Paper · 2025 · Horticulturae

Genome-Wide Characterization of the ABA Receptor Pyrabactin Resistance 1-like (PYL) Gene Family in Strawberry and Functional Assessment of FaPYL3 and FaPYL4 in Fruit Ripening

Sizhen Jia; Bei Lu; Yuanhua Wang; et al.

8
claims
11
verbatim quotes
3
citations
2
research areas
✓
Open access · cc-by

Abstract

The ABA receptor pyrabactin resistance 1-like (PYR/PYL) protein family is among the key regulators of plant growth and development, participating in ABA signaling. However, information on this family in strawberry (Fragaria × ananassa), an important fleshy fruit crop worldwide, is limited. In the present work, seven homologs of Arabidopsis PYL were first identified and characterized from Fragaria × ananassa. Furthermore, a comprehensive analysis of the FaPYLs was performed, including their phylogenetic relationships, gene structures, chromosomal locations, and conserved domains. The qRT–PCR analysis showed that FaPYL genes had differential expression patterns between fruit ripening stages, and most of them were transcribed in the SG (small green fruits,) and Wh (white fruits) stages of fruit ripening. Treatment of strawberry fruits with ABA and JA changed the expression of all FaPYLs in a gene-specific manner, depending on the berry ripening stage; at the turning stage, only the expression levels of FaPYL3 and FaPYL4 increased in response to ABA. Promoter analysis showed that most FaPYL genes contain cis-acting elements that respond to stress, light, and phytohormones and are associated with tissue-specific expression. Additionally, FaPYL3 and FaPYL4 were further functionally characterized using transient expression technology. Overexpression of FaPYL3 and FaPYL4 promoted strawberry fruit ripening, which positively regulated FaSnRK2.2 and FaNCED1 transcripts. Our results highlight the great potential of FaPYL genes in breeding genetically modified strawberry varieties with accelerated fruit ripening.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Seven Arabidopsis PYL homologs were identified in strawberry.

Taxon
Fragaria × ananassaFragaria ×ananassae0
Gene
Arabidopsis PYLe0
Outcome
homologs of Arabidopsis PYLe0
Value
seven homologse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“seven homologs of Arabidopsis PYL were first identified and characterized from Fragaria × ananassa”

✓ located verbatim in the source · abstract, characters 312–410 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

FaPYL expression differed among strawberry fruit ripening stages, with most transcribed at SG and Wh stages.

Taxon
strawberryFragaria ×ananassat0
Organ / stage
fruit ripening stagese0
Gene
FaPYL genese0
Outcome
differential expression patternse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“FaPYL genes had differential expression patterns between fruit ripening stages, and most of them were transcribed in the SG (small green fruits,) and Wh (white fruits) stages of fruit ripening”

✓ located verbatim in the source · abstract, characters 619–811 · show in text ↑
t0

“Strawberry”

✓ located verbatim in the source · title, characters 99–109 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ABA and JA treatments changed FaPYL expression according to gene and ripening stage.

Taxon
strawberryFragaria ×ananassae0
Treatment
ABA and JAe0
Gene
FaPYLse0
Outcome
expression of all FaPYLse0
Direction
changede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Treatment of strawberry fruits with ABA and JA changed the expression of all FaPYLs in a gene-specific manner, depending on the berry ripening stage”

✓ located verbatim in the source · abstract, characters 813–961 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

At the turning stage, ABA increased only FaPYL3 and FaPYL4 expression.

Taxon
strawberryFragaria ×ananassat0
Organ / stage
turning stagee0
Treatment
ABAe0
Gene
FaPYL3 and FaPYL4e0
Outcome
expression levels of FaPYL3 and FaPYL4e0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“at the turning stage, only the expression levels of FaPYL3 and FaPYL4 increased in response to ABA”

✓ located verbatim in the source · abstract, characters 963–1061 · show in text ↑
t0

“Strawberry”

✓ located verbatim in the source · title, characters 99–109 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Most FaPYL genes contained cis-acting elements responsive to stress, light and phytohormones and associated with tissue-specific expression.

Taxon
strawberryFragaria ×ananassat0
Gene
FaPYL genese0
Outcome
cis-acting elementse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“most FaPYL genes contain cis-acting elements that respond to stress, light, and phytohormones and are associated with tissue-specific expression”

✓ located verbatim in the source · abstract, characters 1093–1237 · show in text ↑
t0

“Strawberry”

✓ located verbatim in the source · title, characters 99–109 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

FaPYL3 overexpression promoted strawberry fruit ripening.

Taxon
strawberryFragaria ×ananassae0
Treatment
Overexpression of FaPYL3e0
Gene
FaPYL3e0
Outcome
fruit ripeninge0
Direction
promotede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of FaPYL3 and FaPYL4 promoted strawberry fruit ripening, which positively regulated FaSnRK2.2 and FaNCED1 transcripts”

✓ located verbatim in the source · abstract, characters 1350–1482 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

FaPYL4 overexpression promoted strawberry fruit ripening.

Taxon
strawberryFragaria ×ananassae0
Treatment
FaPYL4e0
Gene
FaPYL4e0
Outcome
fruit ripeninge0
Direction
promotede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of FaPYL3 and FaPYL4 promoted strawberry fruit ripening, which positively regulated FaSnRK2.2 and FaNCED1 transcripts”

✓ located verbatim in the source · abstract, characters 1350–1482 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

FaPYL3 and FaPYL4 overexpression positively regulated FaSnRK2.2 and FaNCED1 transcripts.

Taxon
strawberryFragaria ×ananassae0
Treatment
Overexpression of FaPYL3 and FaPYL4e0
Gene
FaSnRK2.2 and FaNCED1e0
Outcome
FaSnRK2.2 and FaNCED1 transcriptse0
Direction
positively regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of FaPYL3 and FaPYL4 promoted strawberry fruit ripening, which positively regulated FaSnRK2.2 and FaNCED1 transcripts”

✓ located verbatim in the source · abstract, characters 1350–1482 · show in text ↑

(+)-abscisic acid · molecular: expression · Fragaria x ananassa (strawberry)Positive and negative results

10 papers: 8 positive, 2 negative or no effect

7 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

6 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.