Paper · 2024 · Functional Plant Biology

Specific physiological responses to alkaline carbonate stress in rice (Oryza sativa) seedlings: organic acid metabolism and hormone signalling

Dan Wang; Miao Xu; Teng-yuan Xu; et al.

12
claims
22
verbatim quotes
4
citations
2
research areas
—
Not open access

Abstract

In recent years, alkaline soda soil has stimulated numerous biological research on plants under carbonate stress. Here, we explored the difference in physiological regulation of rice seedlings between saline (NaCl) and alkaline carbonate (NaHCO3 and Na2 CO3 ) stress. The rice seedlings were treated with 40mM NaCl, 40mM NaHCO3 and 20mM Na2 CO3 for 2h, 12h, 24h and 36h, their physiological characteristics were determined, and organic acid biosynthesis and metabolism and hormone signalling were identified by transcriptome analysis. The results showed that alkaline stress caused greater damage to their photosynthetic and antioxidant systems and led to greater accumulation of organic acid, membrane damage, proline and soluble sugar but a decreased jasmonic acid content compared with NaCl stress. Jasmonate ZIM-Domain (JAZ), the probable indole-3-acetic acid-amido synthetase GH3s, and the protein phosphatase type 2Cs that related to the hormone signalling pathway especially changed under Na2 CO3 stress. Further, the organic acid biosynthesis and metabolism process in rice seedlings were modified by both Na2 CO3 and NaHCO3 stresses through the glycolate/glyoxylate and pyruvate metabolism pathways. Collectively, this study provides valuable evidence on carbonate-responsive genes and insights into the different molecular mechanisms of saline and alkaline stresses.

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Claims 12

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Alkaline stress caused greater photosynthetic system damage than NaCl stress.

Treatment
alkaline stresse0
Outcome
photosynthetice0
Direction
greatere0
Comparator
NaCl stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“alkaline stress caused greater damage to their photosynthetic and antioxidant systems and led to greater accumulation of organic acid, membrane damage, proline and soluble sugar but a decreased jasmonic acid content compared with NaCl stress”

✓ located verbatim in the source · abstract, characters 559–800 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Alkaline stress caused greater antioxidant system damage than NaCl stress.

Treatment
alkaline stresse0
Outcome
antioxidant systemse0
Direction
greatere0
Comparator
NaCl stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“alkaline stress caused greater damage to their photosynthetic and antioxidant systems and led to greater accumulation of organic acid, membrane damage, proline and soluble sugar but a decreased jasmonic acid content compared with NaCl stress”

✓ located verbatim in the source · abstract, characters 559–800 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Alkaline stress led to greater organic acid accumulation than NaCl stress.

Treatment
alkaline stresse0
Outcome
accumulation of organic acide0
Direction
greatere0
Comparator
NaCl stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“alkaline stress caused greater damage to their photosynthetic and antioxidant systems and led to greater accumulation of organic acid, membrane damage, proline and soluble sugar but a decreased jasmonic acid content compared with NaCl stress”

✓ located verbatim in the source · abstract, characters 559–800 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Alkaline stress caused greater membrane damage than NaCl stress.

Treatment
alkaline stresse0
Outcome
membrane damagee0
Direction
greatere0
Comparator
NaCl stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“alkaline stress caused greater damage to their photosynthetic and antioxidant systems and led to greater accumulation of organic acid, membrane damage, proline and soluble sugar but a decreased jasmonic acid content compared with NaCl stress”

✓ located verbatim in the source · abstract, characters 559–800 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Alkaline stress led to greater proline accumulation than NaCl stress.

Treatment
alkaline stresse0
Outcome
prolinee0
Direction
greatere0
Comparator
NaCl stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“alkaline stress caused greater damage to their photosynthetic and antioxidant systems and led to greater accumulation of organic acid, membrane damage, proline and soluble sugar but a decreased jasmonic acid content compared with NaCl stress”

✓ located verbatim in the source · abstract, characters 559–800 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Alkaline stress led to greater soluble sugar accumulation than NaCl stress.

