Paper · 2024 · Horticulturae

Altered Photoprotective Mechanisms and Pigment Synthesis in Torreya grandis with Leaf Color Mutations: An Integrated Transcriptome and Photosynthesis Analysis

Yujia Chen; Lei Wang; Jing Zhang; et al.

14
claims
30
verbatim quotes
5
citations
2
research areas
✓
Open access · cc-by

Abstract

Torreya grandis is a widely cultivated fruit species in China that is valued for its significant economic and agricultural importance. The molecular mechanisms underlying pigment formation and photosynthetic performance in Torreya leaf color mutants remain to be fully elucidated. In this study, we performed transcriptome sequencing and measured photosynthetic performance indicators to compare mutant and normal green leaves. The research results indicate that the identified Torreya mutant differs from previously reported mutants, exhibiting a weakened photoprotection mechanism and a significant reduction in carotenoid content of approximately 33%. Photosynthetic indicators, including the potential maximum photosynthetic capacity (Fv/Fm) and electron transport efficiency (Ψo, φEo), decreased significantly by 32%, 52%, and 49%, respectively. While the quantum yield for energy dissipation (φDo) increased by 31%, this increase was not statistically significant, which may further reduce PSII activity. A transcriptome analysis revealed that the up-regulation of chlorophyll degradation-related genes—HCAR and NOL—accelerates chlorophyll breakdown in the Torreya mutant. The down-regulation of carotenoid biosynthesis genes, such as LCY1 and ZEP, is strongly associated with compromised photoprotective mechanisms and the reduced stability of Photosystem II. Additionally, the reduced expression of the photoprotective gene psbS weakened the mutant’s tolerance to photoinhibition, increasing its susceptibility to photodamage. These changes in gene expression accelerate chlorophyll degradation and reduce carotenoid synthesis, which may be the primary cause of the yellowing in Torreya. Meanwhile, the weakening of photoprotective mechanisms further impairs photosynthetic efficiency, limiting the growth and adaptability of the mutants. This study emphasizes the crucial roles of photosynthetic pigments and photosystem structures in regulating the yellowing phenotype and the environmental adaptability of Torreya. It also provides important insights into the genetic regulation of leaf color in relation to photosynthesis and breeding.

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Claims 14

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The identified Torreya mutant differs from previously reported mutants and shows a weakened photoprotection mechanism.

Taxon
TorreyaTorreyae1
Outcome
photoprotection mechanisme1
Direction
weakenede1
Comparator
previously reported mutantse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya
Torreya · Taxon · picture of the genus (one of its species)Crusier · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e1

“the identified Torreya mutant differs from previously reported mutants, exhibiting a weakened photoprotection mechanism”

✓ located verbatim in the source · abstract, characters 463–582 · show in text ↑
Observationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Carotenoid content of the Torreya leaf color mutant was significantly reduced by approximately 33% relative to normal green leaves.

Taxon
TorreyaTorreyae1
Material
Torreya mutante1
Organ / stage
green leavese2
Outcome
carotenoid contente1
Direction
reductione1
Value
approximately 33%e1
Comparator
normal green leavese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya
Torreya · Taxon · picture of the genus (one of its species)Crusier · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e1

“the identified Torreya mutant differs from previously reported mutants, exhibiting a weakened photoprotection mechanism and a significant reduction in carotenoid content of approximately 33%”

✓ located verbatim in the source · abstract, characters 463–653 · show in text ↑
e2

“to compare mutant and normal green leaves”

✓ located verbatim in the source · abstract, characters 385–426 · show in text ↑
Observationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Potential maximum photosynthetic capacity (Fv/Fm) decreased significantly by 32% in the Torreya grandis leaf color mutant relative to normal green leaves.

Taxon
Torreya grandisTorreya grandist0
Outcome
potential maximum photosynthetic capacity (Fv/Fm)e3
Direction
decreasede3
Value
32%e3
Comparator
normal green leavese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e2

“to compare mutant and normal green leaves”

✓ located verbatim in the source · abstract, characters 385–426 · show in text ↑
e3

“the potential maximum photosynthetic capacity (Fv/Fm) and electron transport efficiency (Ψo, φEo), decreased significantly by 32%, 52%, and 49%, respectively”

✓ located verbatim in the source · abstract, characters 692–849 · show in text ↑
Observationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Electron transport efficiency (Ψo) decreased significantly by 52% in the Torreya grandis leaf color mutant relative to normal green leaves.

Taxon
Torreya grandisTorreya grandist0
Outcome
electron transport efficiencye3
Direction
decreasede3
Value
52%e3
Comparator
normal green leavese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e2

“to compare mutant and normal green leaves”

✓ located verbatim in the source · abstract, characters 385–426 · show in text ↑
e3

“the potential maximum photosynthetic capacity (Fv/Fm) and electron transport efficiency (Ψo, φEo), decreased significantly by 32%, 52%, and 49%, respectively”

✓ located verbatim in the source · abstract, characters 692–849 · show in text ↑
Observationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Electron transport efficiency (φEo) decreased significantly by 49% in the Torreya grandis leaf color mutant relative to normal green leaves.

