Paper · 2024 · Scientific Reports

Alternative conformations of a group 4 Late Embryogenesis Abundant protein associated to its in vitro protective activity

David F. Rendón-Luna; Inti A. Arroyo-Mosso; Haydee De Luna-Valenciano; et al.

4
claims
9
verbatim quotes
13
citations
2
research areas
✓
Open access · cc-by

Abstract

Late Embryogenesis Abundant (LEA) proteins are a group of intrinsically disordered proteins implicated in plant responses to water deficit. In vitro studies revealed that LEA proteins protect reporter enzymes from inactivation during low water availability. Group 4 LEA proteins constitute a conserved protein family, displaying in vitro protective capabilities. Under water deficiency or macromolecular crowding, the N-terminal of these proteins adopts an alpha-helix conformation. This region has been identified as responsible for the protein in vitro protective activity. This study investigates whether the attainment of alpha-helix conformation and/or particular amino acid residues are required for the in vitro protective activity. The LEA4-5 protein from Arabidopsis thaliana was used to generate mutant proteins. The mutations altered conserved residues, deleted specific conserved regions, or introduced prolines to hinder alpha-helix formation. The results indicate that conserved residues are not essential for LEA4-5 protective function. Interestingly, the C-terminal region was found to contribute to this function. Moreover, alpha-helix conformation is necessary for the protective activity only when the C-terminal region is deleted. Overall, LEA4-5 shows the ability to adopt alternative functional conformations under the tested conditions. These findings shed light on the in vitro mechanisms by which LEA proteins protect against water deficit stress.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 4

Observationobservedoriginal resultmeasured

Claim · model-written summary

Conserved residues are not essential for LEA4-5 protective function.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Gene
LEA4-5e0
Outcome
LEA4-5 protective functione0
Qualifier
conserved residues are not essentiale0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The results indicate that conserved residues are not essential for LEA4-5 protective function”

✓ located verbatim in the source · abstract, characters 957–1050 · show in text ↑
e1

“The LEA4-5 protein from Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 740–784 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

The C-terminal region contributes to LEA4-5 protective function.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Gene
LEA4-5e1
Outcome
LEA4-5 protective functione2
Qualifier
C-terminal regione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the C-terminal region was found to contribute to this function”

✓ located verbatim in the source · abstract, characters 1067–1129 · show in text ↑
e1

“The LEA4-5 protein from Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 740–784 · show in text ↑
e2

“LEA4-5 protective function”

✓ located verbatim in the source · abstract, characters 1024–1050 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Alpha-helix conformation is required for protective activity only after deletion of the C-terminal region.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Gene
LEA4-5e1
Outcome
protective activitye0
Qualifier
only when the C-terminal region is deletede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“alpha-helix conformation is necessary for the protective activity only when the C-terminal region is deleted”

✓ located verbatim in the source · abstract, characters 1141–1249 · show in text ↑
e1

“The LEA4-5 protein from Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 740–784 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

LEA4-5 can adopt alternative functional conformations under the tested conditions.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Gene
LEA4-5e0
Outcome
alternative functional conformationse0
Qualifier
under the tested conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“LEA4-5 shows the ability to adopt alternative functional conformations under the tested conditions”

✓ located verbatim in the source · abstract, characters 1260–1358 · show in text ↑
e1

“The LEA4-5 protein from Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 740–784 · show in text ↑