Paper · 2024 · Agronomy

Nodules of Medicago spp. Host a Diverse Community of Rhizobial Species in Natural Ecosystems

Andrei Stefan; Jannick Van Cauwenberghe; Craita Maria Rosu; et al.

9
claims
12
verbatim quotes
3
citations
3
research areas
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Open access · cc-by

Abstract

Biological nitrogen fixation by rhizobia-nodulated legumes reduces the dependence on synthetic nitrogen fertilizers. Identification of locally adapted rhizobia may uncover economically valuable strains for sustainable agriculture. This study investigated the diversity and symbiotic potential of rhizobia associated with three Medicago species from Eastern Romania’s ecosystems. Phenotypic screening ensured that only rhizobial species were retained for molecular characterization. 16S rDNA sequencing clustered the isolates into four distinct groups: Sinorhizobium meliloti, Sinorhizobium medicae, Rhizobium leguminosarum, and Mesorhizobium spp. The chromosomal genes (atpD, glnII, recA) and nifH phylogenies were congruent, while the nodA phylogeny grouped the Mesorhizobium spp. isolates with R. leguminosarum. Medicago sativa was the most sampled plant species, and only S. meliloti and R. leguminosarum were found in its nodules, while Medicago falcata nodules hosted S. meliloti and Mesorhizobium spp. Medicago lupulina was the only species that hosted all four identified rhizobial groups, including S. medicae. This study provides the first report on the Mesorhizobium spp. associated with M. falcata nodules. Additionally, R. leguminosarum and two Mesorhizobium genospecies were identified as novel symbionts for Medicago spp. Comparative analysis of Medicago-associated rhizobia from other studies revealed that differences in 16S rDNA sequence type composition were influenced by Medicago species identity rather than geographic region.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

16S rDNA sequencing clustered the rhizobial isolates into four distinct groups.

Taxon
Medicago spp.Medicagot0
Interactor
Sinorhizobium melilotiSinorhizobium melilotie1symbiont
Second interactor
Mesorhizobium spp.Mesorhizobiume1symbiont
Outcome
four distinct groupse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago
Medicago · Taxon · picture of the genus (one of its species)Ivar Leidus · CC BY-SA 3.0 · Wikimedia Commons ↗
Sinorhizobium meliloti
Sinorhizobium meliloti · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗
Mesorhizobium
Mesorhizobium · Second interactor · picture of the genus (one of its species)Ninjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nodules of Medicago spp.”

✓ located verbatim in the source · title, characters 0–24 · show in text ↑
e1

“16S rDNA sequencing clustered the isolates into four distinct groups: Sinorhizobium meliloti, Sinorhizobium medicae, Rhizobium leguminosarum, and Mesorhizobium spp.”

✓ located verbatim in the source · abstract, characters 482–646 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Medicago sativa nodules contained only S. meliloti and R. leguminosarum.

Taxon
Medicago sativaMedicago sativae2
Interactor
S. melilotiSinorhizobium melilotie2symbiont
Second interactor
R. leguminosarumRhizobium leguminosarume2symbiont
Outcome
found in its nodulese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗
Sinorhizobium meliloti
Sinorhizobium meliloti · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗
Rhizobium leguminosarum
Rhizobium leguminosarum · Second interactor · picture from its Wikimedia Commons categoryQaswarah 21 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e2

“Medicago sativa was the most sampled plant species, and only S. meliloti and R. leguminosarum were found in its nodules”

✓ located verbatim in the source · abstract, characters 814–933 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Medicago falcata nodules hosted S. meliloti and Mesorhizobium spp.

Interactor
S. melilotiSinorhizobium melilotie3symbiont
Second interactor
Mesorhizobium spp.Mesorhizobiume3symbiont
Outcome
nodules hostede3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa subsp. falcata
Medicago sativa subsp. falcata · TaxonNo machine-readable author provided. Bogdan assumed (based on copyright claims). · CC BY-SA 3.0 · Wikimedia Commons ↗
Sinorhizobium meliloti
Sinorhizobium meliloti · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗
Mesorhizobium
Mesorhizobium · Second interactor · picture of the genus (one of its species)Ninjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“while Medicago falcata nodules hosted S. meliloti and Mesorhizobium spp.”

✓ located verbatim in the source · abstract, characters 935–1007 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Medicago lupulina was the only species whose nodules hosted all four rhizobial groups, including S. medicae.

