Paper · 2022 · Frontiers in Plant Science

Transcriptome Approach Reveals the Response Mechanism of Heimia myrtifolia (Lythraceae, Myrtales) to Drought Stress

Lin Lin; Jie Wang; Qun Wang; et al.

10
claims
20
verbatim quotes
16
citations
3
research areas
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Open access · cc-by

Abstract

Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia . The molecular processes of drought resistance in H. myrtifolia remain unknown, which has limited its application. In our study, transcriptome analyzes were compared across three treatment groups (CK, T1, and T2), to investigate the molecular mechanism of drought resistance. Plant leaves wilted and drooped as the duration of drought stress increased. The relative water content of the leaves declined dramatically, and relative electrolyte leakage rose progressively. Using an RNA-Seq approach, a total of 62,015 unigenes with an average length of 1730 bp were found, with 86.61% of them annotated to seven databases, and 14,272 differentially expressed genes (DEGs) were identified in drought stress. GO and KEGG enrichment analyzes of the DEGs revealed significantly enriched KEGG pathways, including photosynthesis, photosynthetic antenna proteins, plant hormone signal transduction, glutathione metabolism, and ascorbate and aldarate metabolism. Abscisic acid signal transduction was the most prevalent in the plant hormone signal transduction pathway, and other plant hormone signal transductions were also involved in the drought stress response. The transcription factors (including MYB, NAC, WRKY, and bHLH) and related differential genes on significantly enriched pathways all played important roles in the drought process, such as photosynthesis-related genes and antioxidant enzyme genes. In conclusion, this study will provide several genetic resources for further investigation of the molecular processes that will be beneficial to H. myrtifolia cultivation and breeding.

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Claims 10

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Leaves of Heimia myrtifolia wilted and drooped as drought stress duration increased.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Treatment
drought stresse1
Outcome
wilted and droopede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e1

“Plant leaves wilted and drooped as the duration of drought stress increased”

✓ located verbatim in the source · abstract, characters 387–462 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Leaf relative water content declined dramatically under drought stress.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Outcome
relative water content of the leavese2
Direction
declinede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e2

“The relative water content of the leaves declined dramatically, and relative electrolyte leakage rose progressively”

✓ located verbatim in the source · abstract, characters 464–579 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Relative electrolyte leakage rose progressively under drought stress.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Outcome
relative electrolyte leakagee2
Direction
rosee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e2

“The relative water content of the leaves declined dramatically, and relative electrolyte leakage rose progressively”

✓ located verbatim in the source · abstract, characters 464–579 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

RNA-seq assembled 62,015 unigenes with an average length of 1730 bp.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Outcome
unigenese3
Value
62,015 unigenese3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e3

“Using an RNA-Seq approach, a total of 62,015 unigenes with an average length of 1730 bp were found, with 86.61% of them annotated to seven databases”

✓ located verbatim in the source · abstract, characters 581–729 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

86.61% of the unigenes were annotated to seven databases.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Outcome
annotated to seven databasese3
Value
86.61%e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e3

“Using an RNA-Seq approach, a total of 62,015 unigenes with an average length of 1730 bp were found, with 86.61% of them annotated to seven databases”

✓ located verbatim in the source · abstract, characters 581–729 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

14,272 differentially expressed genes were identified in drought stress.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Treatment
drought stresse4
Outcome
differentially expressed genes (DEGs)e4
Value
14,272e4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e4

“14,272 differentially expressed genes (DEGs) were identified in drought stress”

✓ located verbatim in the source · abstract, characters 735–813 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Photosynthesis, photosynthetic antenna proteins and plant hormone signal transduction pathways were significantly enriched among DEGs.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Outcome
photosynthesis, photosynthetic antenna proteins, plant hormone signal transductione5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e5

“GO and KEGG enrichment analyzes of the DEGs revealed significantly enriched KEGG pathways, including photosynthesis, photosynthetic antenna proteins, plant hormone signal transduction, glutathione metabolism, and ascorbate and aldarate metabolism”

✓ located verbatim in the source · abstract, characters 815–1061 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Glutathione metabolism and ascorbate and aldarate metabolism pathways were significantly enriched among DEGs.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Outcome
glutathione metabolism, and ascorbate and aldarate metabolisme5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e5

“GO and KEGG enrichment analyzes of the DEGs revealed significantly enriched KEGG pathways, including photosynthesis, photosynthetic antenna proteins, plant hormone signal transduction, glutathione metabolism, and ascorbate and aldarate metabolism”

✓ located verbatim in the source · abstract, characters 815–1061 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Abscisic acid signal transduction was the most prevalent hormone signal pathway under drought.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Compound
Abscisic acide6
Outcome
most prevalente6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e6

“Abscisic acid signal transduction was the most prevalent in the plant hormone signal transduction pathway”

✓ located verbatim in the source · abstract, characters 1063–1168 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

MYB, NAC, WRKY and bHLH transcription factors and related differential genes are proposed to play important roles in the drought process.

Taxon
Heimia myrtifoliaHeimia myrtifoliae0
Gene
MYB, NAC, WRKY, and bHLHe7
Outcome
drought processe7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Heimia myrtifolia
Heimia myrtifolia · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Drought is a major environmental condition that inhibits the development and cultivation of Heimia myrtifolia”

✓ located verbatim in the source · abstract, characters 0–109 · show in text ↑
e7

“The transcription factors (including MYB, NAC, WRKY, and bHLH) and related differential genes on significantly enriched pathways all played important roles in the drought process”

✓ located verbatim in the source · abstract, characters 1266–1444 · show in text ↑