Paper · 2023 · Journal of Experimental Botany

Characterization of intracellular membrane structures derived from a massive expansion of endoplasmic reticulum (ER) membrane due to synthetic ER-membrane-resident polyproteins

Andras Sandor; Marketa Samalova; Federica Brandizzi; et al.

8
claims
15
verbatim quotes
2
citations
4
research areas
✓
Open access · cc-by

Abstract

The endoplasmic reticulum (ER) is a dynamic organelle that is amenable to major restructuring. Introduction of recombinant ER-membrane-resident proteins that form homo oligomers is a known method of inducing ER proliferation: interaction of the proteins with each other alters the local structure of the ER network, leading to the formation large aggregations of expanded ER, sometimes leading to the formation of organized smooth endoplasmic reticulum (OSER). However, these membrane structures formed by ER proliferation are poorly characterized and this hampers their potential development for plant synthetic biology. Here, we characterize a range of ER-derived membranous compartments in tobacco and show how the nature of the polyproteins introduced into the ER membrane affect the morphology of the final compartment. We show that a cytosol-facing oligomerization domain is an essential component for compartment formation. Using fluorescence recovery after photobleaching, we demonstrate that although the compartment retains a connection to the ER, a diffusional barrier exists to both the ER and the cytosol associated with the compartment. Using quantitative image analysis, we also show that the presence of the compartment does not disrupt the rest of the ER network. Moreover, we demonstrate that it is possible to recruit a heterologous, bacterial enzyme to the compartment, and for the enzyme to accumulate to high levels. Finally, transgenic Arabidopsis constitutively expressing the compartment-forming polyproteins grew and developed normally under standard conditions.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 8

Associationobservedoriginal resultmeasured

Claim · model-written summary

Polyprotein nature affected morphology of ER-derived compartments in tobacco.

Treatment
polyproteins introduced into the ER membranee0
Outcome
morphology of the final compartmente0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“we characterize a range of ER-derived membranous compartments in tobacco and show how the nature of the polyproteins introduced into the ER membrane affect the morphology of the final compartment.”

✓ located verbatim in the source · abstract, characters 628–824 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

A cytosol-facing oligomerization domain was essential for compartment formation in tobacco.

Gene
cytosol-facing oligomerization domaine0
Outcome
compartment formatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“a cytosol-facing oligomerization domain is an essential component for compartment formation.”

✓ located verbatim in the source · abstract, characters 838–930 · show in text ↑
e1

“in tobacco”

✓ located verbatim in the source · abstract, characters 690–700 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The compartment remained connected to the ER in tobacco.

Outcome
connection to the ERe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the compartment retains a connection to the ER”

✓ located verbatim in the source · abstract, characters 1010–1056 · show in text ↑
e1

“in tobacco”

✓ located verbatim in the source · abstract, characters 690–700 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A diffusional barrier existed between the compartment and both ER and cytosol in tobacco.

Outcome
diffusional barriere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“a diffusional barrier exists to both the ER and the cytosol associated with the compartment.”

✓ located verbatim in the source · abstract, characters 1058–1150 · show in text ↑
e1

“in tobacco”

✓ located verbatim in the source · abstract, characters 690–700 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

The compartment did not disrupt the rest of the ER network in tobacco.

Outcome
rest of the ER networke0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the presence of the compartment does not disrupt the rest of the ER network.”

✓ located verbatim in the source · abstract, characters 1204–1280 · show in text ↑
e1

“in tobacco”

✓ located verbatim in the source · abstract, characters 690–700 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

A heterologous bacterial enzyme could be recruited to the compartment in tobacco.

Gene
bacterial enzymee0
Outcome
recruit a heterologous, bacterial enzyme to the compartmente0

Not reportedComparatorValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“it is possible to recruit a heterologous, bacterial enzyme to the compartment”

✓ located verbatim in the source · abstract, characters 1311–1388 · show in text ↑
e1

“in tobacco”

✓ located verbatim in the source · abstract, characters 690–700 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The recruited bacterial enzyme accumulated to high levels in the compartment.

Gene
bacterial enzymee1
Outcome
enzyme to accumulate to high levelse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“for the enzyme to accumulate to high levels.”

✓ located verbatim in the source · abstract, characters 1394–1438 · show in text ↑
e1

“a heterologous, bacterial enzyme to the compartment”

✓ located verbatim in the source · abstract, characters 1337–1388 · show in text ↑
e2

“in tobacco”

✓ located verbatim in the source · abstract, characters 690–700 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Transgenic Arabidopsis expressing the compartment-forming polyproteins grew and developed normally.

Taxon
ArabidopsisArabidopsise0
Material
transgenic Arabidopsise0
Gene
compartment-forming polyproteinse0
Outcome
grew and developed normallye0
Qualifier
standard conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“transgenic Arabidopsis constitutively expressing the compartment-forming polyproteins grew and developed normally under standard conditions.”

✓ located verbatim in the source · abstract, characters 1448–1588 · show in text ↑