removing neighboring plants at flowering increased protein concentration”

✓ located verbatim in the source · abstract, characters 1128–1200 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Developing seed metabolomics suggests free asparagine availability could promote storage protein accumulation.

Taxon
soybeanGlycine maxt0
Compound
free asparaginee0
Outcome
storage protein accumulation in seedse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“availability of free asparagine may be a positive determinant of storage protein accumulation in seeds”

✓ located verbatim in the source · abstract, characters 1500–1602 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Foods from bottom canopy seeds contained higher Fe than foods from top canopy seeds.

Taxon
soybeanGlycine maxt0
Outcome
Fe concentrationse0
Direction
highere0
Comparator
products from the top of the canopye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“food products produced from seeds at the bottom of the canopy contained higher Fe concentrations than products from the top of the canopy”

✓ located verbatim in the source · abstract, characters 2031–2168 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors recommend lower canopy seeds for iron rich soy foods.

Taxon
soybeanGlycine maxt0
Outcome
using seeds produced in the lower canopy for production of iron-rich soy foodse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“using seeds produced in the lower canopy for production of iron-rich soy foods for human consumption could be important”

✓ located verbatim in the source · abstract, characters 2181–2300 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 41–48 · show in text ↑

stage · nutrient: content · Glycine max (soybean)Positive and negative results

7 papers: 4 positive, 3 negative or no effect

2 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

3 papers more in this group

See all 7 papers →

stage · quality: protein · Glycine max (soybean)Positive and negative results

10 papers: 6 positive, 4 negative or no effect

5 papers in the same direction as this paper · 4 in the opposite direction

  1. negative
  2. no effect
  3. no effect

6 papers more in this group

See all 10 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.