Paper · 2024 · Plants

Improvement of Flowering Stage in Japonica Rice Variety Jiahe212 by Using CRISPR/Cas9 System

Dengmei He; Ran Zhou; Chenbo Huang; et al.

6
claims
14
verbatim quotes
2
citations
3
research areas
✓
Open access · cc-by

Abstract

The flowering period of rice significantly impacts variety adaptability and yield formation. Properly shortening the reproductive period of rice varieties can expand their ecological range without significant yield reduction. Targeted genome editing, like CRISPR/Cas9, is an ideal tool to fine-tune rice growth stages and boost yield synergistically. In this study, we developed a CRISPR/Cas9-mediated multiplex genome-editing vector containing five genes related to three traits, Hd2, Ghd7, and DTH8 (flowering-stage genes), along with the recessive rice blast resistance gene Pi21 and the aromatic gene BADH2. This vector was introduced into the high-quality japonica rice variety in Zhejiang province, Jiahe212 (JH212), resulting in 34 T0 plants with various effective mutations. Among the 17 mutant T1 lines, several displayed diverse flowering dates, but most exhibited undesirable agronomic traits. Notably, three homozygous mutant lines (JH-C15, JH-C18, and JH-C31) showed slightly earlier flowering dates without significant differences in yield-related traits compared to JH212. Through special Hyg and Cas marker selection of T2 plants, we identified seven, six, and two fragrant glutinous plants devoid of transgenic components. These single plants will serve as sib lines of JH212 and potential resources for breeding applications, including maintenance lines for indica–japonica interspecific three-line hybrid rice. In summary, our research lays the foundation for the creation of short-growth-period CMS (cytoplasmic male sterility, CMS) lines, and also provides materials and a theoretical basis for indica–japonica interspecific hybrid rice breeding with wider adaptability.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

Several of the 17 mutant T1 rice lines displayed diverse flowering dates.

Material
mutant T1 linese1
Outcome
flowering datese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Japonica Rice Variety Jiahe212”

✓ located verbatim in the source · title, characters 34–64 · show in text ↑
e1

“Among the 17 mutant T1 lines, several displayed diverse flowering dates, but most exhibited undesirable agronomic traits”

✓ located verbatim in the source · abstract, characters 783–903 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Most of the mutant T1 rice lines exhibited undesirable agronomic traits.

Material
mutant T1 linese1
Outcome
agronomic traitse1
Qualifier
undesirablee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Japonica Rice Variety Jiahe212”

✓ located verbatim in the source · title, characters 34–64 · show in text ↑
e1

“Among the 17 mutant T1 lines, several displayed diverse flowering dates, but most exhibited undesirable agronomic traits”

✓ located verbatim in the source · abstract, characters 783–903 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Three homozygous edited rice lines showed slightly earlier flowering dates than JH212.

Material
JH-C15, JH-C18, and JH-C31e2
Treatment
CRISPR/Cas9-mediated multiplex genome-editing vectore3
Outcome
flowering datese2
Direction
earliere2
Qualifier
slightlye2
Comparator
JH212e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Japonica Rice Variety Jiahe212”

✓ located verbatim in the source · title, characters 34–64 · show in text ↑
e2

“Notably, three homozygous mutant lines (JH-C15, JH-C18, and JH-C31) showed slightly earlier flowering dates without significant differences in yield-related traits compared to JH212”

✓ located verbatim in the source · abstract, characters 905–1086 · show in text ↑
e3

“we developed a CRISPR/Cas9-mediated multiplex genome-editing vector containing five genes related to three traits, Hd2, Ghd7, and DTH8 (flowering-stage genes), along with the recessive rice blast resistance gene Pi21 and the aromatic gene BADH2”

✓ located verbatim in the source · abstract, characters 366–610 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

The three homozygous edited rice lines showed no significant difference in yield-related traits from JH212.

Material
JH-C15, JH-C18, and JH-C31e2
Treatment
CRISPR/Cas9-mediated multiplex genome-editing vectore3
Outcome
yield-related traitse2
Direction
without significant differencese2
Comparator
JH212e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Japonica Rice Variety Jiahe212”

✓ located verbatim in the source · title, characters 34–64 · show in text ↑
e2

“Notably, three homozygous mutant lines (JH-C15, JH-C18, and JH-C31) showed slightly earlier flowering dates without significant differences in yield-related traits compared to JH212”

✓ located verbatim in the source · abstract, characters 905–1086 · show in text ↑
e3

“we developed a CRISPR/Cas9-mediated multiplex genome-editing vector containing five genes related to three traits, Hd2, Ghd7, and DTH8 (flowering-stage genes), along with the recessive rice blast resistance gene Pi21 and the aromatic gene BADH2”

✓ located verbatim in the source · abstract, characters 366–610 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Seven, six and two fragrant glutinous rice plants devoid of transgenic components were identified.

Outcome
fragrant glutinous plantse4
Value
seven, six, and twoe4
Qualifier
devoid of transgenic componentse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Japonica Group
Oryza sativa Japonica Group · TaxonAugustus Binu : flickr : Instagram · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Japonica Rice Variety Jiahe212”

✓ located verbatim in the source · title, characters 34–64 · show in text ↑
e4

“we identified seven, six, and two fragrant glutinous plants devoid of transgenic components”

✓ located verbatim in the source · abstract, characters 1147–1238 · show in text ↑
Method / resourceauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The selected single plants are potential breeding resources as sib lines of JH212.

Outcome
potential resources for breeding applicationse5
Comparator
JH212e5

Verbatim

t0

“Japonica Rice Variety Jiahe212”

✓ located verbatim in the source · title, characters 34–64 · show in text ↑
e5

“these single plants will serve as sib lines of JH212 and potential resources for breeding applications”

✓ located after whitespace/quote normalisation · abstract, characters 1240–1342 · show in text ↑

loss of function · phenology · Oryza sativa (rice)Positive and negative results

16 papers: 3 positive, 13 negative or no effect

2 papers in the same direction as this paper · 13 in the opposite direction

  1. no effect
  2. negative
  3. negative

12 papers more in this group

See all 16 papers →

loss of function · yield · Oryza sativa (rice)Positive and negative results

134 papers: 62 positive, 72 negative or no effect

71 papers in the same direction as this paper · 62 in the opposite direction

  1. positive
  2. positive
  3. positive

130 papers more in this group

See all 134 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.