Abstract

The transcription factor SHE1 was induced by tobacco mosaic virus (TMV) infection in tobacco cv. Samsun NN (SNN) and SHE1 inhibited TMV accumulation when expressed constitutively. To better understand the role of SHE1 in virus infection, transgenic SNN tobacco plants generated to over-express SHE1 (OEx-SHE1) or silence expression of SHE1 (si-SHE1) were infected with TMV. OEx-SHE1 affected the local lesion resistance response to TMV, whereas si-SHE1 did not. However, si-SHE1 allowed a slow systemic infection to occur in SNN tobacco. An inhibitor of virus replication (IVR) was known to reduce the accumulation of TMV in SNN tobacco. Analysis of SHE1 and IVR mRNA levels in OEx-SHE1 plants showed constitutive expression of both mRNAs, whereas both mRNAs were less expressed in si-SHE1 plants, even after TMV infection, indicating that SHE1 and IVR were associated with a common signaling pathway. SHE1 and IVR interacted with each other in four different assay systems. The yeast two-hybrid assay also delimited sequences required for the interaction of these two proteins to the SHE1 central 58-79% region and the IVR C-terminal 50% of the protein sequences. This suggests that SHE is a transcription factor involved in the induction of IVR and that IVR binds to SHE1 to regulate its own synthesis.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

TMV infection induced SHE1 in SNN tobacco.

Material
Samsun NNe0
Treatment
tobacco mosaic virus (TMV) infectione0
Interactor
tobacco mosaic virus (TMV)Tobacco mosaic viruse0pathogen
Gene
SHE1e0
Outcome
SHE1e0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Tobacco mosaic virus
Tobacco mosaic virus · InteractorFrank Vincentz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The transcription factor SHE1 was induced by tobacco mosaic virus (TMV) infection in tobacco cv. Samsun NN (SNN)”

✓ located verbatim in the source · abstract, characters 0–112 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Constitutive SHE1 expression inhibited TMV accumulation.

Treatment
expressed constitutivelye0
Interactor
TMVTobacco mosaic viruse0pathogen
Gene
SHE1e0
Outcome
TMV accumulatione0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Tobacco mosaic virus
Tobacco mosaic virus · InteractorFrank Vincentz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“SHE1 inhibited TMV accumulation when expressed constitutively.”

✓ located verbatim in the source · abstract, characters 117–179 · show in text ↑
t0

“Tobacco”

✓ located verbatim in the source · title, characters 138–145 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

SHE1 overexpression affected the local lesion resistance response to TMV.

Treatment
OEx-SHE1e0
Interactor
TMVTobacco mosaic viruse0pathogen
Gene
SHE1e0
Outcome
local lesion resistance response to TMVe0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Tobacco mosaic virus
Tobacco mosaic virus · InteractorFrank Vincentz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“OEx-SHE1 affected the local lesion resistance response to TMV, whereas si-SHE1 did not.”

✓ located verbatim in the source · abstract, characters 374–461 · show in text ↑
t0

“Tobacco”

✓ located verbatim in the source · title, characters 138–145 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

SHE1 silencing did not affect the local lesion resistance response to TMV.

Treatment
si-SHE1e0
Interactor
TMVTobacco mosaic viruse0pathogen
Gene
SHE1e0
Outcome
local lesion resistance response to TMVe0
Direction
did note0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Tobacco mosaic virus
Tobacco mosaic virus · InteractorFrank Vincentz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“OEx-SHE1 affected the local lesion resistance response to TMV, whereas si-SHE1 did not.”

✓ located verbatim in the source · abstract, characters 374–461 · show in text ↑
t0

“Tobacco”

✓ located verbatim in the source · title, characters 138–145 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

SHE1 silencing allowed slow systemic TMV infection in SNN tobacco.

Material
SNNe0
Treatment
si-SHE1e0
Interactor
TMVTobacco mosaic viruse1pathogen
Gene
SHE1e0
Outcome
slow systemic infectione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Tobacco mosaic virus
Tobacco mosaic virus · InteractorFrank Vincentz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“si-SHE1 allowed a slow systemic infection to occur in SNN tobacco.”