Treatment
alkaline stresse0
Outcome
soluble sugare0
Direction
greatere0
Comparator
NaCl stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“alkaline stress caused greater damage to their photosynthetic and antioxidant systems and led to greater accumulation of organic acid, membrane damage, proline and soluble sugar but a decreased jasmonic acid content compared with NaCl stress”

✓ located verbatim in the source · abstract, characters 559–800 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Alkaline stress decreased jasmonic acid content relative to NaCl stress.

Treatment
alkaline stresse0
Outcome
jasmonic acid contente0
Direction
decreasede0
Comparator
NaCl stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“alkaline stress caused greater damage to their photosynthetic and antioxidant systems and led to greater accumulation of organic acid, membrane damage, proline and soluble sugar but a decreased jasmonic acid content compared with NaCl stress”

✓ located verbatim in the source · abstract, characters 559–800 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

JAZ changed especially under Na2 CO3 stress.

Treatment
Na2 CO3 stresse0
Gene
Jasmonate ZIM-Domain (JAZ)e0
Outcome
especially changede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Jasmonate ZIM-Domain (JAZ), the probable indole-3-acetic acid-amido synthetase GH3s, and the protein phosphatase type 2Cs that related to the hormone signalling pathway especially changed under Na2 CO3 stress”

✓ located verbatim in the source · abstract, characters 802–1010 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GH3s changed especially under Na2 CO3 stress.

Treatment
Na2 CO3 stresse0
Gene
the probable indole-3-acetic acid-amido synthetase GH3se0
Outcome
especially changede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Jasmonate ZIM-Domain (JAZ), the probable indole-3-acetic acid-amido synthetase GH3s, and the protein phosphatase type 2Cs that related to the hormone signalling pathway especially changed under Na2 CO3 stress”

✓ located verbatim in the source · abstract, characters 802–1010 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Protein phosphatase type 2Cs changed especially under Na2 CO3 stress.

Treatment
Na2 CO3 stresse0
Gene
protein phosphatase type 2Cse0
Outcome
especially changede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Jasmonate ZIM-Domain (JAZ), the probable indole-3-acetic acid-amido synthetase GH3s, and the protein phosphatase type 2Cs that related to the hormone signalling pathway especially changed under Na2 CO3 stress”

✓ located verbatim in the source · abstract, characters 802–1010 · show in text ↑
t0

“rice (Oryza sativa) seedlings”

✓ located verbatim in the source · title, characters 65–94 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Na2 CO3 stress modified organic acid biosynthesis and metabolism via glycolate/glyoxylate and pyruvate pathways.

Treatment
Na2 CO3e0
Outcome
organic acid biosynthesis and metabolism processe0
Qualifier
glycolate/glyoxylate and pyruvate metabolism pathwayse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the organic acid biosynthesis and metabolism process in rice seedlings were modified by both Na2 CO3 and NaHCO3 stresses through the glycolate/glyoxylate and pyruvate metabolism pathways”

✓ located verbatim in the source · abstract, characters 1021–1207 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

NaHCO3 stress modified organic acid biosynthesis and metabolism via glycolate/glyoxylate and pyruvate pathways.

Treatment
NaHCO3e0
Outcome
organic acid biosynthesis and metabolism processe0
Qualifier
glycolate/glyoxylate and pyruvate metabolism pathwayse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the organic acid biosynthesis and metabolism process in rice seedlings were modified by both Na2 CO3 and NaHCO3 stresses through the glycolate/glyoxylate and pyruvate metabolism pathways”

✓ located verbatim in the source · abstract, characters 1021–1207 · show in text ↑

alkalinity · physiology: oxidative · Oryza sativa (rice)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

1 paper in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. negative
  3. positive

1 paper more in this group

See all 5 papers →

alkalinity · molecular: metabolites · Oryza sativa (rice)Positive and negative results

8 papers: 3 positive, 5 negative or no effect

4 papers in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. positive
  3. positive

4 papers more in this group

See all 8 papers →

alkalinity · physiology: photosynthesis · Oryza sativa (rice)Results agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. negative
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.