Paper · 2025 · Scientific Reports

Transcriptional corepressor OsTPR1 regulates tillering and lateral root development in rice

Yi Hsuan Hou; Chia Ying Kuo; Tin Yau Edwin Lai; et al.

13
claims
26
verbatim quotes
0
citations
3
research areas
✓
Open access · cc-by-nc-nd

Abstract

TOPLESS (TPL) and TOPLESS-Related (TPR) corepressors are key regulatory proteins that interact with a variety of transcription factors to form specific complexes, thereby modulating a wide range of signaling pathways and metabolic processes. This study explored the function of the rice TPR gene OsTPR1. Transgenic rice lines overexpressing OsTPR1 (OsTPR1-Ox) exhibited reduced lateral root density, whereas OsTPR1 RNA interference lines (OsTPR1-Ri) showed increased lateral root density. To gain further insight, these transgenic lines were crossed with the DR5::GUS auxin reporter line. In 7-day-old seedlings, lateral root formation occurred in the differentiation zone of seminal roots, with GUS staining prominently localized in the lateral root primordia of the DR5::GUS/OsTPR1-Ri line. Similar results were observed in 45-day-old seedlings, where the DR5::GUS/OsTPR1-Ri line exhibited stronger GUS staining and a higher number of lateral roots in the crown root differentiation zones. In contrast, the DR5::GUS/OsTPR1-Ox line showed weaker GUS signals and fewer lateral roots. Additionally, the expression levels of several auxin efflux transporter genes encoding PIN-FORMED (PIN) proteins, including OsPIN1a, OsPIN1b, OsPIN1c, OsPIN2, and OsPIN5a, were increased in the OsTPR1-Ri line but decreased in the OsTPR1-Ox line. These results suggest that OsTPR1 also modulates the expression of multiple OsPIN genes, thereby potentially influencing auxin responses and lateral root development. Beyond root development, OsTPR1 overexpression led to a significant increase in tiller angle and a delay in flowering time, whereas OsTPR1-Ri plants exhibited earlier flowering. These findings indicate that OsTPR1 acts as a negative regulator of the auxin response, with its overexpression leading to reduced auxin sensitivity and altered plant architecture. Our results show that OsTPR1 modulates lateral root development, tiller angle, and flowering time, contributing to the coordinated growth and development in rice.

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Claims 13

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsTPR1 overexpression reduced lateral root density.

Treatment
overexpressing OsTPR1e0
Gene
OsTPR1e0
Outcome
lateral root densitye0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Transgenic rice lines overexpressing OsTPR1 (OsTPR1-Ox) exhibited reduced lateral root density”

✓ located verbatim in the source · abstract, characters 304–398 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

OsTPR1 RNA interference increased lateral root density.

Treatment
OsTPR1 RNA interferencee0
Gene
OsTPR1e0
Outcome
lateral root densitye0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsTPR1 RNA interference lines (OsTPR1-Ri) showed increased lateral root density”

✓ located verbatim in the source · abstract, characters 408–487 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In seven-day seedlings, GUS staining was prominent in lateral root primordia of the RNA interference reporter line.

Material
DR5::GUS/OsTPR1-Rie0
Organ / stage
lateral root primordiae0
Outcome
GUS staining prominently localized in the lateral root primordiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In 7-day-old seedlings, lateral root formation occurred in the differentiation zone of seminal roots, with GUS staining prominently localized in the lateral root primordia of the DR5::GUS/OsTPR1-Ri line”

✓ located verbatim in the source · abstract, characters 589–791 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

At 45 days, the RNA interference reporter line had stronger GUS staining in crown root differentiation zones.

Material
DR5::GUS/OsTPR1-Rie0
Organ / stage
crown root differentiation zonese0
Outcome
GUS staininge0
Direction
strongere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the DR5::GUS/OsTPR1-Ri line exhibited stronger GUS staining and a higher number of lateral roots in the crown root differentiation zones”

✓ located verbatim in the source · abstract, characters 854–990 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

At 45 days, the RNA interference reporter line had more lateral roots in crown root differentiation zones.