✓ located verbatim in the source · abstract, characters 471–537 · show in text ↑
e1

“tobacco mosaic virus (TMV) infection in tobacco cv. Samsun NN (SNN)”

✓ located verbatim in the source · abstract, characters 45–112 · show in text ↑
t0

“The Virus-Induced Transcription Factor SHE1 Interacts with and Regulates Expression of the Inhibitor of Virus Replication (IVR) in N Gene Tobacco”

✓ located verbatim in the source · title, characters 0–145 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

SHE1 overexpressing plants constitutively expressed SHE1 and IVR mRNAs.

Treatment
OEx-SHE1e0
Gene
SHE1 and IVRe1
Outcome
constitutive expression of both mRNAse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“OEx-SHE1 plants showed constitutive expression of both mRNAs”

✓ located verbatim in the source · abstract, characters 678–738 · show in text ↑
e1

“SHE1 and IVR interacted with each other in four different assay systems.”

✓ located verbatim in the source · abstract, characters 902–974 · show in text ↑
t0

“The Virus-Induced Transcription Factor SHE1 Interacts with and Regulates Expression of the Inhibitor of Virus Replication (IVR) in N Gene Tobacco”

✓ located verbatim in the source · title, characters 0–145 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

SHE1 silencing reduced SHE1 and IVR mRNA expression even after TMV infection.

Treatment
si-SHE1e0
Interactor
TMVTobacco mosaic viruse0pathogen
Gene
SHE1 and IVRe1
Outcome
both mRNAse0
Direction
less expressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Tobacco mosaic virus
Tobacco mosaic virus · InteractorFrank Vincentz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“both mRNAs were less expressed in si-SHE1 plants, even after TMV infection”

✓ located verbatim in the source · abstract, characters 748–822 · show in text ↑
e1

“SHE1 and IVR interacted with each other in four different assay systems.”

✓ located verbatim in the source · abstract, characters 902–974 · show in text ↑
t0

“The Virus-Induced Transcription Factor SHE1 Interacts with and Regulates Expression of the Inhibitor of Virus Replication (IVR) in N Gene Tobacco”

✓ located verbatim in the source · title, characters 0–145 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SHE1 and IVR interacted in four assay systems.

Gene
SHE1 and IVRe0
Outcome
interacted with each othere0
Value
four different assay systemse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“SHE1 and IVR interacted with each other in four different assay systems.”

✓ located verbatim in the source · abstract, characters 902–974 · show in text ↑
t0

“Tobacco”

✓ located verbatim in the source · title, characters 138–145 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Protein interaction required the SHE1 central 58-79% region.

Organ / stage
centrale0
Gene
SHE1e0
Outcome
sequences required for the interactione0
Value
58-79%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“sequences required for the interaction of these two proteins to the SHE1 central 58-79% region and the IVR C-terminal 50% of the protein sequences.”

✓ located verbatim in the source · abstract, characters 1017–1164 · show in text ↑
t0

“Tobacco”

✓ located verbatim in the source · title, characters 138–145 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Protein interaction required the IVR C-terminal 50% region.

Gene
IVRe0
Outcome
sequences required for the interactione0
Value
50%e0
Qualifier
C-terminale0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“sequences required for the interaction of these two proteins to the SHE1 central 58-79% region and the IVR C-terminal 50% of the protein sequences.”

✓ located verbatim in the source · abstract, characters 1017–1164 · show in text ↑
t0

“Tobacco”

✓ located verbatim in the source · title, characters 138–145 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors propose SHE1 induces IVR and IVR binding regulates its own synthesis.

Gene
IVRe0
Outcome
regulate its own synthesise0
Qualifier
IVR binds to SHE1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“This suggests that SHE is a transcription factor involved in the induction of IVR and that IVR binds to SHE1 to regulate its own synthesis.”

✓ located verbatim in the source · abstract, characters 1165–1304 · show in text ↑
t0

“Tobacco”

✓ located verbatim in the source · title, characters 138–145 · show in text ↑

transgenic · Tobacco mosaic virus · Nicotiana tabacum (tobacco)Positive and negative results

12 papers: 11 positive, 1 negative or no effect

11 in the opposite direction

  1. positive
  2. positive
  3. positive

8 papers more in this group

See all 12 papers →

loss of function · Tobacco mosaic virus · Nicotiana tabacum (tobacco)Positive and negative results

18 papers: 6 positive, 12 negative or no effect

11 papers in the same direction as this paper · 6 in the opposite direction

  1. no effect
  2. positive
  3. positive

14 papers more in this group

See all 18 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.