Paper · 2024 · Agriculture

Transcriptomic Analysis of Melatonin-Mediated Salt Stress Response in Germinating Alfalfa

Zirui Liu; Xiangling Ren; Wenxuan Zhu; et al.

8
claims
16
verbatim quotes
7
citations
2
research areas
✓
Open access · cc-by

Abstract

Salt stress poses a significant threat to crop yields worldwide. Melatonin (MT), an endogenous hormone synthesized in plants, has emerged as a crucial player in plant responses to various abiotic stresses, including drought, salinity, heat, and cold. However, the precise molecular mechanisms underlying MT-mediated abiotic stress responses remain incompletely understood. To elucidate the key genes and pathways involved in MT-mediated alleviation of salt stress, we conducted physiological, biochemical, and transcriptomic analyses on alfalfa seedlings. Our results demonstrated that alfalfa seedlings treated with melatonin exhibited higher germination rates, longer bud lengths, and greater fresh weights compared to those subjected to salt stress alone. Furthermore, the levels of malondialdehyde (MDA) and superoxide anion (O2−) were reduced, while the activities and contents of antioxidant enzymes such as superoxide dismutase (SOD), peroxidase (POD), and glutathione (GSH) increased in response to melatonin treatment. Transcriptome analysis revealed 2181 differentially expressed genes (DEGs) in the salt-treated group, with 780 upregulated and 1401 downregulated genes. In contrast, the MT-treated group exhibited 4422 DEGs, including 1438 upregulated and 2984 downregulated genes. Functional annotation and pathway enrichment analysis indicated that DEGs were primarily involved in the biosynthesis of flavonoids, isoflavones, plant hormones, glutathione (GSH), soluble sugars, and other substances, as well as in ABC transporter and MAPK signaling pathways. Notably, the MT-treated group showed greater enrichment of DEGs in these pathways, suggesting that MT mitigates salt stress by modulating the expression of genes related to phytohormones and antioxidant capacity. Overall, our findings provide valuable insights into the molecular mechanisms underlying MT-mediated salt tolerance in alfalfa, with important implications for breeding salt-tolerant alfalfa and other crops.

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Claims 8

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Alfalfa seedlings treated with melatonin showed higher germination rates, longer bud lengths and greater fresh weights than seedlings under salt stress alone.

Taxon
alfalfaMedicago sativae0
Treatment
melatonine0
Outcome
germination rates, longer bud lengths, and greater fresh weightse0
Direction
highere0
Comparator
salt stress alonee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“alfalfa seedlings treated with melatonin exhibited higher germination rates, longer bud lengths, and greater fresh weights compared to those subjected to salt stress alone”

✓ located verbatim in the source · abstract, characters 586–757 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Levels of malondialdehyde and superoxide anion were reduced by melatonin treatment.

Taxon
AlfalfaMedicago sativat0
Treatment
melatonin treatmente1
Outcome
levels of malondialdehyde (MDA) and superoxide anion (O2−)e0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“the levels of malondialdehyde (MDA) and superoxide anion (O2−) were reduced”

✓ located verbatim in the source · abstract, characters 772–847 · show in text ↑
e1

“melatonin treatment”

✓ located verbatim in the source · abstract, characters 1007–1026 · show in text ↑
t0

“Alfalfa”

✓ located verbatim in the source · title, characters 82–89 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Activities and contents of antioxidant enzymes such as SOD, POD and GSH increased with melatonin treatment.

Taxon
AlfalfaMedicago sativat0
Treatment
melatonin treatmente0
Outcome
activities and contents of antioxidant enzymese0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“the activities and contents of antioxidant enzymes such as superoxide dismutase (SOD), peroxidase (POD), and glutathione (GSH) increased in response to melatonin treatment”

✓ located verbatim in the source · abstract, characters 855–1026 · show in text ↑
t0

“Alfalfa”

✓ located verbatim in the source · title, characters 82–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The salt-treated group had 2181 differentially expressed genes, 780 upregulated and 1401 downregulated.

Taxon
AlfalfaMedicago sativat0
Treatment
salt-treated groupe0
Outcome
differentially expressed genes (DEGs)e0
Value
2181e0
Qualifier
780 upregulated and 1401 downregulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“Transcriptome analysis revealed 2181 differentially expressed genes (DEGs) in the salt-treated group, with 780 upregulated and 1401 downregulated genes”

✓ located verbatim in the source · abstract, characters 1028–1179 · show in text ↑
t0

“Alfalfa”

✓ located verbatim in the source · title, characters 82–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The melatonin-treated group had 4422 DEGs, 1438 upregulated and 2984 downregulated.

Taxon
AlfalfaMedicago sativat0
Treatment
MT-treated groupe0
Outcome
DEGse0
Value
4422e0
Qualifier
1438 upregulated and 2984 downregulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“the MT-treated group exhibited 4422 DEGs, including 1438 upregulated and 2984 downregulated genes”

✓ located verbatim in the source · abstract, characters 1194–1291 · show in text ↑
t0

“Alfalfa”

✓ located verbatim in the source · title, characters 82–89 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

DEGs were primarily involved in biosynthesis of flavonoids, isoflavones, plant hormones, GSH and soluble sugars, and in ABC transporter and MAPK signaling pathways.

Taxon
AlfalfaMedicago sativat0
Outcome
biosynthesis of flavonoids, isoflavones, plant hormones, glutathione (GSH), soluble sugarse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“DEGs were primarily involved in the biosynthesis of flavonoids, isoflavones, plant hormones, glutathione (GSH), soluble sugars, and other substances, as well as in ABC transporter and MAPK signaling pathways”

✓ located verbatim in the source · abstract, characters 1362–1569 · show in text ↑
t0

“Alfalfa”

✓ located verbatim in the source · title, characters 82–89 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The melatonin-treated group showed greater enrichment of DEGs in these pathways.

Taxon
AlfalfaMedicago sativat0
Treatment
MT-treated groupe0
Outcome
enrichment of DEGse0
Direction
greatere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“the MT-treated group showed greater enrichment of DEGs in these pathways”

✓ located verbatim in the source · abstract, characters 1580–1652 · show in text ↑
t0

“Alfalfa”

✓ located verbatim in the source · title, characters 82–89 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors suggest melatonin mitigates salt stress by modulating expression of genes related to phytohormones and antioxidant capacity.

Taxon
AlfalfaMedicago sativat0
Treatment
MTe0
Gene
genes related to phytohormones and antioxidant capacitye0
Outcome
mitigates salt stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“MT mitigates salt stress by modulating the expression of genes related to phytohormones and antioxidant capacity”

✓ located verbatim in the source · abstract, characters 1670–1782 · show in text ↑
t0

“Alfalfa”

✓ located verbatim in the source · title, characters 82–89 · show in text ↑

melatonin · growth · Medicago sativa (alfalfa)Results differ

15 papers: 14 positive, 1 negative or no effect

13 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. positive
  3. negative

11 papers more in this group

See all 15 papers →

melatonin · physiology: antioxidant enzymes · Medicago sativa (alfalfa)Results agree

8 papers: 8 positive, 0 negative or no effect

7 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

4 papers more in this group

See all 8 papers →

melatonin · physiology: oxidative · Medicago sativa (alfalfa)Results agree

14 papers: 14 positive, 0 negative or no effect

13 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

10 papers more in this group

See all 14 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.