Paper · 2025 · Journal of Genetic Engineering and Biotechnology

Genome-wide identification and evolutionary analysis of SUT genes reveals key regulators of drought stress response in finger millet (Eleusine coracana)

Kasinathan Rakkammal; Pandiyan Muthuramalingam; Hyunsuk Shin; et al.

9
claims
18
verbatim quotes
1
citations
2
research areas
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Open access · cc-by

Abstract

Sucrose transporters (SUTs) mediate sucrose movement across plant membranes, playing a crucial role in carbon allocation and stress responses. Although finger millet (Eleusine coracana) is known for its inherent drought resistance, the specific involvement of SUT genes in this characteristic is still unclear. This study aimed to identify the SUT genes of millet and to assess their expression in drought conditions. Five SUT genes (EcSUT1-EcSUT5) were identified that encode proteins with 9-12 transmembrane domains. Phylogenetic analysis clustered these SUT members across all three main SUT groups, suggesting an evolutionary divergence within the family. Synteny analysis revealed conserved genomic regions, with EcSUT2 showing 91-94% identity with orthologs in closely related grasses. Structural models further confirmed their typical transmembrane architecture. Interaction analysis identified EcSUT2 as a key interaction with SWEET transporters. Furthermore, the promoter regions of EcSUT2 and EcSUT5 were found to be enriched with hormone and stress-responsive elements. Under drought conditions, EcSUT1-EcSUT4 displayed transient induction, while EcSUT5 showed sustained upregulation, especially in the roots, notably after 48 h. The finger millet SUT family exhibits evolutionary conservation within grasses, with individual genes that play different roles in stress response. The persistent upregulation of EcSUT5 under drought strongly suggests its involvement in maintaining sucrose transport during long-term adverse conditions. This candidate gene requires further functional validation to uncover the stress dynamics for sustainable crop improvement.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Five EcSUT genes encode proteins with 9-12 transmembrane domains.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Gene
EcSUT1-EcSUT5e0
Outcome
9-12 transmembrane domainse0
Value
9-12 transmembrane domainse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Five SUT genes (EcSUT1-EcSUT5) were identified that encode proteins with 9-12 transmembrane domains”

✓ located verbatim in the source · abstract, characters 418–517 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The SUT members clustered across all three main SUT groups.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Outcome
clustered these SUT members across all three main SUT groupse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Phylogenetic analysis clustered these SUT members across all three main SUT groups”

✓ located verbatim in the source · abstract, characters 519–601 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Synteny revealed conserved regions and 91-94% identity of EcSUT2 with grass orthologs.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Gene
EcSUT2e0
Outcome
identity with orthologse0
Value
91-94%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Synteny analysis revealed conserved genomic regions, with EcSUT2 showing 91-94% identity with orthologs in closely related grasses”

✓ located verbatim in the source · abstract, characters 660–790 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Structural models confirmed typical transmembrane architecture.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Outcome
typical transmembrane architecturee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Structural models further confirmed their typical transmembrane architecture”

✓ located verbatim in the source · abstract, characters 792–868 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

EcSUT2 interacted with SWEET transporters.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Gene
EcSUT2e0
Outcome
interaction with SWEET transporterse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Interaction analysis identified EcSUT2 as a key interaction with SWEET transporters”

✓ located verbatim in the source · abstract, characters 870–953 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

EcSUT2 and EcSUT5 promoters were enriched with hormone and stress-responsive elements.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Gene
EcSUT2 and EcSUT5e0
Outcome
hormone and stress-responsive elementse0
Direction
enrichede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the promoter regions of EcSUT2 and EcSUT5 were found to be enriched with hormone and stress-responsive elements”

✓ located verbatim in the source · abstract, characters 968–1079 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

EcSUT1-EcSUT4 showed transient induction under drought.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Treatment
drought conditionse0
Gene
EcSUT1-EcSUT4e0
Outcome
transient inductione0
Direction
inductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Under drought conditions, EcSUT1-EcSUT4 displayed transient induction”

✓ located verbatim in the source · abstract, characters 1081–1150 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

EcSUT5 showed sustained upregulation under drought, particularly in roots after 48 h.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Organ / stage
rootse0
Gene
EcSUT5e0
Outcome
sustained upregulatione0
Direction
upregulatione0
Qualifier
after 48 he0

Not reportedTreatmentComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“EcSUT5 showed sustained upregulation, especially in the roots, notably after 48 h”

✓ located verbatim in the source · abstract, characters 1158–1239 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Persistent EcSUT5 upregulation suggests a role in maintaining sucrose transport during long-term adverse conditions.

Taxon
finger millet (Eleusine coracana)Eleusine coracanat0
Gene
EcSUT5e0
Outcome
maintaining sucrose transporte0
Qualifier
under droughte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Eleusine coracana
Eleusine coracana · TaxonAgnieszka Kwiecień, Nova · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The persistent upregulation of EcSUT5 under drought strongly suggests its involvement in maintaining sucrose transport during long-term adverse conditions”

✓ located verbatim in the source · abstract, characters 1389–1543 · show in text ↑
t0

“finger millet (Eleusine coracana)”

✓ located verbatim in the source · title, characters 119–152 · show in text ↑