Paper · 2019 · Frontiers in Plant Science

Ammonium Alleviates Manganese Toxicity and Accumulation in Rice by Down-Regulating the Transporter Gene OsNramp5 Through Rhizosphere Acidification

An Yong Hu; Man Man Zheng; Li Ming Sun; et al.

14
claims
30
verbatim quotes
19
citations
2
research areas
✓
Open access · cc-by

Abstract

Ammonium (NH4+) alleviates manganese (Mn) toxicity in various plant species, but the underlying mechanisms are still unclear. In this study, we compared the effects of NH4+ and nitrate (NO3) on rice (Oryza sativa L.) growth, accumulation and distribution of Mn, accumulation of iron (Fe), zinc (Zn) and copper (Cu), root cell wall components and expression of Mn and Fe transporter genes. After rice seedlings were grown in non-pH-buffered nutrient solution for 2 days, the pH of growth medium changed from an initial value of 4.5 to 3.5 and to 5.5 in the presence of NH4+ and in the presence of NO3, respectively. Compared with NO3, ammonium decreased nutrient-solution pH and alleviated Mn toxicity and accumulation in rice under non-pH-buffered conditions. This alleviation disappeared when 5 mM Homo-PIPES pH buffer was added. Regardless of N form, roots, shoots, root cell sap and xylem sap accumulated much lower Mn at pH 3.5 than at pH 5.5, whereas Mn distribution in different leaves and Mn accumulation in root cell walls was affected by neither N form nor pH. Ammonium decreased the expression of the Mn influx transporter gene OsNramp5 in roots under non-pH-buffered conditions, but not under pH-buffered ones. OsNramp5 expression was down-regulated at pH 3.5 compared with pH 5.5. Another efflux Mn transporter gene, OsMTP9, was not regulated by either N form or pH. High pH (5.5) enhanced the expression of the Fe transporter gene OsIRT1 and increased the accumulation of Zn but not Fe or Cu in shoots compared with pH 3.5. Taken together, our results indicate that NH4+ alleviates Mn toxicity and accumulation in rice through the down-regulatory effects of rhizosphere acidification on the Mn influx transporter gene OsNramp5. In addition, the up-regulation of OsIRT1 expression may contribute to the increased Zn uptake by rice at high pH of nutrient solution.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 14

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ammonium lowered solution pH to 3.5 versus 5.5 with nitrate.

Treatment
NH4+e0
Outcome
pH of growth mediume0
Value
3.5e0
Comparator
NO3e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the pH of growth medium changed from an initial value of 4.5 to 3.5 and to 5.5 in the presence of NH4+ and in the presence of NO3, respectively”

✓ located verbatim in the source · abstract, characters 471–615 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ammonium alleviated manganese toxicity relative to nitrate without pH buffer.

Treatment
ammoniume0
Outcome
Mn toxicitye0
Direction
alleviatede0
Qualifier
non-pH-buffered conditionse0
Comparator
NO3e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Compared with NO3, ammonium decreased nutrient-solution pH and alleviated Mn toxicity and accumulation in rice under non-pH-buffered conditions”

✓ located verbatim in the source · abstract, characters 617–761 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ammonium decreased manganese accumulation relative to nitrate without pH buffer.

Treatment
ammoniume0
Outcome
Mn toxicity and accumulatione0
Direction
decreasede0
Qualifier
non-pH-buffered conditionse0
Comparator
NO3e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Compared with NO3, ammonium decreased nutrient-solution pH and alleviated Mn toxicity and accumulation in rice under non-pH-buffered conditions”

✓ located verbatim in the source · abstract, characters 617–761 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Buffering abolished ammonium-mediated relief of manganese toxicity and accumulation.

Treatment
5 mM Homo-PIPES pH buffere0
Outcome
alleviatione0
Direction
disappearede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“This alleviation disappeared when 5 mM Homo-PIPES pH buffer was added”

✓ located verbatim in the source · abstract, characters 763–832 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Rice roots, shoots, root cell sap and xylem sap accumulated less manganese at pH 3.5 than 5.5.

Treatment
pH 3.5e0
Outcome
Mne0
Direction
much lowere0
Comparator
pH 5.5e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“roots, shoots, root cell sap and xylem sap accumulated much lower Mn at pH 3.5 than at pH 5.5”

✓ located verbatim in the source · abstract, characters 856–949 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Leaf manganese distribution was unaffected by nitrogen form or pH.

Treatment
N form nor pHe0
Outcome
Mn distribution in different leavese0
Direction
neithere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Mn distribution in different leaves and Mn accumulation in root cell walls was affected by neither N form nor pH”

✓ located verbatim in the source · abstract, characters 959–1071 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Root-cell-wall manganese accumulation was unaffected by nitrogen form or pH.