Taxon
Torreya grandisTorreya grandist0
Outcome
electron transport efficiencye3
Direction
decreasede3
Value
49%e3
Comparator
normal green leavese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e2

“to compare mutant and normal green leaves”

✓ located verbatim in the source · abstract, characters 385–426 · show in text ↑
e3

“the potential maximum photosynthetic capacity (Fv/Fm) and electron transport efficiency (Ψo, φEo), decreased significantly by 32%, 52%, and 49%, respectively”

✓ located verbatim in the source · abstract, characters 692–849 · show in text ↑
Observationobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Quantum yield for energy dissipation (φDo) rose by 31% in the mutant, but this increase was not statistically significant.

Taxon
Torreya grandisTorreya grandist0
Outcome
quantum yield for energy dissipatione4
Direction
increasede4
Value
31%e4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e4

“While the quantum yield for energy dissipation (φDo) increased by 31%, this increase was not statistically significant”

✓ located verbatim in the source · abstract, characters 851–969 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Chlorophyll degradation-related genes HCAR and NOL are up-regulated in the Torreya mutant.

Taxon
TorreyaTorreyae5
Gene
HCAR and NOLe5
Outcome
chlorophyll degradation-related genese5
Direction
up-regulatione5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya
Torreya · Taxon · picture of the genus (one of its species)Crusier · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e5

“the up-regulation of chlorophyll degradation-related genes—HCAR and NOL—accelerates chlorophyll breakdown in the Torreya mutant”

✓ located verbatim in the source · abstract, characters 1050–1177 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Up-regulation of HCAR and NOL is asserted to accelerate chlorophyll breakdown in the Torreya mutant.

Taxon
TorreyaTorreyae5
Gene
HCAR and NOLe5
Outcome
chlorophyll breakdowne5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya
Torreya · Taxon · picture of the genus (one of its species)Crusier · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e5

“the up-regulation of chlorophyll degradation-related genes—HCAR and NOL—accelerates chlorophyll breakdown in the Torreya mutant”

✓ located verbatim in the source · abstract, characters 1050–1177 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Carotenoid biosynthesis genes LCY1 and ZEP are down-regulated in the Torreya mutant.

Taxon
Torreya grandisTorreya grandist0
Gene
LCY1 and ZEPe6
Outcome
carotenoid biosynthesis genese6
Direction
down-regulatione6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e6

“The down-regulation of carotenoid biosynthesis genes, such as LCY1 and ZEP, is strongly associated with compromised photoprotective mechanisms and the reduced stability of Photosystem II”

✓ located verbatim in the source · abstract, characters 1179–1365 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Down-regulation of LCY1 and ZEP is strongly associated with compromised photoprotective mechanisms and reduced stability of Photosystem II.

Taxon
Torreya grandisTorreya grandist0
Gene
LCY1 and ZEPe6
Outcome
photoprotective mechanismse6
Qualifier
reduced stability of Photosystem IIe6

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e6

“The down-regulation of carotenoid biosynthesis genes, such as LCY1 and ZEP, is strongly associated with compromised photoprotective mechanisms and the reduced stability of Photosystem II”

✓ located verbatim in the source · abstract, characters 1179–1365 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Reduced expression of the photoprotective gene psbS in the Torreya mutant.

Taxon
Torreya grandisTorreya grandist0
Gene
psbSe7
Outcome
expressione7
Direction
reducede7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e7

“the reduced expression of the photoprotective gene psbS weakened the mutant’s tolerance to photoinhibition, increasing its susceptibility to photodamage”

✓ located verbatim in the source · abstract, characters 1381–1533 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Reduced psbS expression is asserted to weaken the mutant tolerance to photoinhibition, increasing its susceptibility to photodamage.

Taxon
Torreya grandisTorreya grandist0
Gene
psbSe7
Outcome
tolerance to photoinhibitione7
Qualifier
increasing its susceptibility to photodamagee7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e7

“the reduced expression of the photoprotective gene psbS weakened the mutant’s tolerance to photoinhibition, increasing its susceptibility to photodamage”

✓ located verbatim in the source · abstract, characters 1381–1533 · show in text ↑
Mechanismhypothesisoriginal resultnegativemeasured

Claim · model-written summary

Changes in gene expression may be the primary cause of the yellowing in Torreya.

Taxon
TorreyaTorreyae1
Outcome
yellowinge1
Qualifier
changes in gene expressione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya
Torreya · Taxon · picture of the genus (one of its species)Crusier · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e1

“These changes in gene expression accelerate chlorophyll degradation and reduce carotenoid synthesis, which may be the primary cause of the yellowing in Torreya”

✓ located verbatim in the source · abstract, characters 1535–1694 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Weakened photoprotection is asserted to further impair photosynthetic efficiency and limit the growth and adaptability of the mutants.

Taxon
Torreya grandisTorreya grandist0
Outcome
growth and adaptabilitye1
Qualifier
the weakening of photoprotective mechanisms further impairs photosynthetic efficiencye1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Torreya grandis
Torreya grandis · TaxonFumikas Sagisavas · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Torreya grandis with Leaf Color Mutations”

✓ located verbatim in the source · title, characters 60–101 · show in text ↑
e1

“the weakening of photoprotective mechanisms further impairs photosynthetic efficiency, limiting the growth and adaptability of the mutants”

✓ located verbatim in the source · abstract, characters 1707–1845 · show in text ↑