Taxon
Medicago lupulinaMedicago lupulinae4
Interactor
S. medicaeSinorhizobium medicaee4symbiont
Outcome
hosted all four identified rhizobial groupse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago lupulina
Medicago lupulina · TaxonAnRo0002 · CC0 · Wikimedia Commons ↗
Sinorhizobium medicae
Sinorhizobium medicae · Interactor · picture from its Wikimedia Commons categoryNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“Medicago lupulina was the only species that hosted all four identified rhizobial groups, including S. medicae”

✓ located verbatim in the source · abstract, characters 1008–1117 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

This study is the first report of Mesorhizobium spp. associated with M. falcata nodules.

Interactor
Mesorhizobium spp.Mesorhizobiume5symbiont
Outcome
first reporte5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa subsp. falcata
Medicago sativa subsp. falcata · TaxonNo machine-readable author provided. Bogdan assumed (based on copyright claims). · CC BY-SA 3.0 · Wikimedia Commons ↗
Mesorhizobium
Mesorhizobium · Interactor · picture of the genus (one of its species)Ninjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“This study provides the first report on the Mesorhizobium spp. associated with M. falcata nodules”

✓ located verbatim in the source · abstract, characters 1119–1216 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

R. leguminosarum and two Mesorhizobium genospecies were identified as novel symbionts of Medicago spp.

Taxon
Medicago spp.Medicagoe6
Interactor
R. leguminosarumRhizobium leguminosarume6symbiont
Second interactor
Mesorhizobium genospeciese6symbiont
Outcome
novel symbiontse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago
Medicago · Taxon · picture of the genus (one of its species)Ivar Leidus · CC BY-SA 3.0 · Wikimedia Commons ↗
Rhizobium leguminosarum
Rhizobium leguminosarum · Interactor · picture from its Wikimedia Commons categoryQaswarah 21 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e6

“R. leguminosarum and two Mesorhizobium genospecies were identified as novel symbionts for Medicago spp.”

✓ located verbatim in the source · abstract, characters 1232–1335 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Differences in 16S rDNA sequence type composition were associated with Medicago species identity rather than geographic region.

Taxon
Medicago speciesMedicagoe7
Outcome
16S rDNA sequence type compositione7
Comparator
geographic regione7

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago
Medicago · Taxon · picture of the genus (one of its species)Ivar Leidus · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e7

“differences in 16S rDNA sequence type composition were influenced by Medicago species identity rather than geographic region”

✓ located verbatim in the source · abstract, characters 1422–1546 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phylogenies of the chromosomal genes atpD, glnII and recA and of nifH were congruent.

Taxon
Medicago spp.Medicagot0
Gene
atpD, glnII, recAe0
Outcome
phylogenies were congruente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago
Medicago · Taxon · picture of the genus (one of its species)Ivar Leidus · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Nodules of Medicago spp.”

✓ located verbatim in the source · title, characters 0–24 · show in text ↑
e0

“The chromosomal genes (atpD, glnII, recA) and nifH phylogenies were congruent, while the nodA phylogeny grouped the Mesorhizobium spp. isolates with R. leguminosarum”

✓ located verbatim in the source · abstract, characters 647–812 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The nodA phylogeny grouped Mesorhizobium spp. isolates with R. leguminosarum.

Taxon
Medicago spp.Medicagot0
Interactor
Mesorhizobium spp.Mesorhizobiume0symbiont
Second interactor
R. leguminosarumRhizobium leguminosarume0symbiont
Gene
nodAe0
Outcome
grouped the Mesorhizobium spp. isolates with R. leguminosarume0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago
Medicago · Taxon · picture of the genus (one of its species)Ivar Leidus · CC BY-SA 3.0 · Wikimedia Commons ↗
Mesorhizobium
Mesorhizobium · Interactor · picture of the genus (one of its species)Ninjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗
Rhizobium leguminosarum
Rhizobium leguminosarum · Second interactor · picture from its Wikimedia Commons categoryQaswarah 21 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Nodules of Medicago spp.”

✓ located verbatim in the source · title, characters 0–24 · show in text ↑
e0

“The chromosomal genes (atpD, glnII, recA) and nifH phylogenies were congruent, while the nodA phylogeny grouped the Mesorhizobium spp. isolates with R. leguminosarum”

✓ located verbatim in the source · abstract, characters 647–812 · show in text ↑