Treatment
N form nor pHe0
Outcome
Mn accumulation in root cell wallse0
Direction
neithere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Mn distribution in different leaves and Mn accumulation in root cell walls was affected by neither N form nor pH”

✓ located verbatim in the source · abstract, characters 959–1071 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ammonium lowered root OsNramp5 expression without pH buffer but not with buffer.

Organ / stage
rootse0
Treatment
Ammoniume0
Gene
OsNramp5e0
Outcome
expression of the Mn influx transporter gene OsNramp5e0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Ammonium decreased the expression of the Mn influx transporter gene OsNramp5 in roots under non-pH-buffered conditions, but not under pH-buffered ones”

✓ located verbatim in the source · abstract, characters 1073–1223 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

OsNramp5 expression was lower at pH 3.5 than at pH 5.5.

Treatment
pH 3.5e0
Gene
OsNramp5e0
Outcome
OsNramp5 expressione0
Direction
down-regulatede0
Comparator
pH 5.5e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsNramp5 expression was down-regulated at pH 3.5 compared with pH 5.5”

✓ located verbatim in the source · abstract, characters 1225–1294 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

OsMTP9 was not regulated by nitrogen form or pH.

Treatment
N form or pHe0
Gene
OsMTP9e0
Outcome
OsMTP9e0
Direction
not regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsMTP9, was not regulated by either N form or pH”

✓ located verbatim in the source · abstract, characters 1332–1380 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Higher pH enhanced OsIRT1 expression.

Treatment
High pH (5.5)e0
Gene
OsIRT1e0
Outcome
expression of the Fe transporter gene OsIRT1e0
Direction
enhancede0
Comparator
pH 3.5e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“High pH (5.5) enhanced the expression of the Fe transporter gene OsIRT1”

✓ located verbatim in the source · abstract, characters 1382–1453 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
e1

“High pH (5.5) enhanced the expression of the Fe transporter gene OsIRT1 and increased the accumulation of Zn but not Fe or Cu in shoots compared with pH 3.5”

✓ located verbatim in the source · abstract, characters 1382–1538 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Higher pH increased shoot zinc accumulation.

Organ / stage
shootse0
Treatment
High pH (5.5)e1
Outcome
accumulation of Zne0
Direction
increasede0
Comparator
pH 3.5e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“increased the accumulation of Zn but not Fe or Cu in shoots compared with pH 3.5”

✓ located verbatim in the source · abstract, characters 1458–1538 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
e1

“High pH (5.5) enhanced the expression of the Fe transporter gene OsIRT1 and increased the accumulation of Zn but not Fe or Cu in shoots compared with pH 3.5”

✓ located verbatim in the source · abstract, characters 1382–1538 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Higher pH did not increase shoot iron accumulation.

Treatment
High pH (5.5)e1
Outcome
Fee0
Direction
note0
Comparator
pH 3.5e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“increased the accumulation of Zn but not Fe or Cu in shoots compared with pH 3.5”

✓ located verbatim in the source · abstract, characters 1458–1538 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
e1

“High pH (5.5) enhanced the expression of the Fe transporter gene OsIRT1 and increased the accumulation of Zn but not Fe or Cu in shoots compared with pH 3.5”

✓ located verbatim in the source · abstract, characters 1382–1538 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Higher pH did not increase shoot copper accumulation.

Treatment
High pH (5.5)e1
Outcome
Cue0
Direction
note0
Comparator
pH 3.5e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“increased the accumulation of Zn but not Fe or Cu in shoots compared with pH 3.5”

✓ located verbatim in the source · abstract, characters 1458–1538 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 59–63 · show in text ↑
e1

“High pH (5.5) enhanced the expression of the Fe transporter gene OsIRT1 and increased the accumulation of Zn but not Fe or Cu in shoots compared with pH 3.5”

✓ located verbatim in the source · abstract, characters 1382–1538 · show in text ↑

alkalinity · nutrient: content · Oryza sativa (rice)Positive and negative results

10 papers: 4 positive, 6 negative or no effect

5 papers in the same direction as this paper · 4 reporting no difference from an alternative

  1. positive
    Alkali-enhanced biochars increased rice silicon uptake by 6–21% relative to the listed comparators.

    Effect of pyrolysis temperature on Si release of alkali-enhanced Si-rich biochar and plant response · 2021 · compared with lower temperature biochars, non-enhanced biochars, or conventional Si fertilizers

    No difference from an alternative

  2. positive
  3. positive

6 papers more in this group

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ph · nutrient: content · Oryza sativa (rice)Positive and negative results

12 papers: 6 positive, 6 negative or no effect

5 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. positive
  3. positive

8 papers more in this group

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nitrogen · pest · Oryza sativa (rice)Positive and negative results

34 papers: 25 positive, 9 negative or no effect

24 papers in the same direction as this paper · 9 in the opposite direction

  1. negative
  2. negative
  3. negative

30 papers more in this group

See all 34 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.