Paper · 2023 · Plants

Genetic Variability in Seed Longevity and Germination Traits in a Tomato MAGIC Population in Contrasting Environments

Elise Bizouerne; Joseph Ly Vu; Benoît Ly Vu; et al.

9
claims
18
verbatim quotes
29
citations
3
research areas
✓
Open access · cc-by

Abstract

The stable production of high vigorous seeds is pivotal to crop yield. Also, a high longevity is essential to avoid progressive loss of seed vigour during storage. Both seed traits are strongly influenced by the environment during seed development. Here, we investigated the impact of heat stress (HS) during fruit ripening on tomato seed lifespan during storage at moderate relative humidity, speed (t50) and homogeneity of germination, using a MAGIC population that was produced under optimal and HS conditions. A plasticity index was used to assess the extent of the impact of HS for each trait. HS reduced the average longevity and germination homogeneity by 50% within the parents and MAGIC population. However, there was a high genetic variability in the seed response to heat stress. A total of 39 QTLs were identified, including six longevity QTLs for seeds from control (3) and HS (3) conditions, and six plasticity QTLs for longevity, with only one overlapping with a longevity QTL under HS. Four out of the six longevity QTL co-located with t50 QTL, revealing hotspots for seed quality traits. Twenty-one QTLs with intervals below 3 cM were analyzed using previous transcriptome and gene network data to propose candidate genes for seed vigour and longevity traits.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat stress reduced average seed longevity by 50% in parents and the MAGIC population.

Material
parents and MAGIC populatione0
Treatment
HSe0
Outcome
average longevitye0
Direction
reducede0
Value
50%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“HS reduced the average longevity and germination homogeneity by 50% within the parents and MAGIC population”

✓ located verbatim in the source · abstract, characters 599–706 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat stress reduced germination homogeneity by 50% in parents and the MAGIC population.

Material
parents and MAGIC populatione0
Treatment
HSe0
Outcome
germination homogeneitye0
Direction
reducede0
Value
50%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“HS reduced the average longevity and germination homogeneity by 50% within the parents and MAGIC population”

✓ located verbatim in the source · abstract, characters 599–706 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Tomato seeds showed high genetic variability in response to heat stress.

Outcome
high genetic variability in the seed response to heat stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“there was a high genetic variability in the seed response to heat stress”

✓ located verbatim in the source · abstract, characters 717–789 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The study identified 39 QTLs for seed traits.

Outcome
QTLse0
Value
39 QTLse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 39 QTLs were identified”

✓ located verbatim in the source · abstract, characters 791–825 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Six longevity QTLs were identified, three each for control and heat stress seeds.

Outcome
longevity QTLse0
Value
six longevity QTLse0
Qualifier
control (3) and HS (3) conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“six longevity QTLs for seeds from control (3) and HS (3) conditions”

✓ located verbatim in the source · abstract, characters 837–904 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Six plasticity QTLs for longevity were identified.

Outcome
plasticity QTLs for longevitye0
Value
six plasticity QTLse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“six plasticity QTLs for longevity”

✓ located verbatim in the source · abstract, characters 910–943 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Only one longevity plasticity QTL overlapped a longevity QTL under heat stress.

Outcome
overlapping with a longevity QTL under HSe0
Value
onee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“with only one overlapping with a longevity QTL under HS”

✓ located verbatim in the source · abstract, characters 945–1000 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Four of six longevity QTLs co-located with t50 QTLs.

Outcome
longevity QTL co-located with t50 QTLe0
Value
Four out of the sixe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Four out of the six longevity QTL co-located with t50 QTL”

✓ located verbatim in the source · abstract, characters 1002–1059 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Twenty-one narrow QTL intervals were analyzed to propose candidate genes for seed vigour and longevity.

Outcome
candidate genes for seed vigour and longevity traitse0
Value
Twenty-one QTLse0
Qualifier
intervals below 3 cMe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Twenty-one QTLs with intervals below 3 cM were analyzed using previous transcriptome and gene network data to propose candidate genes for seed vigour and longevity traits”

✓ located verbatim in the source · abstract, characters 1105–1275 · show in text ↑
t0

“Tomato”

✓ located verbatim in the source · title, characters 66–72 · show in text ↑

heat · growth · Solanum lycopersicum (tomato)Results differ

81 papers: 26 positive, 55 negative or no effect

54 papers in the same direction as this paper · 26 in the opposite direction

  1. positive
  2. positive
  3. positive

77 papers more in this group

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heat · pest · Solanum lycopersicum (tomato)Positive and negative results

10 papers: 6 positive, 4 negative or no effect

3 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. positive
  3. positive

6 papers more in this group

See all 10 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.