Paper · 2022 · International Journal of Molecular Sciences

Functional Characterization of Ubiquitination Genes in the Interaction of Soybean—Heterodera glycines

Nawei Qi; Jichen Yan; Piao Lei; et al.

5
claims
14
verbatim quotes
6
citations
2
research areas
✓
Open access · cc-by

Abstract

Ubiquitination is a kind of post-translational modification of proteins that plays an important role in plant response to biotic and abiotic stress. The response of soybean GmPUB genes to soybean cyst nematode (SCN, Heterodera glycines) infection is largely unknown. In this study, quantitative real-time PCR (qRT-PCR) was performed to detect the relative expression of 49 GmPUB genes in susceptible cultivar William 82 and resistant cultivar Huipizhi after SCN inoculation. The results show that GmPUB genes responded to cyst nematode infection at 1 day post-inoculation (dpi), 5 dpi, 10 dpi and 15 dpi. The expression levels of GmPUB16A, GmPUB20A, GmCHIPA, GmPUB33A, GmPUB23A and GmPUB24A were dramatically changed during SCN infection. Furthermore, functional analysis of these GmPUB genes by overexpression and RNAi showed that GmPUB20A, GmPUB33A and GmPUB24A negatively regulated soybean resistance under SCN stress. The results from our present study provide insights into the complicated molecular mechanism of the interaction between soybean and SCN.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 5

Observationobservedoriginal resultmeasured

Claim · model-written summary

GmPUB genes responded to cyst nematode infection at four post-inoculation times.

Taxon
SoybeanGlycine maxt0
Interactor
cyst nematodee0pathogen
Gene
GmPUB genese0
Outcome
responded to cyst nematode infectione0
Qualifier
1 day post-inoculation (dpi), 5 dpi, 10 dpi and 15 dpie0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“GmPUB genes responded to cyst nematode infection at 1 day post-inoculation (dpi), 5 dpi, 10 dpi and 15 dpi”

✓ located verbatim in the source · abstract, characters 497–603 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 74–81 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Expression of six named GmPUB genes changed dramatically during infection.

Taxon
SoybeanGlycine maxt0
Interactor
Heterodera glycinesHeterodera glycinese1pathogen
Gene
GmPUB16A, GmPUB20A, GmCHIPA, GmPUB33A, GmPUB23A and GmPUB24Ae0
Outcome
expression levelse0
Direction
dramatically changede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Heterodera glycines
Heterodera glycines · InteractorAgricultural Research Service · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The expression levels of GmPUB16A, GmPUB20A, GmCHIPA, GmPUB33A, GmPUB23A and GmPUB24A were dramatically changed during SCN infection”

✓ located verbatim in the source · abstract, characters 605–737 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 74–81 · show in text ↑
e1

“soybean cyst nematode (SCN, Heterodera glycines) infection”

✓ located verbatim in the source · abstract, characters 188–246 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The gene GmPUB20A negatively regulated soybean resistance to SCN.

Taxon
SoybeanGlycine maxt0
Treatment
overexpression and RNAie0
Interactor
Heterodera glycinesHeterodera glycinese1pathogen
Gene
GmPUB20Ae0
Outcome
soybean resistancee0
Direction
negatively regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Heterodera glycines
Heterodera glycines · InteractorAgricultural Research Service · Public domain · Wikimedia Commons ↗

Verbatim

e0

“functional analysis of these GmPUB genes by overexpression and RNAi showed that GmPUB20A, GmPUB33A and GmPUB24A negatively regulated soybean resistance under SCN stress”

✓ located verbatim in the source · abstract, characters 752–920 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 74–81 · show in text ↑
e1

“soybean cyst nematode (SCN, Heterodera glycines) infection”

✓ located verbatim in the source · abstract, characters 188–246 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The gene GmPUB33A negatively regulated soybean resistance to SCN.

Taxon
SoybeanGlycine maxt0
Treatment
overexpression and RNAie0
Interactor
Heterodera glycinesHeterodera glycinese1pathogen
Gene
GmPUB33Ae0
Outcome
soybean resistancee0
Direction
negatively regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Heterodera glycines
Heterodera glycines · InteractorAgricultural Research Service · Public domain · Wikimedia Commons ↗

Verbatim

e0

“functional analysis of these GmPUB genes by overexpression and RNAi showed that GmPUB20A, GmPUB33A and GmPUB24A negatively regulated soybean resistance under SCN stress”

✓ located verbatim in the source · abstract, characters 752–920 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 74–81 · show in text ↑
e1

“soybean cyst nematode (SCN, Heterodera glycines) infection”

✓ located verbatim in the source · abstract, characters 188–246 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The gene GmPUB24A negatively regulated soybean resistance to SCN.

Taxon
SoybeanGlycine maxt0
Treatment
overexpression and RNAie0
Interactor
Heterodera glycinesHeterodera glycinese1pathogen
Gene
GmPUB24Ae0
Outcome
soybean resistancee0
Direction
negatively regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Heterodera glycines
Heterodera glycines · InteractorAgricultural Research Service · Public domain · Wikimedia Commons ↗

Verbatim

e0

“functional analysis of these GmPUB genes by overexpression and RNAi showed that GmPUB20A, GmPUB33A and GmPUB24A negatively regulated soybean resistance under SCN stress”

✓ located verbatim in the source · abstract, characters 752–920 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 74–81 · show in text ↑
e1

“soybean cyst nematode (SCN, Heterodera glycines) infection”

✓ located verbatim in the source · abstract, characters 188–246 · show in text ↑

overexpression · Heterodera glycines · Glycine max (soybean)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

loss of function · Heterodera glycines · Glycine max (soybean)Positive and negative results

12 papers: 6 positive, 6 negative or no effect

5 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. positive
  3. positive

8 papers more in this group

See all 12 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.