Paper · 2023 · Physiologia Plantarum

Wild soybean salt tolerance metabolic model: Assessment of storage protein mobilization in cotyledons and C/N balance in the hypocotyl/root axis

Yunan Hu; Mingxia Li; Yongjun Hu; et al.

7
claims
9
verbatim quotes
6
citations
2
research areas
—
Not open access

Abstract

Salt stress has become one of the main factors limiting crop yield in recent years. The post-germinative growth is most sensitive to salt stress in soybean. In this study, cultivated and wild soybeans were used for an integrated metabonomics and transcriptomics analysis to determine whether wild soybean can resist salt stress by maintaining the mobilization of stored substances in cotyledons and the balance of carbon and nitrogen in the hypocotyl/root axis (HRA). Compared with wild soybean, the growth of cultivated soybean was significantly inhibited during the post-germinative growth period under salt stress. Integrating analysis found that the breakdown products of proteins, such as glutamate, glutamic acid, aspartic acid, and asparagine, increased significantly in wild soybean cotyledons. Asparagine synthase and fumarate hydratase genes and genes encoding HSP20 family proteins were specifically upregulated. In wild soybean HRA, levels of glutamic acid, aspartic acid, asparagine, citric acid, and succinic acid increased significantly, and the glutamate decarboxylase gene and the gene encoding carbonic anhydrase in nitrogen metabolism were significantly upregulated. The metabolic model indicated that wild soybean enhanced the decomposition of stored proteins and the transport of amino acids to the HRA in cotyledons and the GABA shunt to maintain carbon and nitrogen balance in the HRA to resist salt stress. This study provided a theoretical basis for cultivating salt-tolerant soybean varieties and opened opportunities for the development of sustainable agricultural practices.

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Claims 7

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Under salt stress, growth of cultivated soybean was significantly inhibited compared with wild soybean during post-germinative growth.

Taxon
cultivated soybeanGlycine maxe0
Treatment
salt stresse0
Outcome
growthe0
Direction
significantly inhibitede0
Comparator
wild soybeane0
Setting
post-germinative growth periode0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Compared with wild soybean, the growth of cultivated soybean was significantly inhibited during the post-germinative growth period under salt stress.”

✓ located verbatim in the source · abstract, characters 468–617 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Breakdown products of proteins increased significantly in wild soybean cotyledons.

Taxon
wild soybeanGlycine sojae1
Organ / stage
cotyledonse1
Outcome
breakdown products of proteinse1
Direction
increased significantlye1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine soja
Glycine soja · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Integrating analysis found that the breakdown products of proteins, such as glutamate, glutamic acid, aspartic acid, and asparagine, increased significantly in wild soybean cotyledons.”

✓ located verbatim in the source · abstract, characters 618–802 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Asparagine synthase and fumarate hydratase genes and genes encoding HSP20 family proteins were specifically upregulated in wild soybean.

Taxon
wild soybeanGlycine sojae1
Gene
Asparagine synthase and fumarate hydratase genes and genes encoding HSP20 family proteinse2
Outcome
specifically upregulatede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine soja
Glycine soja · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Integrating analysis found that the breakdown products of proteins, such as glutamate, glutamic acid, aspartic acid, and asparagine, increased significantly in wild soybean cotyledons.”

✓ located verbatim in the source · abstract, characters 618–802 · show in text ↑
e2

“Asparagine synthase and fumarate hydratase genes and genes encoding HSP20 family proteins were specifically upregulated.”

✓ located verbatim in the source · abstract, characters 803–923 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Levels of glutamic acid, aspartic acid and asparagine increased significantly in the hypocotyl/root axis of wild soybean.

Taxon
wild soybeanGlycine sojae3
Organ / stage
HRAe3
Outcome
levels of glutamic acid, aspartic acid, asparaginee3
Direction
increased significantlye3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine soja
Glycine soja · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“In wild soybean HRA, levels of glutamic acid, aspartic acid, asparagine, citric acid, and succinic acid increased significantly”

✓ located verbatim in the source · abstract, characters 924–1051 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Levels of citric acid and succinic acid increased significantly in the hypocotyl/root axis of wild soybean.

Taxon
wild soybeanGlycine sojae3
Organ / stage
HRAe3
Outcome
citric acid, and succinic acide3
Direction
increased significantlye3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine soja
Glycine soja · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“In wild soybean HRA, levels of glutamic acid, aspartic acid, asparagine, citric acid, and succinic acid increased significantly”

✓ located verbatim in the source · abstract, characters 924–1051 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Glutamate decarboxylase gene and the gene encoding carbonic anhydrase were significantly upregulated in the hypocotyl/root axis of wild soybean.

Taxon
wild soybeanGlycine sojae3
Organ / stage
HRAe3
Gene
the glutamate decarboxylase gene and the gene encoding carbonic anhydrasee4
Outcome
significantly upregulatede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine soja
Glycine soja · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“In wild soybean HRA, levels of glutamic acid, aspartic acid, asparagine, citric acid, and succinic acid increased significantly”

✓ located verbatim in the source · abstract, characters 924–1051 · show in text ↑
e4

“and the glutamate decarboxylase gene and the gene encoding carbonic anhydrase in nitrogen metabolism were significantly upregulated.”

✓ located verbatim in the source · abstract, characters 1053–1185 · show in text ↑
Mechanismauthor interpretationoriginal resultsimulated

Claim · model-written summary

Wild soybean is modelled to enhance storage-protein decomposition and amino acid transport and use a GABA shunt to maintain carbon and nitrogen balance under salt stress.

Taxon
wild soybeanGlycine sojae5
Treatment
salt stresse5
Compound
amino acidse5
Outcome
carbon and nitrogen balancee5
Qualifier
the GABA shunte5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine soja
Glycine soja · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“The metabolic model indicated that wild soybean enhanced the decomposition of stored proteins and the transport of amino acids to the HRA in cotyledons and the GABA shunt to maintain carbon and nitrogen balance in the HRA to resist salt stress.”

✓ located verbatim in the source · abstract, characters 1186–1430 · show in text ↑

salinity · growth · Glycine max (soybean)Positive and negative results

116 papers: 6 positive, 110 negative or no effect

109 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. positive
  3. positive

112 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.