Paper · 2021 · Russian Agricultural Sciences

Isolation and Characterization of a Brenneria sp. Shown to Be the Causal Agent of Bleeding Canker Disease of Populus nigra in Iran

Yousef Moradi-Amirabad; Gholam Khodakaramian; Teresa Coutinho

8
claims
15
verbatim quotes
1
citations
2
research areas
—
Not open access

Abstract

In 2017, cankers were observed on mature Populus nigra L. trees in Iran. The disease was characterized by copious amounts of brown exudation from cankers on the trunk, crotch and pruning scars in spring, summer and early autumn. Upon removal of the bark, reddish/brown lesions were visible in the woody tissue of the host. These symptoms were similar to those described on the same host in Spain. Isolations were performed from infected tissue. Pale cream bacterial colonies were consistently isolated from the infected tissue. The isolates were phenotypically identical to members of Pectobacteriaceae specifically Brenneria spp. The nucleotide sequences of the 16S rRNA and house-keeping genes, gyrB, infB, rpoB, and gapA indicated that the isolates from the trees in Iran were similar to Brenneria salicis, but formed a distinct cluster on their own suggesting that this was a new species of Brenneria. Pathogenicity tests were performed by inoculation of stems, trunks and shoots of age height where, poplar. At the site of inoculation, all isolates produced necrotic lesions and exudates 30 days after inoculation. Re-isolations and confirmation of their identity were performed fulfilling Koch’s postulates.

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Claims 8

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Cankers were observed on mature Populus nigra trees in Iran in 2017.

Taxon
Populus nigra L.Populus nigrae0
Organ / stage
maturee0
Outcome
cankerse0
Setting
Irane0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus nigra
Populus nigra · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“In 2017, cankers were observed on mature Populus nigra L. trees in Iran.”

✓ located verbatim in the source · abstract, characters 0–72 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The cankers exuded brown material from trunks, crotches and pruning scars in spring through early autumn.

Taxon
Populus nigraPopulus nigrat0
Organ / stage
trunk, crotch and pruning scarse0
Outcome
brown exudation from cankerse0
Qualifier
spring, summer and early autumne0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus nigra
Populus nigra · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“copious amounts of brown exudation from cankers on the trunk, crotch and pruning scars in spring, summer and early autumn”

✓ located verbatim in the source · abstract, characters 106–227 · show in text ↑
t0

“Populus nigra”

✓ located verbatim in the source · title, characters 109–122 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Reddish-brown lesions were visible in woody tissue beneath the bark.

Taxon
Populus nigraPopulus nigrat0
Organ / stage
woody tissuee0
Outcome
reddish/brown lesionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus nigra
Populus nigra · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Upon removal of the bark, reddish/brown lesions were visible in the woody tissue of the host.”

✓ located verbatim in the source · abstract, characters 229–322 · show in text ↑
t0

“Populus nigra”

✓ located verbatim in the source · title, characters 109–122 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pale cream bacterial colonies were consistently isolated from infected tissue.

Taxon
Populus nigraPopulus nigrat0
Outcome
Pale cream bacterial coloniese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus nigra
Populus nigra · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Pale cream bacterial colonies were consistently isolated from the infected tissue.”

✓ located verbatim in the source · abstract, characters 445–527 · show in text ↑
t0

“Populus nigra”

✓ located verbatim in the source · title, characters 109–122 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The isolates were phenotypically identical to members of Pectobacteriaceae, specifically Brenneria spp.

Taxon
Populus nigraPopulus nigrat0
Interactor
Brenneria spp.Brenneriae0pathogen
Outcome
phenotypically identical to members of Pectobacteriaceae specifically Brenneria spp.e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus nigra
Populus nigra · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗
Brenneria
Brenneria · InteractorRebecca D. Prescott, Yvonne L. Chan, Eric J. Tong, Fiona Bunn, Chiyoko T. Onouye, Christy Handel, Chien-Chi Lo, Karen Davenport, Shannon Johnson, Mark Flynn, Je · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The isolates were phenotypically identical to members of Pectobacteriaceae specifically Brenneria spp.”

✓ located verbatim in the source · abstract, characters 528–630 · show in text ↑
t0

“Populus nigra”

✓ located verbatim in the source · title, characters 109–122 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The Iranian isolates were similar to Brenneria salicis by gene sequences but formed a distinct cluster, suggesting a new Brenneria species.

Taxon
Populus nigraPopulus nigrat0
Interactor
Brenneria salicisBrenneria salicise0pathogen
Outcome
formed a distinct cluster on their owne0
Setting
Irane0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus nigra
Populus nigra · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The nucleotide sequences of the 16S rRNA and house-keeping genes, gyrB, infB, rpoB, and gapA indicated that the isolates from the trees in Iran were similar to Brenneria salicis, but formed a distinct cluster on their own suggesting that this was a new species of Brenneria.”

✓ located verbatim in the source · abstract, characters 631–905 · show in text ↑
t0

“Populus nigra”

✓ located verbatim in the source · title, characters 109–122 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

All isolates produced necrotic lesions and exudates 30 days after inoculation of poplar.

Taxon
poplarPopuluse1
Organ / stage
stems, trunks and shootse1
Treatment
inoculatione0
Outcome
necrotic lesions and exudatese0
Qualifier
30 days after inoculatione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“At the site of inoculation, all isolates produced necrotic lesions and exudates 30 days after inoculation.”

✓ located verbatim in the source · abstract, characters 1013–1119 · show in text ↑
e1

“Pathogenicity tests were performed by inoculation of stems, trunks and shoots of age height where, poplar.”

✓ located verbatim in the source · abstract, characters 906–1012 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Re-isolation and identity confirmation fulfilled Koch’s postulates.

Taxon
Populus nigraPopulus nigrat0
Outcome
fulfilling Koch’s postulatese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus nigra
Populus nigra · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Re-isolations and confirmation of their identity were performed fulfilling Koch’s postulates.”

✓ located verbatim in the source · abstract, characters 1120–1213 · show in text ↑
t0

“Populus nigra”

✓ located verbatim in the source · title, characters 109–122 · show in text ↑

inoculation · disease · Populus (poplar)Positive and negative results

9 papers: 4 positive, 5 negative or no effect

4 papers in the same direction as this paper · 4 in the opposite direction

  1. negative
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.