Paper · 2015 · New Phytologist

Central role of FaGAMYB in the transition of the strawberry receptacle from development to ripening

José G. Vallarino; Sonia Osorio; Aureliano Bombarely; et al.

7
claims
14
verbatim quotes
79
citations
3
research areas
✓
Open access

Abstract

The receptacle of the strawberry (Fragaria × ananassa) fruit accounts for the main properties of the ripe fruit for human consumption. As it ripens, it undergoes changes similar to other fruits in sugar : acid ratio, volatile production and cell wall softening. However, the main regulators of this process have not yet been reported. The white stage marks the initiation of the ripening process, and we had previously reported a peak of expression for a FaGAMYB gene. Transient silencing of FaGAMYB using RNAi and further determination of changes in global gene expression by RNAseq, and composition of primary and secondary metabolites have been used to investigate the role played by this gene during the development of the receptacle. Down-regulation of FaGAMYB caused an arrest in the ripening of the receptacle and inhibited colour formation. Consistent with this, several transcription factors associated with the regulation of flavonoid biosynthetic pathway showed altered expression. FaGAMYB silencing also caused a reduction of ABA biosynthesis and sucrose content. Interestingly, exogenous ABA application to the RNAI-transformed receptacle reversed most defects caused by FaGAMYB down-regulation. The study assigns a key regulatory role to FaGAMYB in the initiation of strawberry receptacle ripening and acting upstream of the known regulator ABA.

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Claims 7

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

FaGAMYB down-regulation arrested strawberry receptacle ripening.

Taxon
strawberryFragaria ×ananassae1
Treatment
Down-regulation of FaGAMYBe0
Gene
FaGAMYBe0
Outcome
ripening of the receptaclee0
Direction
arreste0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Down-regulation of FaGAMYB caused an arrest in the ripening of the receptacle”

✓ located verbatim in the source · abstract, characters 739–816 · show in text ↑
e1

“the strawberry (Fragaria × ananassa) fruit”

✓ located verbatim in the source · abstract, characters 18–60 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

FaGAMYB down-regulation inhibited color formation in strawberry receptacles.

Taxon
strawberryFragaria ×ananassae1
Treatment
Down-regulation of FaGAMYBe0
Gene
FaGAMYBe0
Outcome
colour formatione0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Down-regulation of FaGAMYB caused an arrest in the ripening of the receptacle and inhibited colour formation.”

✓ located verbatim in the source · abstract, characters 739–848 · show in text ↑
e1

“the strawberry (Fragaria × ananassa) fruit”

✓ located verbatim in the source · abstract, characters 18–60 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Flavonoid-pathway transcription factors showed altered expression after FaGAMYB silencing.

Taxon
strawberryFragaria ×ananassae2
Treatment
FaGAMYB silencinge1
Gene
transcription factorse0
Outcome
altered expressione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“several transcription factors associated with the regulation of flavonoid biosynthetic pathway showed altered expression.”

✓ located verbatim in the source · abstract, characters 871–992 · show in text ↑
e1

“FaGAMYB silencing”

✓ located verbatim in the source · abstract, characters 993–1010 · show in text ↑
e2

“the strawberry (Fragaria × ananassa) fruit”

✓ located verbatim in the source · abstract, characters 18–60 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

FaGAMYB silencing reduced ABA biosynthesis in strawberry receptacles.

Taxon
strawberryFragaria ×ananassae1
Treatment
FaGAMYB silencinge0
Gene
FaGAMYBe0
Outcome
ABA biosynthesise0
Direction
reductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“FaGAMYB silencing also caused a reduction of ABA biosynthesis and sucrose content.”

✓ located verbatim in the source · abstract, characters 993–1075 · show in text ↑
e1

“the strawberry (Fragaria × ananassa) fruit”

✓ located verbatim in the source · abstract, characters 18–60 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

FaGAMYB silencing reduced sucrose content in strawberry receptacles.

Taxon
strawberryFragaria ×ananassae1
Treatment
FaGAMYB silencinge0
Gene
FaGAMYBe0
Outcome
sucrose contente0
Direction
reductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“FaGAMYB silencing also caused a reduction of ABA biosynthesis and sucrose content.”

✓ located verbatim in the source · abstract, characters 993–1075 · show in text ↑
e1

“the strawberry (Fragaria × ananassa) fruit”

✓ located verbatim in the source · abstract, characters 18–60 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Exogenous ABA reversed most defects caused by FaGAMYB down-regulation in strawberry receptacles.

Taxon
strawberryFragaria ×ananassae1
Treatment
exogenous ABA applicatione0
Gene
FaGAMYBe0
Outcome
defects caused by FaGAMYB down-regulatione0
Direction
reversede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“exogenous ABA application to the RNAI-transformed receptacle reversed most defects caused by FaGAMYB down-regulation.”

✓ located verbatim in the source · abstract, characters 1091–1208 · show in text ↑
e1

“the strawberry (Fragaria × ananassa) fruit”

✓ located verbatim in the source · abstract, characters 18–60 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors place FaGAMYB upstream of ABA in initiating strawberry receptacle ripening.

Taxon
strawberryFragaria ×ananassae0
Gene
FaGAMYBe0
Compound
ABAe0
Outcome
initiation of strawberry receptacle ripeninge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The study assigns a key regulatory role to FaGAMYB in the initiation of strawberry receptacle ripening and acting upstream of the known regulator ABA.”

✓ located verbatim in the source · abstract, characters 1209–1359 · show in text ↑

(+)-abscisic acid · molecular: expression · Fragaria x ananassa (strawberry)Positive and negative results

10 papers: 8 positive, 2 negative or no effect

7 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

6 papers more in this group

See all 10 papers →

loss of function · molecular: metabolites · Fragaria x ananassa (strawberry)Positive and negative results

6 papers: 3 positive, 3 negative or no effect

2 papers in the same direction as this paper · 3 in the opposite direction

  1. negative
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

loss of function · quality: postharvest · Fragaria x ananassa (strawberry)Positive and negative results

22 papers: 11 positive, 11 negative or no effect

10 papers in the same direction as this paper · 11 in the opposite direction

  1. negative
  2. negative
  3. negative

18 papers more in this group

See all 22 papers →

loss of function · quality: sugar starch · Fragaria x ananassa (strawberry)Results agree

3 papers: 0 positive, 3 negative or no effect

2 papers in the same direction as this paper

  1. negative
  2. no effect
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.