Paper · 2021 · Journal of Environmental Sciences

Comparative physiological and transcriptomic analyses illuminate common mechanisms by which silicon alleviates cadmium and arsenic toxicity in rice seedlings

Huiqiong Chen; Xiaoyu Liang; Xiaomei Gong; et al.

9
claims
16
verbatim quotes
52
citations
2
research areas
✓
Open access · cc-by-nc-nd

Abstract

The inessential heavy metal/loids cadmium (Cd) and arsenic (As), which often co-occur in polluted paddy soils, are toxic to rice. Silicon (Si) treatment is known to reduce Cd and As toxicity in rice plants. To better understand the shared mechanisms by which Si alleviates Cd and As stress, rice seedlings were hydroponically exposed to Cd or As, then treated with Si. The addition of Si significantly ameliorated the inhibitory effects of Cd and As on rice seedling growth. Si supplementation decreased Cd and As translocation from roots to shoots, and significantly reduced Cd- and As-induced reactive oxygen species generation in rice seedlings. Transcriptomics analyses were conducted to elucidate molecular mechanisms underlying the Si-mediated response to Cd or As stress in rice. The expression patterns of the differentially expressed genes in Cd- or As-stressed rice roots with and without Si application were compared. The transcriptomes of the Cd- and As-stressed rice roots were similarly and profoundly reshaped by Si application, suggesting that Si may play a fundamental, active role in plant defense against heavy metal/loid stresses by modulating whole genome expression. We also identified two novel genes, Os01g0524500 and Os06g0514800, encoding a myeloblastosis (MYB) transcription factor and a thionin, respectively, which may be candidate targets for Si to alleviate Cd and As stress in rice, as well as for the generation of Cd- and/or As-resistant plants. This study provides valuable resources for further clarification of the shared molecular mechanisms underlying the Si-mediated alleviation of Cd and As toxicity in rice.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc-nd. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Silicon ameliorated cadmium inhibition of rice seedling growth.

Taxon
rice seedlingsOryza sativat0
Treatment
Sie0
Outcome
inhibitory effects of Cde0
Direction
amelioratede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The addition of Si significantly ameliorated the inhibitory effects of Cd and As on rice seedling growth.”

✓ located verbatim in the source · abstract, characters 369–474 · show in text ↑
t0

“rice seedlings”

✓ located verbatim in the source · title, characters 143–157 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Silicon ameliorated arsenic inhibition of rice seedling growth.

Taxon
rice seedlingsOryza sativat0
Treatment
Sie0
Outcome
inhibitory effects of Cd and Ase0
Direction
amelioratede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The addition of Si significantly ameliorated the inhibitory effects of Cd and As on rice seedling growth.”

✓ located verbatim in the source · abstract, characters 369–474 · show in text ↑
t0

“rice seedlings”

✓ located verbatim in the source · title, characters 143–157 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon decreased cadmium translocation from roots to shoots.

Taxon
rice seedlingsOryza sativat0
Treatment
Si supplementatione0
Outcome
Cd and As translocation from roots to shootse0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Si supplementation decreased Cd and As translocation from roots to shoots, and significantly reduced Cd- and As-induced reactive oxygen species generation in rice seedlings.”

✓ located verbatim in the source · abstract, characters 475–648 · show in text ↑
t0

“rice seedlings”

✓ located verbatim in the source · title, characters 143–157 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon decreased arsenic translocation from roots to shoots.

Taxon
rice seedlingsOryza sativat0
Treatment
Si supplementatione0
Outcome
Cd and As translocation from roots to shootse0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Si supplementation decreased Cd and As translocation from roots to shoots, and significantly reduced Cd- and As-induced reactive oxygen species generation in rice seedlings.”

✓ located verbatim in the source · abstract, characters 475–648 · show in text ↑
t0

“rice seedlings”

✓ located verbatim in the source · title, characters 143–157 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Silicon reduced cadmium-induced reactive oxygen species generation.

Taxon
rice seedlingsOryza sativat0
Treatment
Si supplementatione0
Outcome
Cd- and As-induced reactive oxygen species generatione0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Si supplementation decreased Cd and As translocation from roots to shoots, and significantly reduced Cd- and As-induced reactive oxygen species generation in rice seedlings.”

✓ located verbatim in the source · abstract, characters 475–648 · show in text ↑
t0

“rice seedlings”

✓ located verbatim in the source · title, characters 143–157 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Silicon reduced arsenic-induced reactive oxygen species generation.

Taxon
rice seedlingsOryza sativat0
Treatment
Si supplementatione0
Outcome
Cd- and As-induced reactive oxygen species generatione0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Si supplementation decreased Cd and As translocation from roots to shoots, and significantly reduced Cd- and As-induced reactive oxygen species generation in rice seedlings.”

✓ located verbatim in the source · abstract, characters 475–648 · show in text ↑
t0

“rice seedlings”

✓ located verbatim in the source · title, characters 143–157 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon similarly and profoundly reshaped transcriptomes of cadmium-stressed rice roots.

Taxon
rice seedlingsOryza sativat0
Treatment
Si applicatione0
Outcome
transcriptomes of the Cd- and As-stressed rice rootse0
Direction
reshapede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The transcriptomes of the Cd- and As-stressed rice roots were similarly and profoundly reshaped by Si application, suggesting that Si may play a fundamental, active role in plant defense against heavy metal/loid stresses by modulating whole genome expression.”

✓ located verbatim in the source · abstract, characters 929–1188 · show in text ↑
t0

“rice seedlings”

✓ located verbatim in the source · title, characters 143–157 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Os01g0524500 was identified as a candidate silicon target for alleviating cadmium and arsenic stress.

Gene
Os01g0524500e0
Outcome
candidate targets for Si to alleviate Cd and As stress in ricee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We also identified two novel genes, Os01g0524500 and Os06g0514800, encoding a myeloblastosis (MYB) transcription factor and a thionin, respectively, which may be candidate targets for Si to alleviate Cd and As stress in rice, as well as for the generation of Cd- and/or As-resistant plants.”

✓ located verbatim in the source · abstract, characters 1189–1479 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Os06g0514800 was identified as a candidate silicon target for alleviating cadmium and arsenic stress.

Gene
Os06g0514800e0
Outcome
candidate targets for Si to alleviate Cd and As stress in ricee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We also identified two novel genes, Os01g0524500 and Os06g0514800, encoding a myeloblastosis (MYB) transcription factor and a thionin, respectively, which may be candidate targets for Si to alleviate Cd and As stress in rice, as well as for the generation of Cd- and/or As-resistant plants.”

✓ located verbatim in the source · abstract, characters 1189–1479 · show in text ↑

silicon atom · physiology: oxidative · Oryza sativa (rice)Results differ

34 papers: 33 positive, 1 negative or no effect

32 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. no effect
  3. positive

30 papers more in this group

See all 34 papers →

silicon atom · nutrient: content · Oryza sativa (rice)Results differ

177 papers: 164 positive, 13 negative or no effect

163 papers in the same direction as this paper · 13 in the opposite direction

  1. positive
  2. positive
  3. positive

173 papers more in this group

See all 177 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.