Material
DR5::GUS/OsTPR1-Rie0
Outcome
number of lateral rootse0
Direction
highere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the DR5::GUS/OsTPR1-Ri line exhibited stronger GUS staining and a higher number of lateral roots in the crown root differentiation zones”

✓ located verbatim in the source · abstract, characters 854–990 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The OsTPR1 overexpression reporter line showed weaker GUS signals.

Material
DR5::GUS/OsTPR1-Oxe0
Outcome
GUS signalse0
Direction
weakere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the DR5::GUS/OsTPR1-Ox line showed weaker GUS signals and fewer lateral roots”

✓ located verbatim in the source · abstract, characters 1005–1082 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The OsTPR1 overexpression reporter line showed fewer lateral roots.

Material
DR5::GUS/OsTPR1-Oxe0
Outcome
lateral rootse0
Direction
fewere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the DR5::GUS/OsTPR1-Ox line showed weaker GUS signals and fewer lateral roots”

✓ located verbatim in the source · abstract, characters 1005–1082 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The RNA interference line increased expression of five named OsPIN genes.

Material
OsTPR1-Rie0
Gene
OsPIN1a, OsPIN1b, OsPIN1c, OsPIN2, and OsPIN5ae0
Outcome
expression levelse0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the expression levels of several auxin efflux transporter genes encoding PIN-FORMED (PIN) proteins, including OsPIN1a, OsPIN1b, OsPIN1c, OsPIN2, and OsPIN5a, were increased in the OsTPR1-Ri line”

✓ located verbatim in the source · abstract, characters 1098–1292 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The overexpression line decreased expression of the named OsPIN genes.

Material
OsTPR1-Oxe0
Gene
OsPIN1a, OsPIN1b, OsPIN1c, OsPIN2, and OsPIN5ae0
Outcome
expression levelse0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the expression levels of several auxin efflux transporter genes encoding PIN-FORMED (PIN) proteins, including OsPIN1a, OsPIN1b, OsPIN1c, OsPIN2, and OsPIN5a, were increased in the OsTPR1-Ri line but decreased in the OsTPR1-Ox line”

✓ located verbatim in the source · abstract, characters 1098–1328 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

OsTPR1 overexpression significantly increased tiller angle.

Treatment
OsTPR1 overexpressione0
Gene
OsTPR1e0
Outcome
tiller anglee0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsTPR1 overexpression led to a significant increase in tiller angle and a delay in flowering time”

✓ located verbatim in the source · abstract, characters 1522–1619 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsTPR1 overexpression delayed flowering.

Treatment
OsTPR1 overexpressione0
Gene
OsTPR1e0
Outcome
flowering timee0
Direction
delaye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsTPR1 overexpression led to a significant increase in tiller angle and a delay in flowering time”

✓ located verbatim in the source · abstract, characters 1522–1619 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsTPR1 RNA interference produced earlier flowering.

Material
OsTPR1-Rie0
Outcome
floweringe0
Direction
earliere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsTPR1-Ri plants exhibited earlier flowering”

✓ located verbatim in the source · abstract, characters 1629–1673 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors interpret OsTPR1 as a negative regulator of auxin response.

Gene
OsTPR1e0
Outcome
auxin responsee0
Qualifier
negative regulatore0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsTPR1 acts as a negative regulator of the auxin response, with its overexpression leading to reduced auxin sensitivity”

✓ located verbatim in the source · abstract, characters 1704–1823 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 87–91 · show in text ↑

loss of function · growth · Oryza sativa (rice)Positive and negative results

132 papers: 28 positive, 104 negative or no effect

27 papers in the same direction as this paper · 104 in the opposite direction

  1. negative
  2. negative
  3. negative

128 papers more in this group

See all 132 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.