Paper · 2025 · Legume Research - An International Journal

Identification of Salt-responsive Genes in Melatonin Regulated Alfalfa Salt Tolerance by Transcriptome Analysis

Xiangling Ren; Wenxuan Zhu; Zirui Liu; et al.

12
claims
25
verbatim quotes
0
citations
2
research areas
✓
Open access · cc-by

Abstract

Background: Salt stress is a major limiting factor for alfalfa yield due to its relatively low salt tolerance. High soil salinity adversely impacts alfalfa growth and development, leading to reduced yield. Melatonin (MT) is known to play a significant role in enhancing plant resistance to abiotic stresses. However, the mechanisms underlying melatonin-mediated abiotic stress responses, particularly salt stress, are not well understood. To address this gap, we conducted a study focusing on germinating alfalfa seeds under salt stress. Methods: Physiological indexes and transcriptomics analyses were carried out on the germinated seeds to investigate the effects of melatonin on alfalfa seedlings under salt stress conditions. Result: Our results revealed that the application of melatonin led to an increase in shoot length and fresh weight of alfalfa seedlings under salt stress. Moreover, key physiological indexes such as peroxidase (POD) activity and glutathione (GSH) content were increased, while content of malondialdehyde and superoxide anions decreased. Transcriptomic analysis identified a total of 2,131 differentially expressed genes (DEGs) in the salt-treated group, with 726 up-regulated and 1,405 down-regulated genes, while the MT-treated group showed 2,896 DEGs, of which 1,097 were up-regulated and 1,799 were down-regulated. Further, KEGG enrichment analysis highlighted the enrichment of DEGs in pathways including flavonoid biosynthesis, ABC transporter, glutathione metabolism and the MAPK signaling pathway, with these pathways more significantly enriched in the MT-treated group. These findings collectively indicate that melatonin plays a crucial role in the response of alfalfa to salt stress and provide new insights into melatonin mediated gene expression of alfalfa salt tolerance.

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Claims 12

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Melatonin application under salt stress increased shoot length and fresh weight of alfalfa seedlings.

Taxon
alfalfaMedicago sativae1
Organ / stage
seedlingse1
Treatment
application of melatonine1
Outcome
shoot length and fresh weighte1
Direction
increasee1
Qualifier
under salt stresse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e1

“Our results revealed that the application of melatonin led to an increase in shoot length and fresh weight of alfalfa seedlings under salt stress”

✓ located verbatim in the source · abstract, characters 738–883 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Melatonin under salt stress increased peroxidase (POD) activity and glutathione (GSH) content in alfalfa seedlings.

Taxon
alfalfaMedicago sativae3
Organ / stage
seedlingse3
Treatment
melatonine3
Outcome
peroxidase (POD) activity and glutathione (GSH) contente2
Direction
increasede2
Qualifier
under salt stress conditionse3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e2

“key physiological indexes such as peroxidase (POD) activity and glutathione (GSH) content were increased”

✓ located verbatim in the source · abstract, characters 895–999 · show in text ↑
e3

“to investigate the effects of melatonin on alfalfa seedlings under salt stress conditions”

✓ located verbatim in the source · abstract, characters 639–728 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Melatonin under salt stress decreased malondialdehyde and superoxide anion contents in alfalfa seedlings.

Taxon
alfalfaMedicago sativae3
Organ / stage
seedlingse3
Treatment
melatonine3
Outcome
content of malondialdehyde and superoxide anionse4
Direction
decreasede4
Qualifier
under salt stress conditionse3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e4

“content of malondialdehyde and superoxide anions decreased”

✓ located verbatim in the source · abstract, characters 1007–1065 · show in text ↑
e3

“to investigate the effects of melatonin on alfalfa seedlings under salt stress conditions”

✓ located verbatim in the source · abstract, characters 639–728 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Transcriptome analysis identified 2,131 differentially expressed genes in the salt-treated group of germinating alfalfa seeds.

Taxon
alfalfaMedicago sativae6
Organ / stage
germinating alfalfa seedse6
Treatment
salt-treated groupe5
Outcome
differentially expressed genes (DEGs)e5
Value
2,131e5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e5

“identified a total of 2,131 differentially expressed genes (DEGs) in the salt-treated group”

✓ located verbatim in the source · abstract, characters 1091–1182 · show in text ↑
e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In the salt-treated group 726 genes were up-regulated among the differentially expressed genes of germinating alfalfa seeds.

Taxon
alfalfaMedicago sativae6
Organ / stage
germinating alfalfa seedse6
Treatment
salt-treated groupe5
Outcome
DEGse5
Direction
up-regulatede7
Value
726e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e5

“identified a total of 2,131 differentially expressed genes (DEGs) in the salt-treated group”

✓ located verbatim in the source · abstract, characters 1091–1182 · show in text ↑
e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
e7

“with 726 up-regulated and 1,405 down-regulated genes”

✓ located verbatim in the source · abstract, characters 1184–1236 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In the salt-treated group 1,405 genes were down-regulated among the differentially expressed genes of germinating alfalfa seeds.

Taxon
alfalfaMedicago sativae6
Organ / stage
germinating alfalfa seedse6
Treatment
salt-treated groupe5
Outcome
DEGse5
Direction
down-regulatede7
Value
1,405e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e5

“identified a total of 2,131 differentially expressed genes (DEGs) in the salt-treated group”

✓ located verbatim in the source · abstract, characters 1091–1182 · show in text ↑
e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
e7

“with 726 up-regulated and 1,405 down-regulated genes”

✓ located verbatim in the source · abstract, characters 1184–1236 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The MT-treated group showed 2,896 differentially expressed genes in germinating alfalfa seeds.

Taxon
alfalfaMedicago sativae6
Organ / stage
germinating alfalfa seedse6
Treatment
MT-treated groupe7
Outcome
DEGse7
Value
2,896e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
e7

“the MT-treated group showed 2,896 DEGs, of which 1,097 were up-regulated and 1,799 were down-regulated”

✓ located verbatim in the source · abstract, characters 1244–1346 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In the MT-treated group 1,097 genes were up-regulated among the differentially expressed genes of germinating alfalfa seeds.

Taxon
alfalfaMedicago sativae6
Organ / stage
germinating alfalfa seedse6
Treatment
MT-treated groupe7
Outcome
DEGse7
Direction
up-regulatede7
Value
1,097e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
e7

“the MT-treated group showed 2,896 DEGs, of which 1,097 were up-regulated and 1,799 were down-regulated”

✓ located verbatim in the source · abstract, characters 1244–1346 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In the MT-treated group 1,799 genes were down-regulated among the differentially expressed genes of germinating alfalfa seeds.

Taxon
alfalfaMedicago sativae6
Organ / stage
germinating alfalfa seedse6
Treatment
MT-treated groupe7
Outcome
DEGse7
Direction
down-regulatede7
Value
1,799e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
e7

“the MT-treated group showed 2,896 DEGs, of which 1,097 were up-regulated and 1,799 were down-regulated”

✓ located verbatim in the source · abstract, characters 1244–1346 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

KEGG enrichment analysis showed enrichment of DEGs in flavonoid biosynthesis, ABC transporter and glutathione metabolism pathways in alfalfa.

Taxon
alfalfaMedicago sativae6
Organ / stage
germinating alfalfa seedse6
Outcome
enrichment of DEGse7
Qualifier
flavonoid biosynthesis, ABC transporter, glutathione metabolisme7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
e7

“KEGG enrichment analysis highlighted the enrichment of DEGs in pathways including flavonoid biosynthesis, ABC transporter, glutathione metabolism and the MAPK signaling pathway”

✓ located verbatim in the source · abstract, characters 1357–1533 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

KEGG enrichment analysis showed enrichment of DEGs in the MAPK signaling pathway in alfalfa.

Taxon
alfalfaMedicago sativae6
Organ / stage
germinating alfalfa seedse6
Outcome
enrichment of DEGse7
Qualifier
the MAPK signaling pathwaye7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
e7

“KEGG enrichment analysis highlighted the enrichment of DEGs in pathways including flavonoid biosynthesis, ABC transporter, glutathione metabolism and the MAPK signaling pathway”

✓ located verbatim in the source · abstract, characters 1357–1533 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

The pathways were more significantly enriched in the MT-treated group than otherwise.

Taxon
alfalfaMedicago sativae6
Treatment
MT-treated groupe7
Outcome
these pathwayse7
Direction
more significantly enrichede7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e6

“germinating alfalfa seeds under salt stress”

✓ located verbatim in the source · abstract, characters 493–536 · show in text ↑
e7

“these pathways more significantly enriched in the MT-treated group”

✓ located verbatim in the source · abstract, characters 1540–1606 · show in text ↑

melatonin · growth · Medicago sativa (alfalfa)Results differ

15 papers: 14 positive, 1 negative or no effect

13 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
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melatonin · physiology: antioxidant enzymes · Medicago sativa (alfalfa)Results agree

8 papers: 8 positive, 0 negative or no effect

7 papers in the same direction as this paper

  1. positive
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4 papers more in this group

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melatonin · physiology: oxidative · Medicago sativa (alfalfa)Results agree

14 papers: 14 positive, 0 negative or no effect

13 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

10 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.